Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006920_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:219357056:219360575:1 gene:Zm00001d006920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	ATGGTGCCGTGGGAAGGGTACGTCAGCGACGAGACGATGGGCACCTTCTCGCCCATCGTG CTCTACTGGCTGTACGCCGGCGGCTACCAGCTGATCCTTCACCGCCGGCCGCTTGAGCGG TACAGGCTCCACACGCGGGACGAGGAGGAGGAGAAGAACCTCGTCAGCCTCTCCACCGTC GTCCGTGGCGTACTCCTGCAGCAGCTCGTGCAGGCCATCGTCGCGATGATTTTGTTCATG GTGACTTCTGATAGCTCAATAACTGTTGTTCAGCCACCTATCGTCGTCCAGATCTTCCAG TTTCTAGTTGCAATGTTAGTGATGGACTCATGGCAGTACTTTGTGCACCGCTACATGCAC CAAAACAAGTTCCTGTATCGGCACATCCACTCGCAGCACCATCGGCTGATTGTCCCTTAC GCTATCGGGGCTCTGTACAACCACCCACTGGAGGGCCTGCTTCTGGACACCTTAGGAGGC GCCATCTCCTTCTTGGTCTCCGGCATGACGCCGAGGACCGCCATGTTCTTCTTCTGCTTC GCAGTCCTCAAGACGGTCGACGATCACTGCGGGCTTTGGCTACCGTATAACATCTTCCAG CACCTGTTTCAGAACAACACCGCCTATCACGACATCCACCACCAGCTGCAAGGAACCAAA TACAACTACTCCCAGCCATTCTTCTCGATCTGGGACAGAATGCTAGGAACCCACATGCCG TACGACTTAGTGAGCAGGAAAGAAGGTGGATTTGAAGCAAGGCCGTCGCGAGACTAG

Peptide Sequence

PEP ID	Zm00001d006920_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:219357056:219360575:1 gene:Zm00001d006920 transcript:Zm00001d006920_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	MVPWEGYVSDETMGTFSPIVLYWLYAGGYQLILHRRPLERYRLHTRDEEEEKNLVSLSTV VRGVLLQQLVQAIVAMILFMVTSDSSITVVQPPIVVQIFQFLVAMLVMDSWQYFVHRYMH QNKFLYRHIHSQHHRLIVPYAIGALYNHPLEGLLLDTLGGAISFLVSGMTPRTAMFFFCF AVLKTVDDHCGLWLPYNIFQHLFQNNTAYHDIHHQLQGTKYNYSQPFFSIWDRMLGTHMP YDLVSRKEGGFEARPSRD

Transcript Sequence

Transcript ID	Zm00001d006920_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:219357056:219360575:1 gene:Zm00001d006920 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	GACACGTTGGTCCTGTCACTGTTTGTGACACCCACGGTTGTCCTGTGGAGTGGGGGCTCT ATGAACTGCCATTTGTAAATTCTCCACTGTAGTCGTTGGCGGGGTCTGCTTCGTGTTTCT TACTTTGTTCTAGAGGAAAAAAAAGATCCCTAACCAGGAGACAAGGATCCACATGCAATA AATCTTCTCTTCTGTTCTGTTCTGGCACCTTCTTCCCAGATCAATAGGGGCGAGGCGACA CCAGCGAGGAGACGAAATCGTTTAAAGGCGCCAGCTTGTCTTCTGTTCCATTTGTGGTTT CATTTCCTCTGCAAACGATTTCCATTTTTTCTGCACGCCGTCAGCTGATCCTTTTCGCCG TAGTATCCCCGAGCAAAAGAGAAAACCCTTTTTTTTGTGCGCTGTGCTGTTTCGCCATCT CTGTTCGTCCCACCGAGGCACCGACTCAATCCCCATTCTTGGCATCTGGCTTCACAAAAC AAGACCGGTTCCCGTTCCCTAGATCTCTGCGTAGAGGCGGCGGCGAGGCACCTGAATCCG GCAAAAAAGGGTTCGCGGTTTGGTTGGGAGGAGCGCAGGAGCCCGGCGTCAAAACCCAAT CTTGGCGCCCGGGCTGCCGTGCGCCATCGTCTTCTCCCTGTGGTGTTTAGGGAGAGGAGA AGGCCGGTGGAGATGGTGCCGTGGGAAGGGTACGTCAGCGACGAGACGATGGGCACCTTC TCGCCCATCGTGCTCTACTGGCTGTACGCCGGCGGCTACCAGCTGATCCTTCACCGCCGG CCGCTTGAGCGGTACAGGCTCCACACGCGGGACGAGGAGGAGGAGAAGAACCTCGTCAGC CTCTCCACCGTCGTCCGTGGCGTACTCCTGCAGCAGCTCGTGCAGGCCATCGTCGCGATG ATTTTGTTCATGGTGACTTCTGATAGCTCAATAACTGTTGTTCAGCCACCTATCGTCGTC CAGATCTTCCAGTTTCTAGTTGCAATGTTAGTGATGGACTCATGGCAGTACTTTGTGCAC CGCTACATGCACCAAAACAAGTTCCTGTATCGGCACATCCACTCGCAGCACCATCGGCTG ATTGTCCCTTACGCTATCGGGGCTCTGTACAACCACCCACTGGAGGGCCTGCTTCTGGAC ACCTTAGGAGGCGCCATCTCCTTCTTGGTCTCCGGCATGACGCCGAGGACCGCCATGTTC TTCTTCTGCTTCGCAGTCCTCAAGACGGTCGACGATCACTGCGGGCTTTGGCTACCGTAT AACATCTTCCAGCACCTGTTTCAGAACAACACCGCCTATCACGACATCCACCACCAGCTG CAAGGAACCAAATACAACTACTCCCAGCCATTCTTCTCGATCTGGGACAGAATGCTAGGA ACCCACATGCCGTACGACTTAGTGAGCAGGAAAGAAGGTGGATTTGAAGCAAGGCCGTCG CGAGACTAGCTTGAAGTCATGGAAGTGTACAGGCTCCGGTGAATGAGTCAGACAGAATAT GGTTTTTTAGCTGTCATGGTTCATTTTTTAAAAATTTTGTGCAGGGCTGCCATTTACATT GCTGTGCAGATAGTGCATTTGAAAATCCACACTTCTGTATGTACCCAGTTATTTGTGTAA TTGATTGAACCTCTGGTCGTGATCGACACCTTCGGAGCAATCTTTGGCTACTACTGAC