Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d007038_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:220641794:220647166:1 gene:Zm00001d007038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

ATGAGCAGCATAGGCACAGGTTACGATCTGTCTGTCACCACCTTCTCCCCAGATGGTCGT
GTCTTCCAGGTCGAATATGCTACCAAGGCCGTCGACAACAGCGGGACTGTTGTTGGGATC
AAGTGCAAAGATGGCATTGTCCTGGGTGTTGAGAAGCTGGTAACCTCAAAGATGATGCTG
GAAGGGTCAAACCGGAGGATCCATTCAGTGCACCGGCACTCTGGCTTGGCTGTTGCTGGT
TTAGCAGCAGATGGCAGGCAAATTGTTTCAAGGACGAAGTCAGAAGCTGCCAGTTATGAA
AAGGTCTATGGAGAACCCATTCCTGTTAAGGAATTGGCTGATCGTGTGGCAAGTTATGTT
CATCTTTGCACGCTGTACTGGTGGCTCAGGCCTTTTGGCTGCGGTGTTATTCTTGGAGGT
TATGATAGGGATGGGCCACAGCTCTACATGATAGAACCCTCAGGAGTTTCTTATAAATAC
TTTGGTGCTGCATTAGGGAAGGGGAGACAGGCTGCAAAAACTGAGATAGAAAAGTTGAAA
CTTTCAGAGCTTACGTGCCGGGAAGGCATTGTTGAAGTTGCAAAGATAATTTATGGAGTG
CATGACGAAGCGAAGGATAAAGCTTTCGAGTTGGAGTTGAGCTGGATCTGCGATGAATCG
AACCACCAGCATCAGAAGGTTCCAAATGAACTGTTGGAGCATGCCAAAGCTGCTGCCCAG
GCTGCTCTTGAGGAGATGGATGCCGACTAA

Peptide Sequence

PEP ID

Zm00001d007038_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:220641794:220647166:1 gene:Zm00001d007038 transcript:Zm00001d007038_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML
EGSNRRIHSVHRHSGLAVAGLAADGRQIVSRTKSEAASYEKVYGEPIPVKELADRVASYV
HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLK
LSELTCREGIVEVAKIIYGVHDEAKDKAFELELSWICDESNHQHQKVPNELLEHAKAAAQ
AALEEMDAD

Transcript Sequence

Transcript ID

Zm00001d007038_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:220641794:220647166:1 gene:Zm00001d007038 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

AGGTCGGGCGTGGGCCAACGTAAAAAGAGTGACGTTTCTTCACCAATCACCCTGCGTTTC
TTCTCCTGTTCATCACCCGTGCGTGCGCTCTCTCTCTTTCTCGTGCGGCAACTGCGAGGC
CGCCGACGCCCGACGGCAGGGTGCCCAGGCCTTCTTCGGTCCCATCGCGAGGCCATAGTT
GCATCATTCGCCTGAGACGACTGCCCACCGCCAGGACTGATCTCCTCACTAGGCGCGTAG
AGGTGAAGAGAATAACTTGACAATGAGCAGCATAGGCACAGGTTACGATCTGTCTGTCAC
CACCTTCTCCCCAGATGGTCGTGTCTTCCAGGTCGAATATGCTACCAAGGCCGTCGACAA
CAGCGGGACTGTTGTTGGGATCAAGTGCAAAGATGGCATTGTCCTGGGTGTTGAGAAGCT
GGTAACCTCAAAGATGATGCTGGAAGGGTCAAACCGGAGGATCCATTCAGTGCACCGGCA
CTCTGGCTTGGCTGTTGCTGGTTTAGCAGCAGATGGCAGGCAAATTGTTTCAAGGACGAA
GTCAGAAGCTGCCAGTTATGAAAAGGTCTATGGAGAACCCATTCCTGTTAAGGAATTGGC
TGATCGTGTGGCAAGTTATGTTCATCTTTGCACGCTGTACTGGTGGCTCAGGCCTTTTGG
CTGCGGTGTTATTCTTGGAGGTTATGATAGGGATGGGCCACAGCTCTACATGATAGAACC
CTCAGGAGTTTCTTATAAATACTTTGGTGCTGCATTAGGGAAGGGGAGACAGGCTGCAAA
AACTGAGATAGAAAAGTTGAAACTTTCAGAGCTTACGTGCCGGGAAGGCATTGTTGAAGT
TGCAAAGATAATTTATGGAGTGCATGACGAAGCGAAGGATAAAGCTTTCGAGTTGGAGTT
GAGCTGGATCTGCGATGAATCGAACCACCAGCATCAGAAGGTTCCAAATGAACTGTTGGA
GCATGCCAAAGCTGCTGCCCAGGCTGCTCTTGAGGAGATGGATGCCGACTAAGAGACACG
ATGATTTGCCCAAACTTGGTGTTTTCGGTGGTGTTGATATCTCTGATCCCTTGGGGGGGG
GGGGACCCACTAGGGGTAGGCACATTTCAACCGAAAACCGAGCCGAACTGGAATCAAGGT
TTTTTCGGTTTTTCGATTCGGTGTCGGTTTTCCTTTCTTACGAACCGAAAAGATCGGCTC
GGCTTCGGTTTCTATTTGCTGGACACCGATACAACCGAACTTACTGCAGTCTAATGTCCT
GTGTGGCGCGCGTT