Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006885_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:218537902:218543707:-1 gene:Zm00001d006885 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 5
Sequence	ATGGGAGGGTGCCACGCGAAGCCGCTCACGCAGGACGCGGACGGCTCGCCGCCGCACGCG GCGCCGGCGACCCCGCCCCCGGGCAACGCTACCCCCGGCCCCGGGAAGAAGCACTGGGCG GTGTCCCCGTTCTTCGCGTTCTCCACGCCGAGCCCGAGCCCCGCGCACCACCTCTTCGGC GGCTCCGCGGCGTCGCCGCGCAAGTCCCCCGCCCCCCCGGGCTCGGCGCCCACCACCCCG GCCAGGCGGATCCTGAGGCTGCCCTTCCCGCCGCCGTCGCCCGCCAAGCACATCCGGGCG GCTCTCGCGAGGCGGCACGGCCCGCCGCGGCCGTCCATCCCCGAGGAGGGCGGCGGCGAA GGGGAGGGCGGCGGCGGTGCCAGGGGCCTCGACAAGGGGTTTGGGTTCAACAAGGGGTTC GCGGCCAAGTATGACTTGGGGGATGAGGTCGGACGGGGCCACTTTGGCTACACCTGCGCC GCCACGGTTAAGAAGGGCGCACGCAAGGGGGAGTCCGTCGCCGTCAAAGTCATCCCCAAA GCAAAGATGACTACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTTAAAATCTTGAAG GCTTTGTTGTGTGAAGGTGGAGAGCTACTTGACAGAATACTTTCCAGAGGTGGGAAGTAC TCTGAGGATGATGCAAAAGCTGTCCTGGTGCAAATATTAAATGTCGTCGCTTTTTGCCAC ATTCAAGGAGTGGTTCATCGAGATCTCAAACCAGAGAATTTTCTTTTCACATCAAAAGAT GAGAATTCCCATCTTAAGGCCATTGACTTTGGCTTATCAGACTTTGTAAAACCAGATGAG AGGCTGAATGACATTGTTGGAAGTGCTTATTATGTTGCTCCAGAAGTTCTGCATAGATGC TATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATCCTTCTTTGCGGC AGCCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCGGTTCTCAAAGCTGAC CCCAGCTACAATGAGGCACCATGGCCTTCGCTGACTCCAGAAGCAATGGATTTTGTTAAG CGATTGCTGTGCAAGGATCCACGTAGAAGGATGACTGCAGCTCAGGCTTTAAGTCATCCG TGGATCAGAAATTATAATGCCATTAGGCTGCCGTTGGACATTCTTATATTCCGACTTATC AAAGCTTATATTCGTTCCTCATCTTTACGGAAAGCCGCTTTGAGGGCTCTATCAAAGACC TTAACAGTTGACGAGCTTTTCTATCTGAAAGCACAGTTTTCTTTATTGGAACCAGACAGA AATGGATGCATCACTCTTGACAATATCAGAATGGCCTTAACGAGAGAAGCTACTGATGCA ATGAAGGAATCCCGAGTTCAAGACATTCTTGTTTCGTTGAGCGCCCTTCAGTACAGAAGA ATGGACTTCCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCATCAGCTTGAAGCATTGGAT AGATGGGAGCAACATGCGCGATCTGCTTATGAATATTTTGAGAAGGAAGGCAACCGAGCT ATTGTAATAGATGAATTAGCTTCTGAATTGGGCCTCAGTCCTTCAGTGCCACTGCATGTC GTTCTGCAAGATTGGATCAGGCATACGGATGGGAAATTAAGTTTTCTTGGATTTGTCAAG TTGTTGCATGGCATGTCCAGCAGGTCCCTGTCAAAGATGAGATAG

Peptide Sequence

PEP ID	Zm00001d006885_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:218537902:218543707:-1 gene:Zm00001d006885 transcript:Zm00001d006885_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 5
Sequence	MGGCHAKPLTQDADGSPPHAAPATPPPGNATPGPGKKHWAVSPFFAFSTPSPSPAHHLFG GSAASPRKSPAPPGSAPTTPARRILRLPFPPPSPAKHIRAALARRHGPPRPSIPEEGGGE GEGGGGARGLDKGFGFNKGFAAKYDLGDEVGRGHFGYTCAATVKKGARKGESVAVKVIPK AKMTTSIAIEDVRREVKILKALLCEGGELLDRILSRGGKYSEDDAKAVLVQILNVVAFCH IQGVVHRDLKPENFLFTSKDENSHLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRC YSTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSYNEAPWPSLTPEAMDFVK RLLCKDPRRRMTAAQALSHPWIRNYNAIRLPLDILIFRLIKAYIRSSSLRKAALRALSKT LTVDELFYLKAQFSLLEPDRNGCITLDNIRMALTREATDAMKESRVQDILVSLSALQYRR MDFQEFCAAAVSVHQLEALDRWEQHARSAYEYFEKEGNRAIVIDELASELGLSPSVPLHV VLQDWIRHTDGKLSFLGFVKLLHGMSSRSLSKMR

Transcript Sequence

Transcript ID	Zm00001d006885_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:218537902:218543707:-1 gene:Zm00001d006885 gene_biotype:protein_coding transcript_biotype:protein_coding description:CDPK-related kinase 5
Sequence	TCCCCGTTTCAATTCGCTTCACTCCCCGCAGTCGCCACTCGCCGCTCCCTCGACCCCAGA GCTCTCTCTCTCTCTCCCTCCCTCTTCCTAGCTCCCCCTTTCCGGCATGGCCTCCTGCTA GCTCCCGTCGGAACGCCTCCCAGATCCCAGACGCAGCGCGCTACCCCACGCGAGCGAAGG CCGGCGCGCGACATGGGAGGGTGCCACGCGAAGCCGCTCACGCAGGACGCGGACGGCTCG CCGCCGCACGCGGCGCCGGCGACCCCGCCCCCGGGCAACGCTACCCCCGGCCCCGGGAAG AAGCACTGGGCGGTGTCCCCGTTCTTCGCGTTCTCCACGCCGAGCCCGAGCCCCGCGCAC CACCTCTTCGGCGGCTCCGCGGCGTCGCCGCGCAAGTCCCCCGCCCCCCCGGGCTCGGCG CCCACCACCCCGGCCAGGCGGATCCTGAGGCTGCCCTTCCCGCCGCCGTCGCCCGCCAAG CACATCCGGGCGGCTCTCGCGAGGCGGCACGGCCCGCCGCGGCCGTCCATCCCCGAGGAG GGCGGCGGCGAAGGGGAGGGCGGCGGCGGTGCCAGGGGCCTCGACAAGGGGTTTGGGTTC AACAAGGGGTTCGCGGCCAAGTATGACTTGGGGGATGAGGTCGGACGGGGCCACTTTGGC TACACCTGCGCCGCCACGGTTAAGAAGGGCGCACGCAAGGGGGAGTCCGTCGCCGTCAAA GTCATCCCCAAAGCAAAGATGACTACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTT AAAATCTTGAAGGCTTTGTTGTGTGAAGGTGGAGAGCTACTTGACAGAATACTTTCCAGA GGTGGGAAGTACTCTGAGGATGATGCAAAAGCTGTCCTGGTGCAAATATTAAATGTCGTC GCTTTTTGCCACATTCAAGGAGTGGTTCATCGAGATCTCAAACCAGAGAATTTTCTTTTC ACATCAAAAGATGAGAATTCCCATCTTAAGGCCATTGACTTTGGCTTATCAGACTTTGTA AAACCAGATGAGAGGCTGAATGACATTGTTGGAAGTGCTTATTATGTTGCTCCAGAAGTT CTGCATAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATC CTTCTTTGCGGCAGCCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCGGTT CTCAAAGCTGACCCCAGCTACAATGAGGCACCATGGCCTTCGCTGACTCCAGAAGCAATG GATTTTGTTAAGCGATTGCTGTGCAAGGATCCACGTAGAAGGATGACTGCAGCTCAGGCT TTAAGTCATCCGTGGATCAGAAATTATAATGCCATTAGGCTGCCGTTGGACATTCTTATA TTCCGACTTATCAAAGCTTATATTCGTTCCTCATCTTTACGGAAAGCCGCTTTGAGGGCT CTATCAAAGACCTTAACAGTTGACGAGCTTTTCTATCTGAAAGCACAGTTTTCTTTATTG GAACCAGACAGAAATGGATGCATCACTCTTGACAATATCAGAATGGCCTTAACGAGAGAA GCTACTGATGCAATGAAGGAATCCCGAGTTCAAGACATTCTTGTTTCGTTGAGCGCCCTT CAGTACAGAAGAATGGACTTCCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCATCAGCTT GAAGCATTGGATAGATGGGAGCAACATGCGCGATCTGCTTATGAATATTTTGAGAAGGAA GGCAACCGAGCTATTGTAATAGATGAATTAGCTTCTGAATTGGGCCTCAGTCCTTCAGTG CCACTGCATGTCGTTCTGCAAGATTGGATCAGGCATACGGATGGGAAATTAAGTTTTCTT GGATTTGTCAAGTTGTTGCATGGCATGTCCAGCAGGTCCCTGTCAAAGATGAGATAGCTG TCGATAATCTCTAACGACAGCGCGTGTTTACACCGTCCTGTTGACTTGAATCGTACGATT GGAGCTTGCATATCAAGGGCGTCTGAGCTCTAACAGCACCTGATCCGACACTAATTTAAC TATAGAGTTATGTTTATTGTTGCCTGCCTACTGATCATTTAGCCGATAGGGAAATGAAAG AAAATCTCACCCATGTCTGCAACATGTGATGTTTCTAACAACCTTAGATTAGGCGTCATC TTCTGTTATGATTCTAGAAATTTTGTAATGCTTCTTTTCTCGAACTGGAGCAAGTTAGCT GCAGTCACCAGGTTGGCGACTGGAGCATGGACATATCACTGTCATTGTGACATTGTTACT GT