Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006917_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:219340252:219344852:-1 gene:Zm00001d006917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive receptor kinase

Sequence

ATGGCCGCGCTACTCGCGTTCCTCCTCCTCCTGCTGCTGCTGCTCTCCGGGGGCGCCGCC
GGCGACGACGTGGCGGCGCTGCTCGAGTTCAAGAAGGGCATCGCGGGGCGAGACCGGGAC
AGGGTGCTGGGGTCCTGGTCGCGGCCCGCGACGACCGAGGCCGGCAGCGGCGGCGGGTGC
CCCGCGTCGTGGCGCGGCGTGGCGTGCGACGGCGGCGCGGTGGTCGGCGTGGCGCTCGAC
GGCCTCGGCCTGGGGGGCGAGCTCAAGCTCGCGACCCTCGCCGGCATGCGCGCGCTCCAG
AACCTCTCCCTCGCCGGGAACGCCTTCTCCGGCCGCCTGCCGCCCGGCATCGGCTCCCTC
TCCTCGCTGCGCCACCTCGACCTCTCCCGGAACCGCTTCTACGGGCCCGTCCCGGCCCGC
CTCGCCAACCTCTCGGGCCTCGTCCACCTCGACCTCTCCCGCAACAACTTCACCTCCGCC
TTCCCCACCGACGGGATCCAGCAGCTGCAGAACCTGCGCCGCGTCGACGTCCGCGGCAAC
AGCTTCTGGGGCAACGCCACCGACCTGCTCGCCAAGCTCCGCAACGCCGAGCACGTCGAC
CTCAGCGACAACCTCTTCACGGGGACCATCGATTTGGACCTCCGCAGCCTCTCCAGCATC
GGGAACACGGTCAGGTATCTCAACCTCAGCCACAACAACCTGGACGGGGGCTTCTTCCGG
AACGAGACGGTGGGCGCGTTCAAGAACTTGGCGGTCCTTGATTTGAGCAACAACGGGCTT
GCTGGCACAGTGCCGAGGCTCGATGCGTGGTTCTCGCTCGAGTTTTTCAGCGTTGCCGGG
AATGGGCTATTCGGGATGATGCCTGAGACACTCCTCCAGAATTCCATGCGGCTTGTCGAG
GTTGATCTCAGCAGGAACGGCTTCTCAGGGTCATTGCCGATTGTGAATTCTACGACTTTG
AAGGTGTTGAATCTCTCTTCAAATGTCTTATCAGGATCATTACCAGCCACCATGGGCAAA
TGTACCTCAGTTGATCTTAGTGGGAACCTGTTTTCAGGGGAATTAGCTATATTACGTTCC
TGGGATGGGATTGTTGAGGTCATTGACTTGAGCTCAAACAAATTGGTGGGAAGCTACCCA
AATGATGCCTCCCAGTTTCAGAACTTAGTGTCACTGAAATTACGAAACAATTCATTGTCA
GGGTCTCTCCCTTCGGTGTTGGGTACCTATCAGAAGTTATCTGTCCTTGATCTGAGTCAG
AACACCCTCGAGGGATCTGTGTTGCCTACTTTCTTCATGTCACCAACTTTGACTGTGTTA
AATCTTTCTGGAAATAAATTTTCTGGAACTATTCCATTTGAGAGCACCCATTCAACGGAA
TCAATACTTCTTTCATCTCAACCAGGTCTCAGGATTGTTGATCTGTCCAGCAATTCTTTG
ACTGGGCCATTGCCACCAGATATCTCGAACCTGCAAAAACTTGAGTTCCTCATTCTTATG
ATGAATGAATTATCTGGGGAGATTCCCAGTGAGATAAGCAAGCTTCAAGCACTGGAGTAT
ATTGACTTATCACACAACCACCTGACAGGCAGAATTCCGGATATGCCTCAAAATGGCCTG
AAGGTGTTCAATGTATCTTACAACAATCTACAAGGAACTGTTCCCAAAAGTATCGAAAAG
TTTCCTTTATCTTGCTTCCGACCTGGAAATGACATGTTAGTTTTCCCAGATGGCCTCCCT
GCTGGAAATGATGATTACACCGGAGTTTCTCAGGGCCAAACATCTCATGTACATAAGGCT
GGTGTTCGAGTTGCTCTTATTATTGGTTGCATTGGAGCTGTTTTGCTAGTTATCTTCATA
GCCCTAGCATTCTATGTGGTCAGGTCTCAAGAGCTTTGCGGAAGAAATGGATTTAGAAGT
CAGATCACTATCAGGGATCTGAAGGGGAGAATAAGCCCTCCAAATCTGTTCAAGCCCCCG
AAAGATAATGTGATACCAAGTAAAACAAGTTTCTCAAATGATCATCTCTTAAGAGCCGCA
GCTAGATCGATGTCTGCCCAGAAAGAGTTATTGGCTGAAGCCTCTGTTGAATATGGCTAC
ACTGATCCAAAGGAAGTTGCCGAGTCCACAAGTTTAGGTGTGACCGAGACTTCTTCTGCA
ATCCAGGCTCAGGAGTCTTCTCCACGGTCTGCATTGCCAACATCGCCACATTTTGCTGAT
TCTAGATTCCTTGAGGAACCTGTTGCTTTTGAAGTATACTCTCCAGACCGGCTGGCTGGA
GAATTGATCTTCATGGACAGCACTTTGGTTTTCACAGCTGAGGATCTGTCACGTGCACCG
GCGGAAGTTCTTGGAAGGAGCAGCCATGGAACAACGTATAAAGCTGTTCTACAAAGCGGG
CATGTCCTAACAGTGAAATGGCTGCGTGTCGGTCTTGTGAAGCATAAAAAGGAGTTCACA
AAGGAGATAAAGAGGATTGGCACTATCAGGAATCCAAATATAATTTCATGGAGAGCCTTC
TATTGGGGCCCTAAGGAGCAAGAGAGATTAATTATTTCTGACTATGTCAATGGTGATAGC
TTGGCACTTTACCTTTATGAGTCGACTCCAAGAAGATACTCCCGCCTATCGGTTCCTCAG
CGTCTCAGAATCGCCATCGACCTAGCCCGCTGCCTCCAGTTCCTACACCAGGAGAAGGGC
TTGCCGCACGGCAACTTGAAGCCAACTAACATATTCTTGGCTGGTCCTGACCTCTCTCCA
AAGCTGGTGGACTACGGCCTGCACAGGTTCATGACTCCAAGCGGCACCGCCGAGCAGATA
CTGAATCTAGGAGCGCTAGGGTACCGAGCCCCGGAGCTGGCGAACGCGGCCAAGCCCGCG
CCCACGTTCAAGGCGGACGTGTATGCGTTCGGGGTGATCGTCATGGAGATGCTGACACGG
AGGAGCGCTGGGGACATCATCTCGGGCCAGTCCGGCGCGGTCGACCTGACCGACTGGGTC
CAGATGTGCAGCAGGGAAGGGCGGGGCACTGACTGCTTCGACCGAGACATCGCCGGCCTG
GAAGAGTCCCCGAGGGTCATGGACGAGCTGCTGGCGGTCTCGCTTAGGTGCGTCCTCCCT
GTAAATGAGAGGCCTAGCATGAAGACGGTCTGCGATGACCTGTGCTCCATAACAGCGTGA

Peptide Sequence

PEP ID

Zm00001d006917_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:219340252:219344852:-1 gene:Zm00001d006917 transcript:Zm00001d006917_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive receptor kinase

Sequence

MAALLAFLLLLLLLLSGGAAGDDVAALLEFKKGIAGRDRDRVLGSWSRPATTEAGSGGGC
PASWRGVACDGGAVVGVALDGLGLGGELKLATLAGMRALQNLSLAGNAFSGRLPPGIGSL
SSLRHLDLSRNRFYGPVPARLANLSGLVHLDLSRNNFTSAFPTDGIQQLQNLRRVDVRGN
SFWGNATDLLAKLRNAEHVDLSDNLFTGTIDLDLRSLSSIGNTVRYLNLSHNNLDGGFFR
NETVGAFKNLAVLDLSNNGLAGTVPRLDAWFSLEFFSVAGNGLFGMMPETLLQNSMRLVE
VDLSRNGFSGSLPIVNSTTLKVLNLSSNVLSGSLPATMGKCTSVDLSGNLFSGELAILRS
WDGIVEVIDLSSNKLVGSYPNDASQFQNLVSLKLRNNSLSGSLPSVLGTYQKLSVLDLSQ
NTLEGSVLPTFFMSPTLTVLNLSGNKFSGTIPFESTHSTESILLSSQPGLRIVDLSSNSL
TGPLPPDISNLQKLEFLILMMNELSGEIPSEISKLQALEYIDLSHNHLTGRIPDMPQNGL
KVFNVSYNNLQGTVPKSIEKFPLSCFRPGNDMLVFPDGLPAGNDDYTGVSQGQTSHVHKA
GVRVALIIGCIGAVLLVIFIALAFYVVRSQELCGRNGFRSQITIRDLKGRISPPNLFKPP
KDNVIPSKTSFSNDHLLRAAARSMSAQKELLAEASVEYGYTDPKEVAESTSLGVTETSSA
IQAQESSPRSALPTSPHFADSRFLEEPVAFEVYSPDRLAGELIFMDSTLVFTAEDLSRAP
AEVLGRSSHGTTYKAVLQSGHVLTVKWLRVGLVKHKKEFTKEIKRIGTIRNPNIISWRAF
YWGPKEQERLIISDYVNGDSLALYLYESTPRRYSRLSVPQRLRIAIDLARCLQFLHQEKG
LPHGNLKPTNIFLAGPDLSPKLVDYGLHRFMTPSGTAEQILNLGALGYRAPELANAAKPA
PTFKADVYAFGVIVMEMLTRRSAGDIISGQSGAVDLTDWVQMCSREGRGTDCFDRDIAGL
EESPRVMDELLAVSLRCVLPVNERPSMKTVCDDLCSITA

Transcript Sequence

Transcript ID

Zm00001d006917_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:219340252:219344852:-1 gene:Zm00001d006917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable inactive receptor kinase

Sequence

CTCTCTCTCGCACATCTCACATTCTCACCACCACCACCTCCTCCTCTCTCTCCCATCTCC
AATGGCGGCCGCCACCCACACCTCCCCTTCCGGCTGCTCCGCCTCCGGCAAGCCCTAGCC
CTAGGCAGGCTGCTCCACTCCCCCACGCACACACCACACTTCTATGGCCGCGCTACTCGC
GTTCCTCCTCCTCCTGCTGCTGCTGCTCTCCGGGGGCGCCGCCGGCGACGACGTGGCGGC
GCTGCTCGAGTTCAAGAAGGGCATCGCGGGGCGAGACCGGGACAGGGTGCTGGGGTCCTG
GTCGCGGCCCGCGACGACCGAGGCCGGCAGCGGCGGCGGGTGCCCCGCGTCGTGGCGCGG
CGTGGCGTGCGACGGCGGCGCGGTGGTCGGCGTGGCGCTCGACGGCCTCGGCCTGGGGGG
CGAGCTCAAGCTCGCGACCCTCGCCGGCATGCGCGCGCTCCAGAACCTCTCCCTCGCCGG
GAACGCCTTCTCCGGCCGCCTGCCGCCCGGCATCGGCTCCCTCTCCTCGCTGCGCCACCT
CGACCTCTCCCGGAACCGCTTCTACGGGCCCGTCCCGGCCCGCCTCGCCAACCTCTCGGG
CCTCGTCCACCTCGACCTCTCCCGCAACAACTTCACCTCCGCCTTCCCCACCGACGGGAT
CCAGCAGCTGCAGAACCTGCGCCGCGTCGACGTCCGCGGCAACAGCTTCTGGGGCAACGC
CACCGACCTGCTCGCCAAGCTCCGCAACGCCGAGCACGTCGACCTCAGCGACAACCTCTT
CACGGGGACCATCGATTTGGACCTCCGCAGCCTCTCCAGCATCGGGAACACGGTCAGGTA
TCTCAACCTCAGCCACAACAACCTGGACGGGGGCTTCTTCCGGAACGAGACGGTGGGCGC
GTTCAAGAACTTGGCGGTCCTTGATTTGAGCAACAACGGGCTTGCTGGCACAGTGCCGAG
GCTCGATGCGTGGTTCTCGCTCGAGTTTTTCAGCGTTGCCGGGAATGGGCTATTCGGGAT
GATGCCTGAGACACTCCTCCAGAATTCCATGCGGCTTGTCGAGGTTGATCTCAGCAGGAA
CGGCTTCTCAGGGTCATTGCCGATTGTGAATTCTACGACTTTGAAGGTGTTGAATCTCTC
TTCAAATGTCTTATCAGGATCATTACCAGCCACCATGGGCAAATGTACCTCAGTTGATCT
TAGTGGGAACCTGTTTTCAGGGGAATTAGCTATATTACGTTCCTGGGATGGGATTGTTGA
GGTCATTGACTTGAGCTCAAACAAATTGGTGGGAAGCTACCCAAATGATGCCTCCCAGTT
TCAGAACTTAGTGTCACTGAAATTACGAAACAATTCATTGTCAGGGTCTCTCCCTTCGGT
GTTGGGTACCTATCAGAAGTTATCTGTCCTTGATCTGAGTCAGAACACCCTCGAGGGATC
TGTGTTGCCTACTTTCTTCATGTCACCAACTTTGACTGTGTTAAATCTTTCTGGAAATAA
ATTTTCTGGAACTATTCCATTTGAGAGCACCCATTCAACGGAATCAATACTTCTTTCATC
TCAACCAGGTCTCAGGATTGTTGATCTGTCCAGCAATTCTTTGACTGGGCCATTGCCACC
AGATATCTCGAACCTGCAAAAACTTGAGTTCCTCATTCTTATGATGAATGAATTATCTGG
GGAGATTCCCAGTGAGATAAGCAAGCTTCAAGCACTGGAGTATATTGACTTATCACACAA
CCACCTGACAGGCAGAATTCCGGATATGCCTCAAAATGGCCTGAAGGTGTTCAATGTATC
TTACAACAATCTACAAGGAACTGTTCCCAAAAGTATCGAAAAGTTTCCTTTATCTTGCTT
CCGACCTGGAAATGACATGTTAGTTTTCCCAGATGGCCTCCCTGCTGGAAATGATGATTA
CACCGGAGTTTCTCAGGGCCAAACATCTCATGTACATAAGGCTGGTGTTCGAGTTGCTCT
TATTATTGGTTGCATTGGAGCTGTTTTGCTAGTTATCTTCATAGCCCTAGCATTCTATGT
GGTCAGGTCTCAAGAGCTTTGCGGAAGAAATGGATTTAGAAGTCAGATCACTATCAGGGA
TCTGAAGGGGAGAATAAGCCCTCCAAATCTGTTCAAGCCCCCGAAAGATAATGTGATACC
AAGTAAAACAAGTTTCTCAAATGATCATCTCTTAAGAGCCGCAGCTAGATCGATGTCTGC
CCAGAAAGAGTTATTGGCTGAAGCCTCTGTTGAATATGGCTACACTGATCCAAAGGAAGT
TGCCGAGTCCACAAGTTTAGGTGTGACCGAGACTTCTTCTGCAATCCAGGCTCAGGAGTC
TTCTCCACGGTCTGCATTGCCAACATCGCCACATTTTGCTGATTCTAGATTCCTTGAGGA
ACCTGTTGCTTTTGAAGTATACTCTCCAGACCGGCTGGCTGGAGAATTGATCTTCATGGA
CAGCACTTTGGTTTTCACAGCTGAGGATCTGTCACGTGCACCGGCGGAAGTTCTTGGAAG
GAGCAGCCATGGAACAACGTATAAAGCTGTTCTACAAAGCGGGCATGTCCTAACAGTGAA
ATGGCTGCGTGTCGGTCTTGTGAAGCATAAAAAGGAGTTCACAAAGGAGATAAAGAGGAT
TGGCACTATCAGGAATCCAAATATAATTTCATGGAGAGCCTTCTATTGGGGCCCTAAGGA
GCAAGAGAGATTAATTATTTCTGACTATGTCAATGGTGATAGCTTGGCACTTTACCTTTA
TGAGTCGACTCCAAGAAGATACTCCCGCCTATCGGTTCCTCAGCGTCTCAGAATCGCCAT
CGACCTAGCCCGCTGCCTCCAGTTCCTACACCAGGAGAAGGGCTTGCCGCACGGCAACTT
GAAGCCAACTAACATATTCTTGGCTGGTCCTGACCTCTCTCCAAAGCTGGTGGACTACGG
CCTGCACAGGTTCATGACTCCAAGCGGCACCGCCGAGCAGATACTGAATCTAGGAGCGCT
AGGGTACCGAGCCCCGGAGCTGGCGAACGCGGCCAAGCCCGCGCCCACGTTCAAGGCGGA
CGTGTATGCGTTCGGGGTGATCGTCATGGAGATGCTGACACGGAGGAGCGCTGGGGACAT
CATCTCGGGCCAGTCCGGCGCGGTCGACCTGACCGACTGGGTCCAGATGTGCAGCAGGGA
AGGGCGGGGCACTGACTGCTTCGACCGAGACATCGCCGGCCTGGAAGAGTCCCCGAGGGT
CATGGACGAGCTGCTGGCGGTCTCGCTTAGGTGCGTCCTCCCTGTAAATGAGAGGCCTAG
CATGAAGACGGTCTGCGATGACCTGTGCTCCATAACAGCGTGAGTGAGTTTCCCCCTCCC
CCAATGTACATGTAACCGATCAATTTTCCGCCCGTTGGTCCTGATTTTTTCTCTATCCCG
TGGGGGTTCCAGAGCCTTGTAGACAGGGCTTGTTTGATTTGTAACTGCTAGTGTAAAGAG
GATTCGATCCACCCATTGATTGATTGATATCAGCCATTGCCGTC