Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006936_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:219725578:219733085:1 gene:Zm00001d006936 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 64
Sequence

ATGGCCAAGGTTGCCGCCCTGACGATCACCTTGCTCGGGCTCCTGGTGTCCGTGACATGC
CAGGGCAGCACTTACCCTGCTCAGCAGCAGCAGGAGGCTTCGTCGTCGTCGTCTAGCCCT
GGTTGCATTCTGCGAGGGTGGATCCCGTTCTTGCCTCCTTGCCGCGACGACCAAGCCCCA
ACGCCAAACCCTCTCCCTCCTCCCTCAGGGGCAGGGCTCACCGTGGGCTACTACAAGAAC
TGCCCTGGCGCTGAAGGTATCGTGAGGGAGGCCGTGGAGAAGGCCATGGACAACGGAAAC
CGCGGCATTGGCGCAGGACTCGTTCGTATCTTCTTCCACGACTGCTTTGTTCGGCCGAAC
GAGTTCGGTTTGGGTGACAATGGAGGGAAAAAACCCAAAAGTGATATTCATGAAAGTGGG
AAGGTCCCTCTGATTCCTGTAAATCAGAAAACATCTTCCTCTGAGTTTAAAGAAGCAATG
TTTGCTACAGATCCACAAACCAATGAATGTGACAAATGCAATGAAGAGGGGGAAAATCTG
GGGGATGAAAACAATGAGAAGGTAGACTTTGAAGACAGTGATGAAGACCTTCTTAGTTCC
CAAGAGCTTAACAACTTTGTGAAAGGAATGGGTGTTGAGATAGCGGATGAGCAGGAATTG
GAGATGGATGAGGGTGAACTCCTCAAAGTTCAAGATGAGCAACAAACTGGTAAGGATAAA
AAAGGTAAAGCCAAGTTGGGGTGCGATGCTTCCGTTCTCCTGAGGAACACCAGCGGCTCC
AGCAACCAGACGGAGATGTTCGGCCTGCCCAACATAAACAGCCTCCGCGGGTTCCAGGTC
ATCGACGACGCCAAGGCCGAGCTCGAGAAGGCATGCCCCCGCACGGTGTCGTGCGCAGAC
ATCGTCGCCTTCGCCGCACGCGACGCCACGCGCAACCTCAGCTACGGCGCCATCGACTTC
CAGATGCCGGCGGGACGCCTGGACGGCCGCGTGTCCCTCAAGGAGGAGGCCGAGAAGAAC
CTCCCGGGTCCGTTCGACAGCCTCGACGACCTCCAGAAGAGCTTCGCTGCCCAGGGCCTC
GGCTTCAACGACATGGTCACGCTCTCCGGCGCGCACAGCATCGGCGTGGCCCGCTGCAGG
TTCTTCACCAACCGCCTGCCGCCTAACCCCTCGGACATGGACCGCGACCTCGCCAGGAGC
CTAAAGGCGACCTGCGACCAAAACGGACTCGACTCCAAGGTGGTGCAGGACCCCGTGACG
CCAGTTGCCCTGGACAACCAGTACTATAAGAACGTGCACAACGGCAAGGTGCTCTTCACG
TCGGACGCCGCGCTCAACTCCACTGACGACGCAAGGAAGGTGGTGGACGGCTTCGCCAAC
AACGCGGTAGACTGGTACCGCGCGTTCGCCGATGCCATGGTGAAGATGGGCAACATCAGG
GATAGGACCATCAACAGACCCAAGCCCGAGATCAGGGAGAAGTGCTTCATTTACAATACC
TACTGA

Peptide Sequence

PEP ID

Zm00001d006936_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:219725578:219733085:1 gene:Zm00001d006936 transcript:Zm00001d006936_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 64
Sequence

MAKVAALTITLLGLLVSVTCQGSTYPAQQQQEASSSSSSPGCILRGWIPFLPPCRDDQAP
TPNPLPPPSGAGLTVGYYKNCPGAEGIVREAVEKAMDNGNRGIGAGLVRIFFHDCFVRPN
EFGLGDNGGKKPKSDIHESGKVPLIPVNQKTSSSEFKEAMFATDPQTNECDKCNEEGENL
GDENNEKVDFEDSDEDLLSSQELNNFVKGMGVEIADEQELEMDEGELLKVQDEQQTGKDK
KGKAKLGCDASVLLRNTSGSSNQTEMFGLPNINSLRGFQVIDDAKAELEKACPRTVSCAD
IVAFAARDATRNLSYGAIDFQMPAGRLDGRVSLKEEAEKNLPGPFDSLDDLQKSFAAQGL
GFNDMVTLSGAHSIGVARCRFFTNRLPPNPSDMDRDLARSLKATCDQNGLDSKVVQDPVT
PVALDNQYYKNVHNGKVLFTSDAALNSTDDARKVVDGFANNAVDWYRAFADAMVKMGNIR
DRTINRPKPEIREKCFIYNTY

Transcript Sequence

Transcript ID

Zm00001d006936_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:219725578:219733085:1 gene:Zm00001d006936 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 64
Sequence

GAGCATAGGACGAGCTAGCAAGCACACGATCCATCTGCAACCAGCAGAGCGAGTACGTTG
CACTGCACGAGCGAAAAAAATGGCCAAGGTTGCCGCCCTGACGATCACCTTGCTCGGGCT
CCTGGTGTCCGTGACATGCCAGGGCAGCACTTACCCTGCTCAGCAGCAGCAGGAGGCTTC
GTCGTCGTCGTCTAGCCCTGGTTGCATTCTGCGAGGGTGGATCCCGTTCTTGCCTCCTTG
CCGCGACGACCAAGCCCCAACGCCAAACCCTCTCCCTCCTCCCTCAGGGGCAGGGCTCAC
CGTGGGCTACTACAAGAACTGCCCTGGCGCTGAAGGTATCGTGAGGGAGGCCGTGGAGAA
GGCCATGGACAACGGAAACCGCGGCATTGGCGCAGGACTCGTTCGTATCTTCTTCCACGA
CTGCTTTGTTCGGCCGAACGAGTTCGGTTTGGGTGACAATGGAGGGAAAAAACCCAAAAG
TGATATTCATGAAAGTGGGAAGGTCCCTCTGATTCCTGTAAATCAGAAAACATCTTCCTC
TGAGTTTAAAGAAGCAATGTTTGCTACAGATCCACAAACCAATGAATGTGACAAATGCAA
TGAAGAGGGGGAAAATCTGGGGGATGAAAACAATGAGAAGGTAGACTTTGAAGACAGTGA
TGAAGACCTTCTTAGTTCCCAAGAGCTTAACAACTTTGTGAAAGGAATGGGTGTTGAGAT
AGCGGATGAGCAGGAATTGGAGATGGATGAGGGTGAACTCCTCAAAGTTCAAGATGAGCA
ACAAACTGGTAAGGATAAAAAAGGTAAAGCCAAGTTGGGGTGCGATGCTTCCGTTCTCCT
GAGGAACACCAGCGGCTCCAGCAACCAGACGGAGATGTTCGGCCTGCCCAACATAAACAG
CCTCCGCGGGTTCCAGGTCATCGACGACGCCAAGGCCGAGCTCGAGAAGGCATGCCCCCG
CACGGTGTCGTGCGCAGACATCGTCGCCTTCGCCGCACGCGACGCCACGCGCAACCTCAG
CTACGGCGCCATCGACTTCCAGATGCCGGCGGGACGCCTGGACGGCCGCGTGTCCCTCAA
GGAGGAGGCCGAGAAGAACCTCCCGGGTCCGTTCGACAGCCTCGACGACCTCCAGAAGAG
CTTCGCTGCCCAGGGCCTCGGCTTCAACGACATGGTCACGCTCTCCGGCGCGCACAGCAT
CGGCGTGGCCCGCTGCAGGTTCTTCACCAACCGCCTGCCGCCTAACCCCTCGGACATGGA
CCGCGACCTCGCCAGGAGCCTAAAGGCGACCTGCGACCAAAACGGACTCGACTCCAAGGT
GGTGCAGGACCCCGTGACGCCAGTTGCCCTGGACAACCAGTACTATAAGAACGTGCACAA
CGGCAAGGTGCTCTTCACGTCGGACGCCGCGCTCAACTCCACTGACGACGCAAGGAAGGT
GGTGGACGGCTTCGCCAACAACGCGGTAGACTGGTACCGCGCGTTCGCCGATGCCATGGT
GAAGATGGGCAACATCAGGGATAGGACCATCAACAGACCCAAGCCCGAGATCAGGGAGAA
GTGCTTCATTTACAATACCTACTGATCGACACGATATCAACATTAAGACGTTCCACGAGA
TCCTGGAGGAGTCTGTTTGTTTTGATATTTTCCTCTTGCATTCATTATCATGCGATTGAT
TTCCCTTTTATTTGCATCCAAAAATGTCATGCTGAGATTTTTGTTGTAAAAGGACTTTGA
ATTCAAGCAATACATTTTATTTGTCCAC