Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006943_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:219963606:219965438:1 gene:Zm00001d006943 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	ATGCGCTCGCGGGGAGGCGGCGCGGCGGCGTGGCCGGAGCACCTGGCCGCGCACGCGCGC CTCCTCAAGTCGGCGTGCCCGGACGCGTTCCTCCTCACCACCGCGATGCGGGGCTACCTC CGCGCGTGCCTCCCGCTGCAAGCCCTGCTCTTGCTTCGCTCGGTCCTGCCGCGGGCGCCC CGCCTCCTCGACAACTCCTTCTCGCTCTCCCTAGCGATGCAGGCATCCGCCGCGCTCTCG GCCTCCGTTCCGGCTATGCGTGACCTCGGCCTCGGCGCTGCGTCCCTCCACGCGCGCGCG CTCAAGTCCGGCTTCGCCGCAGCCGACCTCTTCGTGCGCACCGCGCTCGTCGAGGCTTAC GCCAAGGCGGGGCGCGCGGACCTCGCGCGCGCCGCTTTCGACGAGGCGCCGCGCAGGGAC GTGTTCCTCTGCAACGTCATGCTCGCGGCATACGTTACGCGTGGCGAGGTTGCGGAGGCG AGGAGAGTGTTCGATGGAATGCGCGAGAGGGACATGGTCTCTTGGAACACGATGATCCAT GGGTATGCGGTGAATGGGGAGGTCGACCTGGCGAGAGAGGTGTTCAACGGCATGGACGAC AGGGATGCCTTCTCGTGGAGCTCCATGATGTCGGCGTACACCAAGGGGCGGAGGTCCAAG GATGCGCTGGAGCTGTGGCGGGAGATGCGCGCGGCCTGTGTCAACCCGGACTGCACCACC ATGGTGAGCGTGCTCTCGGCGTGCAGTGATATGGGGGCGCTTGCTGTTGGTGCTGAAGTG CATCAGTTTGTGGAGAGCAATGGGGTTGAATTGGATGTCAAGCTTGGGACCGCTCTGATC GACATGTATGCCAAGTGCGGTGACATTGAGAATTCAGTAAGAGTGTTCCACTCTATGCCA GTGAAGGATGTGCTGACTTGGAGCTCGATGATCATCGGGTTGGCCAATCATGGGTTCGGC CATGATGCTCTCTCCTTGTTCTCAAGGATGCTATCAGAAGGACTGCAACCAAATGAGGTT ACCTTCATTGGAGTTCTTATATCATGTACTCATCTTGGTCTTGTGAGCGATGGCAAGAAA TATTTCAGCTCAATGAGTGTAGTGCATGGTGTAACCCCTAAGGTTCAGCACTATGGATGC ATGGTTGATCTTTTGGGGCGATCAGGTCATATTGAGGAGGCAAAGCAGCTTATCAGGGAC ATGCCATTCGAGCCAGATGCAGTCATCTGGAGGGCACTTCTAGGGGCTTGTCGCATCTAC AAGAATGTAGAAGTTGCAGAGGAAGCTATGGCGAAACTGCGAGTATTGGATCCTCATGCC GATGGGCACTATGTCTTACTGTCAAACATATATGCACAGGCGAATTCCTGGGAAGGTGTT GCAGAGATGAGGAGGACGCTTAGGAGGGAGAGAATCCAGAGAATTCCTGGAAGAAGCTCG ATTGAATGGCAGAATACAATTCACGAGTTTATTTCTGGTGATAGATCGCATCCAAGGTCC AAGGAGATCTACAAAATGTTGGGAGAGATGATGGATCGCTTAAGGCAAGCTGGATATAAG CCAATGACAGGTTTAGTGTTGCAAGACATTGATGAGCAATCTAAGGAACGTGCACTGGCT GAACATAGTGAGAAGCTGGCAGTTGCTTTTGGGCTGCTAACCACTCCTGCAGGGTCAACT CTCCGAATAACAAAAAATCTCAGAGCTTGTGAAGACTGCCATTCAGCTATTAAGCTTATT GCCCTGTTATACGAGCGCAAGTTGATTATTAGAGACCGTAACCGTTTCCACCATTTCAGT GAAGGACGGTGCTCATGCAAGGACTACTGGTGA

Peptide Sequence

PEP ID	Zm00001d006943_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:219963606:219965438:1 gene:Zm00001d006943 transcript:Zm00001d006943_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	MRSRGGGAAAWPEHLAAHARLLKSACPDAFLLTTAMRGYLRACLPLQALLLLRSVLPRAP RLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEAY AKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMIH GYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTT MVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMP VKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKK YFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIY KNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSS IEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALA EHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFS EGRCSCKDYW

Transcript Sequence

Transcript ID	Zm00001d006943_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:219963606:219965438:1 gene:Zm00001d006943 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial
Sequence	ATGCGCTCGCGGGGAGGCGGCGCGGCGGCGTGGCCGGAGCACCTGGCCGCGCACGCGCGC CTCCTCAAGTCGGCGTGCCCGGACGCGTTCCTCCTCACCACCGCGATGCGGGGCTACCTC CGCGCGTGCCTCCCGCTGCAAGCCCTGCTCTTGCTTCGCTCGGTCCTGCCGCGGGCGCCC CGCCTCCTCGACAACTCCTTCTCGCTCTCCCTAGCGATGCAGGCATCCGCCGCGCTCTCG GCCTCCGTTCCGGCTATGCGTGACCTCGGCCTCGGCGCTGCGTCCCTCCACGCGCGCGCG CTCAAGTCCGGCTTCGCCGCAGCCGACCTCTTCGTGCGCACCGCGCTCGTCGAGGCTTAC GCCAAGGCGGGGCGCGCGGACCTCGCGCGCGCCGCTTTCGACGAGGCGCCGCGCAGGGAC GTGTTCCTCTGCAACGTCATGCTCGCGGCATACGTTACGCGTGGCGAGGTTGCGGAGGCG AGGAGAGTGTTCGATGGAATGCGCGAGAGGGACATGGTCTCTTGGAACACGATGATCCAT GGGTATGCGGTGAATGGGGAGGTCGACCTGGCGAGAGAGGTGTTCAACGGCATGGACGAC AGGGATGCCTTCTCGTGGAGCTCCATGATGTCGGCGTACACCAAGGGGCGGAGGTCCAAG GATGCGCTGGAGCTGTGGCGGGAGATGCGCGCGGCCTGTGTCAACCCGGACTGCACCACC ATGGTGAGCGTGCTCTCGGCGTGCAGTGATATGGGGGCGCTTGCTGTTGGTGCTGAAGTG CATCAGTTTGTGGAGAGCAATGGGGTTGAATTGGATGTCAAGCTTGGGACCGCTCTGATC GACATGTATGCCAAGTGCGGTGACATTGAGAATTCAGTAAGAGTGTTCCACTCTATGCCA GTGAAGGATGTGCTGACTTGGAGCTCGATGATCATCGGGTTGGCCAATCATGGGTTCGGC CATGATGCTCTCTCCTTGTTCTCAAGGATGCTATCAGAAGGACTGCAACCAAATGAGGTT ACCTTCATTGGAGTTCTTATATCATGTACTCATCTTGGTCTTGTGAGCGATGGCAAGAAA TATTTCAGCTCAATGAGTGTAGTGCATGGTGTAACCCCTAAGGTTCAGCACTATGGATGC ATGGTTGATCTTTTGGGGCGATCAGGTCATATTGAGGAGGCAAAGCAGCTTATCAGGGAC ATGCCATTCGAGCCAGATGCAGTCATCTGGAGGGCACTTCTAGGGGCTTGTCGCATCTAC AAGAATGTAGAAGTTGCAGAGGAAGCTATGGCGAAACTGCGAGTATTGGATCCTCATGCC GATGGGCACTATGTCTTACTGTCAAACATATATGCACAGGCGAATTCCTGGGAAGGTGTT GCAGAGATGAGGAGGACGCTTAGGAGGGAGAGAATCCAGAGAATTCCTGGAAGAAGCTCG ATTGAATGGCAGAATACAATTCACGAGTTTATTTCTGGTGATAGATCGCATCCAAGGTCC AAGGAGATCTACAAAATGTTGGGAGAGATGATGGATCGCTTAAGGCAAGCTGGATATAAG CCAATGACAGGTTTAGTGTTGCAAGACATTGATGAGCAATCTAAGGAACGTGCACTGGCT GAACATAGTGAGAAGCTGGCAGTTGCTTTTGGGCTGCTAACCACTCCTGCAGGGTCAACT CTCCGAATAACAAAAAATCTCAGAGCTTGTGAAGACTGCCATTCAGCTATTAAGCTTATT GCCCTGTTATACGAGCGCAAGTTGATTATTAGAGACCGTAACCGTTTCCACCATTTCAGT GAAGGACGGTGCTCATGCAAGGACTACTGGTGA