Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d007029_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:220383422:220388738:-1 gene:Zm00001d007029 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	ATGGGGCTTTGCCATGGCAAGCCGACGCAAATCCCGGAGGCCGAGGCGGAGGAGGATCCC CATGTAGCCTCCGGAGCGGGTGACAGTGGGGACGGGCCGACCTCGCCGTCGGCGGCCGCG CCCACGGCGAAGCCGGGCACGCCGAAGCAGCCCAAGTTCCCGTTCTACCTGCCGAGCCCG CTCCCGCCGTCCAGCTACAAGGGCTCGCCGGCGAACTCGAGCGTCGCGTCCACGCCGGCG CGCGGCGGGTTCAAGCGCCCTTTCCCACCGCCGTCGCCCGCCAAGCACATCCGCGCTCTC CTCGCGCGGCGGCACGGCTCGGTCAAGCCCAACGAGGCGTCCATCCCCGAGGGCGGCGAG CCGGAGCTCGGCCTGGACAAGAGCTTCGGCTTCTCGAAGCACTTCTTCGCAAAGTACGAC CTCGGCGAGGAGGTCGGCCGCGGTCACTTCGGCTACACGTGCTCCGCCAAGGCCAAGAAG GGCGAGCACAAGGGCCAGGACGTAGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACA GCTATCGCCATTGAAGATGTGAGAAGAGAAGTGAGAATATTGAGTTCTCTGACAGGCCAC AGTAATTTAGTGCAGTTCTACGATGCTTTCGAGGATGAAGATAACGTGTATATAGTTATG GAATTATGTAAAGGAGGTGAACTGCTGGACAGGATATTGGCTAGAGGTGGAAAGTACTCT GAAGAGGATGCGAAGGTCGTTATGGTACAAATTTTGAGTGTTGTATCATTTTGCCATCTT CAAGGTGTTGTTCACCGTGATCTGAAACCAGAGAATTTCCTTTTCTCTTCAAAGGATGAA AACTCTCCCTTGAAGGTCATAGATTTTGGCTTGTCTGACTTTGTGAAGCCAGATGAAAGA CTAAACGACATTGTTGGAAGCGCATACTATGTTGCTCCAGAGGTCCTCCACAGATCTTAT GCCACCGAGGCAGATATGTGGAGCATTGGAGTAATTGCCTACATCTTGCTCTGTGGGAGT AGGCCTTTCTGGGCGCGCACGGAGTCGGGAATCTTCCGAGCTGTCTTGAAGGCGGAACCG AGTTTTGATGAGGCCCCATGGCCCACTCTCACGGCTGAAGCTAAAGATTTTGTAAAAAGG CTTCTTAACAAGGATTACCGCAAGAGAATGACGGCTGCACAAGCTCTCAGTCATCCATGG ATCCGTAATTCTCAACAAGTGAAGGTTCCTTTGGATATGATAATCTATAAGCTAATGAGA GCGTACATCAGCTCGTCTTCGCTGCGGAAGTCTGCTTTGAGGGCCCTAGCCAAGACGCTG ACGACGGACCAACTCTTTTATGTGAGGGAGCAGTTTGAATTGCTGGGCCCGAACAAGAAT GGTTACATCTCATTGCAAAATCTGAAATCGGCTCTAGCGAAGAACTCCACGGATGCAATG AAGGACTCCAGGGTTGTCGATTTTGTTAACACCTACAGGAAACTGGATTTCGAAGAGTTC GCCGCTTCCGCCATCAGCGTCTACCAGATGGAAGCCCTGGAGACCTGGGAGCAGCACGCG AGGCGCGCGTACGAGCTGTTCGACAAGGAAGGAAACCGGCCCATTGTGATCGAGGAACTT GCGTCGGAGCTCGGACTTGGCCCGTCAGTGCCTCTCCACGTTGTCCTCCAAGACTGGGTC AGACACGCCGACGGGAAGCTGAGCTTCCTGGGGTTCATCAAGCTCTTGCACGGGGTCTCG TCGCGCTCGATCCCAAAGGCCTAG

Peptide Sequence

PEP ID	Zm00001d007029_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:220383422:220388738:-1 gene:Zm00001d007029 transcript:Zm00001d007029_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	MGLCHGKPTQIPEAEAEEDPHVASGAGDSGDGPTSPSAAAPTAKPGTPKQPKFPFYLPSP LPPSSYKGSPANSSVASTPARGGFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGGE PELGLDKSFGFSKHFFAKYDLGEEVGRGHFGYTCSAKAKKGEHKGQDVAVKVIPKAKMTT AIAIEDVRREVRILSSLTGHSNLVQFYDAFEDEDNVYIVMELCKGGELLDRILARGGKYS EEDAKVVMVQILSVVSFCHLQGVVHRDLKPENFLFSSKDENSPLKVIDFGLSDFVKPDER LNDIVGSAYYVAPEVLHRSYATEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEP SFDEAPWPTLTAEAKDFVKRLLNKDYRKRMTAAQALSHPWIRNSQQVKVPLDMIIYKLMR AYISSSSLRKSALRALAKTLTTDQLFYVREQFELLGPNKNGYISLQNLKSALAKNSTDAM KDSRVVDFVNTYRKLDFEEFAASAISVYQMEALETWEQHARRAYELFDKEGNRPIVIEEL ASELGLGPSVPLHVVLQDWVRHADGKLSFLGFIKLLHGVSSRSIPKA

Transcript Sequence

Transcript ID	Zm00001d007029_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:220383422:220388738:-1 gene:Zm00001d007029 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 1
Sequence	GGAGAAAAAGAGAGGAGCTCAAAAGCAAGGCGAGGCCTCCTCCGCCCCTTTTTCTCCCCT CCCAATTCACACAGGATTCTTCACTCGCCCGCCCAGTTGTTTCTTTTAGTGCCGCCCCCA TTCCGCTCTGATCCGAGCCTTTCGCTCAAAGCCTCCAGCTTTTGCAATTGTTTGGTCACT TCGGGAATCAAGGAATAAGTTCTTGCGCTGTGCGCGATAGAGAGCCTGATCCATCTTTCC CCATCCTCTTCCCGTGGCATTTCGGTGTGCTTGCGCTCTGTGCGTGGCCACTGCAAGGGG AGGATTTTTGGCCTGGTTTCTGTCTTCTTGGGGTTCCAAAATTTCGGGCGAGATCTTAGC CTCAAGGAGGTTCCTTGCTTTTCTGGTATTGGCGACTCTTGTTGCTCCCTACAAGTCCAA GAAAAGAATTTGGAGGCCATGGTGGGGGTCCCTTGCGACCAGTTCTGGTCGATTATTCGT GCTGTTGAATTCAATATGCCGCTGTGACCCACCTCTGCCTGGTTTCTTGGAGGAAATTTG CTTCAATTGGGCGTCGTTGAGCTAGAGCTCTCCTCCAGCTCTTGATTCGGTCCATGGGGC TTTGCCATGGCAAGCCGACGCAAATCCCGGAGGCCGAGGCGGAGGAGGATCCCCATGTAG CCTCCGGAGCGGGTGACAGTGGGGACGGGCCGACCTCGCCGTCGGCGGCCGCGCCCACGG CGAAGCCGGGCACGCCGAAGCAGCCCAAGTTCCCGTTCTACCTGCCGAGCCCGCTCCCGC CGTCCAGCTACAAGGGCTCGCCGGCGAACTCGAGCGTCGCGTCCACGCCGGCGCGCGGCG GGTTCAAGCGCCCTTTCCCACCGCCGTCGCCCGCCAAGCACATCCGCGCTCTCCTCGCGC GGCGGCACGGCTCGGTCAAGCCCAACGAGGCGTCCATCCCCGAGGGCGGCGAGCCGGAGC TCGGCCTGGACAAGAGCTTCGGCTTCTCGAAGCACTTCTTCGCAAAGTACGACCTCGGCG AGGAGGTCGGCCGCGGTCACTTCGGCTACACGTGCTCCGCCAAGGCCAAGAAGGGCGAGC ACAAGGGCCAGGACGTAGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACAGCTATCG CCATTGAAGATGTGAGAAGAGAAGTGAGAATATTGAGTTCTCTGACAGGCCACAGTAATT TAGTGCAGTTCTACGATGCTTTCGAGGATGAAGATAACGTGTATATAGTTATGGAATTAT GTAAAGGAGGTGAACTGCTGGACAGGATATTGGCTAGAGGTGGAAAGTACTCTGAAGAGG ATGCGAAGGTCGTTATGGTACAAATTTTGAGTGTTGTATCATTTTGCCATCTTCAAGGTG TTGTTCACCGTGATCTGAAACCAGAGAATTTCCTTTTCTCTTCAAAGGATGAAAACTCTC CCTTGAAGGTCATAGATTTTGGCTTGTCTGACTTTGTGAAGCCAGATGAAAGACTAAACG ACATTGTTGGAAGCGCATACTATGTTGCTCCAGAGGTCCTCCACAGATCTTATGCCACCG AGGCAGATATGTGGAGCATTGGAGTAATTGCCTACATCTTGCTCTGTGGGAGTAGGCCTT TCTGGGCGCGCACGGAGTCGGGAATCTTCCGAGCTGTCTTGAAGGCGGAACCGAGTTTTG ATGAGGCCCCATGGCCCACTCTCACGGCTGAAGCTAAAGATTTTGTAAAAAGGCTTCTTA ACAAGGATTACCGCAAGAGAATGACGGCTGCACAAGCTCTCAGTCATCCATGGATCCGTA ATTCTCAACAAGTGAAGGTTCCTTTGGATATGATAATCTATAAGCTAATGAGAGCGTACA TCAGCTCGTCTTCGCTGCGGAAGTCTGCTTTGAGGGCCCTAGCCAAGACGCTGACGACGG ACCAACTCTTTTATGTGAGGGAGCAGTTTGAATTGCTGGGCCCGAACAAGAATGGTTACA TCTCATTGCAAAATCTGAAATCGGCTCTAGCGAAGAACTCCACGGATGCAATGAAGGACT CCAGGGTTGTCGATTTTGTTAACACCTACAGGAAACTGGATTTCGAAGAGTTCGCCGCTT CCGCCATCAGCGTCTACCAGATGGAAGCCCTGGAGACCTGGGAGCAGCACGCGAGGCGCG CGTACGAGCTGTTCGACAAGGAAGGAAACCGGCCCATTGTGATCGAGGAACTTGCGTCGG AGCTCGGACTTGGCCCGTCAGTGCCTCTCCACGTTGTCCTCCAAGACTGGGTCAGACACG CCGACGGGAAGCTGAGCTTCCTGGGGTTCATCAAGCTCTTGCACGGGGTCTCGTCGCGCT CGATCCCAAAGGCCTAGCATTGTACACCATCCATCCATCGTCGTTGTTGTTGTAGTTGTA CTGAAGTAAAGCTGTTGTGTAGACGAGTGTACAGATGAGGATAGGGAAAAGAAATGAACA TGATGGAAGACTGGAAGGGCCGTAAGATTTGCGGCTGCTGTT