Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006947_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:219989864:219991904:-1 gene:Zm00001d006947 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP709C14

Sequence

ATGGGACTGGCCTGGATGGTGACGGCGGCCGTCGCGGCGGTGCTGGCGTCGTGGGCGTTC
AACGCGCTGGTTCACCTCGTCTGGCGTCCCTACGCCATCACCCGGAGGCTCCGCGCGCAG
GGCGTGCGCGGGCCGCCCTACACGTTCTTCACCGGGAGCCTCGGCGAGATCAAGCGGCTC
CGCGCCAAGGGCGCCACCGTCACGCTGGACGTCGACGACCACGACTTCATCCCCATGGTG
CAGCCCCATCTGCGCAAATGGATCGCGCTCTACGGGCGGACGTTCGTGTACTGGACCGGC
GCGAGGCCGAACGTGTGCGTGGCGGACGTGAACGTGGTCAGGCAGGTGCTCTTCGACCGC
ACCGGCCTCTACCCCAAGAACCTCATGAACCCGCACATCTCCCGCCTGCTCGGCAAGGGC
CTCGTCCTCACCGACGGCAACGACTGGAAGCGCCACCGCAAGGTCGTGCACCCGGCCTTC
AACATGGACAAGCTCAAGCTGATGACGGCGACCATGTCCGACTGCGCTCGCTCGATGATC
TCCGAGTGGGACGCACAGCTGCAGAAGGAGGAGAGCGGGCGCGACGGTCACGGCCACGGC
CACGTGGAGGAAGAGCTGAGCAGCCGCTTCGAGGAGCTCACCGCCGACGTCATCTCGCAC
ACCGCGTTCGGGAGCAGCTACAGCGAGGGGAAGCGGGTCTTCCTGGCGCAGAGGAAGCTG
CAGCACATCGCCTTCTCCACCATTTTCAACGTCCAGATCCCAGCTCTCAAGTACCTCCCG
ACCGAGAAGAATCTCAGGACACGGAAGCTGGACAGGCAGGTGAGGGCCATGCTAATGGAC
ATCATCGAGGCCCGCCTCGCCAGCAAGGACACCGCCGGCGGCTACGGGAACGACCTGCTC
GGGCTCATGCTGGAGGCGTGCGCGCCGCCACCGGAGCACCATGGCGAGATGGCGCCGACC
ACGCTGAGCATGGACGAGATCGTCGACGAGTGCAAGACCTTCTTCTTCGCCGGCCACGAC
ACCACGTCGCACCTGCTCACCTGGGCCTCCTTCCTGCTGAGCACGCACCCGGAGTGGCAG
CACAGGCTACGGGACGAGGTCCGGCGGGAGTGCGGCGACGACGAGGTCCCCACCGGCGAC
GCCCTCAACAGGCTGAAGCTTGTCAACATGTTCCTCCTGGAGACCCTGAGGCTGTACGGC
CCGGTGTCCCTGATCCAGAGGAAGGCGGGCTCAGATCTCGACCTCGGCGGCATCCGGGTA
CCCGAGGGCGCGATCCTGACCATTCCGATCGCCACGATCCACCGCGACAAGGAGGTCTGG
GGCGAGGACGCCGGCGAGTTCAGGCCGGAGAGGTTCGAGAACGGGGTGACGAGGGCGGCC
AAGCACCCCAACGCGCTGCTGTCCTTCTCCAGCGGGCCAAGGTCGTGCATCGGTCAGAAC
TTCGCAATGATCGAGGCAAAGGCCGTGGTCGCCATGATCCTGCAGAGGTTTGCACTCGAG
CTGTCCCCGAAATACGTCCACGCGCCCATGGACTTGATCACCCTGCGCCCAAGGCATGGG
CTCCCCATGCTCCTCAAGCGACTGTAG

Peptide Sequence

PEP ID

Zm00001d006947_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:219989864:219991904:-1 gene:Zm00001d006947 transcript:Zm00001d006947_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP709C14

Sequence

MGLAWMVTAAVAAVLASWAFNALVHLVWRPYAITRRLRAQGVRGPPYTFFTGSLGEIKRL
RAKGATVTLDVDDHDFIPMVQPHLRKWIALYGRTFVYWTGARPNVCVADVNVVRQVLFDR
TGLYPKNLMNPHISRLLGKGLVLTDGNDWKRHRKVVHPAFNMDKLKLMTATMSDCARSMI
SEWDAQLQKEESGRDGHGHGHVEEELSSRFEELTADVISHTAFGSSYSEGKRVFLAQRKL
QHIAFSTIFNVQIPALKYLPTEKNLRTRKLDRQVRAMLMDIIEARLASKDTAGGYGNDLL
GLMLEACAPPPEHHGEMAPTTLSMDEIVDECKTFFFAGHDTTSHLLTWASFLLSTHPEWQ
HRLRDEVRRECGDDEVPTGDALNRLKLVNMFLLETLRLYGPVSLIQRKAGSDLDLGGIRV
PEGAILTIPIATIHRDKEVWGEDAGEFRPERFENGVTRAAKHPNALLSFSSGPRSCIGQN
FAMIEAKAVVAMILQRFALELSPKYVHAPMDLITLRPRHGLPMLLKRL

Transcript Sequence

Transcript ID

Zm00001d006947_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:219989864:219991904:-1 gene:Zm00001d006947 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 CYP709C14

Sequence

AACCTCACCTTCAAGCGTCAAGTAGCAAAACTACAGCTTTCCTTCACCCCCAGCAAGAAA
ACCGAGCGATCTAGCAGACTACCACAGAAGATTTCCTACTCGGCCGCACGTGCAGACCCT
GATCTGACTGAGAGAGGCAGGCAGCAGCTCGATCGGCAGTAACCGTGAGCGAGCCATGGG
ACTGGCCTGGATGGTGACGGCGGCCGTCGCGGCGGTGCTGGCGTCGTGGGCGTTCAACGC
GCTGGTTCACCTCGTCTGGCGTCCCTACGCCATCACCCGGAGGCTCCGCGCGCAGGGCGT
GCGCGGGCCGCCCTACACGTTCTTCACCGGGAGCCTCGGCGAGATCAAGCGGCTCCGCGC
CAAGGGCGCCACCGTCACGCTGGACGTCGACGACCACGACTTCATCCCCATGGTGCAGCC
CCATCTGCGCAAATGGATCGCGCTCTACGGGCGGACGTTCGTGTACTGGACCGGCGCGAG
GCCGAACGTGTGCGTGGCGGACGTGAACGTGGTCAGGCAGGTGCTCTTCGACCGCACCGG
CCTCTACCCCAAGAACCTCATGAACCCGCACATCTCCCGCCTGCTCGGCAAGGGCCTCGT
CCTCACCGACGGCAACGACTGGAAGCGCCACCGCAAGGTCGTGCACCCGGCCTTCAACAT
GGACAAGCTCAAGCTGATGACGGCGACCATGTCCGACTGCGCTCGCTCGATGATCTCCGA
GTGGGACGCACAGCTGCAGAAGGAGGAGAGCGGGCGCGACGGTCACGGCCACGGCCACGT
GGAGGAAGAGCTGAGCAGCCGCTTCGAGGAGCTCACCGCCGACGTCATCTCGCACACCGC
GTTCGGGAGCAGCTACAGCGAGGGGAAGCGGGTCTTCCTGGCGCAGAGGAAGCTGCAGCA
CATCGCCTTCTCCACCATTTTCAACGTCCAGATCCCAGCTCTCAAGTACCTCCCGACCGA
GAAGAATCTCAGGACACGGAAGCTGGACAGGCAGGTGAGGGCCATGCTAATGGACATCAT
CGAGGCCCGCCTCGCCAGCAAGGACACCGCCGGCGGCTACGGGAACGACCTGCTCGGGCT
CATGCTGGAGGCGTGCGCGCCGCCACCGGAGCACCATGGCGAGATGGCGCCGACCACGCT
GAGCATGGACGAGATCGTCGACGAGTGCAAGACCTTCTTCTTCGCCGGCCACGACACCAC
GTCGCACCTGCTCACCTGGGCCTCCTTCCTGCTGAGCACGCACCCGGAGTGGCAGCACAG
GCTACGGGACGAGGTCCGGCGGGAGTGCGGCGACGACGAGGTCCCCACCGGCGACGCCCT
CAACAGGCTGAAGCTTGTCAACATGTTCCTCCTGGAGACCCTGAGGCTGTACGGCCCGGT
GTCCCTGATCCAGAGGAAGGCGGGCTCAGATCTCGACCTCGGCGGCATCCGGGTACCCGA
GGGCGCGATCCTGACCATTCCGATCGCCACGATCCACCGCGACAAGGAGGTCTGGGGCGA
GGACGCCGGCGAGTTCAGGCCGGAGAGGTTCGAGAACGGGGTGACGAGGGCGGCCAAGCA
CCCCAACGCGCTGCTGTCCTTCTCCAGCGGGCCAAGGTCGTGCATCGGTCAGAACTTCGC
AATGATCGAGGCAAAGGCCGTGGTCGCCATGATCCTGCAGAGGTTTGCACTCGAGCTGTC
CCCGAAATACGTCCACGCGCCCATGGACTTGATCACCCTGCGCCCAAGGCATGGGCTCCC
CATGCTCCTCAAGCGACTGTAGGTTTCATTCGATCATGGTGCGCGTCAGATAGATGTGAA
ATTAATAGGAGTTTTGTATTTGTTGCTTATATATTTCCGTTTATTTTTGCTACTTATATG
TACCCACATAATGTATGTCAATAGGACTTTTGTATTTGTTGCTTATATATTTCCATTTAT
TTTTGCTACT