Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006881_T013
CDS Infomation

cds chromosome:B73_RefGen_v4:2:218468165:218475863:1 gene:Zm00001d006881 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCTACTCCGCAGCCGCACGACATCGACGCGCTGGAGCAGATGGTCGACCCCGCGCT
GCGAGGGCTGTACCCGTCCAAATCCCTCTCCGGCCCACCCGCTTCGCCGATGCCATCGCT
CTATGCGTTCAGCCCGAGCCGGAGTTTCGGCCGCCGATGTGGGAGGTCTTGCAGTCGCTG
GTGCGCCAGCGCCTGGTGCAAAGGGCGAACATGGCGAGGACGCAGTCGCACTCGCGGCGC
CACGGCGAACCCGTTACTGCTTCAAGAGATGTTCTCGTGGTATGCTCATCTACTGGATGG
ACAGATGAAAAGCACATGCTTTATCTTCGATTATTGGAAGAAACATTTGTGCACCAATTA
CATGGAAGTGGTTGCATTTTTAAGGGACTGTTTAATTGCTCTCCAAGATATTGTAGGCAA
ATGAAATCATCTAAGCAAATTGTTAAATACACTACGCCTGGTCAGGGGTGTGCCATAGTT
GAGGGTGGCAAAGTCAAGTCCTGCATAAAGGCTGAGCATGTTGAGTCACCTTCCTGTTGT
GGAAATCAGCAAGATGAAAAAGTTCGTTCCCTGGAAGATAATGCATCAACCACTAAGCCC
ATGGAAAAAGCCACTTCCCATGCAAGGGCAGCAAGCCCAGGACAAGCTTCCACGTGCTAT
GTTGGCAAACACAGACATTCTCCTTCCAGAAGTGCAGAGGGGTCGGATCAGAACTTTGAT
GAGGAAACCCAAGGGACTGGAGAATCAAAACATGAATACAACCCGAAGCGACTGAAATCT
GCTGATGGCACAAGGGATCATCAGGTTGTGAATGCAGAAGCTCATCAGGTGGGCTGCCTT
GATGTGAGTGACAAAAATAGCGAGAACTTCAGTGCATCGTCAAAAGTGCTTGCTGCATCA
CTTGATGTTGAAGCTGGGTCTCCCTCCGGCGACTGCAAGGATCATGGACCAAAAGGATAA

Peptide Sequence

PEP ID

Zm00001d006881_P013
PEP Infomation

pep chromosome:B73_RefGen_v4:2:218468165:218475863:1 gene:Zm00001d006881 transcript:Zm00001d006881_T013 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGYSAAARHRRAGADGRPRAARAVPVQIPLRPTRFADAIALCVQPEPEFRPPMWEVLQSL
VRQRLVQRANMARTQSHSRRHGEPVTASRDVLVVCSSTGWTDEKHMLYLRLLEETFVHQL
HGSGCIFKGLFNCSPRYCRQMKSSKQIVKYTTPGQGCAIVEGGKVKSCIKAEHVESPSCC
GNQQDEKVRSLEDNASTTKPMEKATSHARAASPGQASTCYVGKHRHSPSRSAEGSDQNFD
EETQGTGESKHEYNPKRLKSADGTRDHQVVNAEAHQVGCLDVSDKNSENFSASSKVLAAS
LDVEAGSPSGDCKDHGPKG

Transcript Sequence

Transcript ID

Zm00001d006881_T013
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:218468165:218475863:1 gene:Zm00001d006881 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTGGTGCCTACTGACGACATGTGGAAAACTACAAATCTGCAAGGTTATTACAGGTATCTC
AACTCCATGTTCCGTGCCACTCTCATTCCTAAGGGAGGAAATCAAGTGAATGTGCATGGT
GAAAGTCACGTTCTCCTTTACTTCATGAAGCCAAATAAGAATTTTAGAATTAATGTGTTT
GACATGATCTGGAAAGAAATTATCCATGCCTCTTGGAACACATCTAAAGGGTGTGTGCAT
GCTCCTTTCATAATGAAAATGATTGAAGTGGTGTCTCAAACTTATTTTCAAAAGGACAGC
AAGCATGTCAAGTACACACCTTATTGGATTGATCCAAACAACCCAGCCGGCAGATCAAAA
AGGGCACCCACCTCAGCTGAGCCTGGAGCTTCTTCTTCATCCTCCGAAGAACCTGCTCCA
GCTCCACCTCTTCATCCCTCTTCTTCTCGGGCTGCCGCTGCCTCTCGCCCCATGAGCCGT
GGTGACCGAGGTAAGCAAGGAGGTCTTAAAGCTTTACTCAAGAAGGGGTTCAATGCCATG
TTTGCCATATATCGAGAGAACTCAATTCACACAGCTGAGCTTGTACGAAGAACAATGGAG
TTGGATCAGAATTTTAGACGTCATGTCGCTGGTCAACCGTTGCTTCCAGTTCGTCCGTAT
AATCCTCCACCTCCTATGGCCGACACTCTTGATCAGTGGCATCAACAAACTTATGGAGTT
CCCTTCAGTGCGTCCGACCAAGAAATCTCTGAGGATGAACCAGTTACTCCTCCTGCTGCT
TCTGCTTCAGTTCCTCCTACTCCTGCTGCTTCTGCTTCAGTTCCTCCTCCTCCTGCTTCC
GCTCCAGACTTGGGCACCTACTTCTTTGGTGATCCTAGTGGTGGTCATGGTCCCTATGGT
GGGTGGTGATCTTATTTTTTTCTTCATTTTGGTTGCTTGATGCCAAAAATGGGGAGAAGT
TTGTGATATCTTTGCTCTTTTATCTATCTACCCACTCTTGTTGTGAGTTGTGAGAGAGAA
CTTCAACTCTTGGGATGTAAAATAACTTTGTGATTGTGTGCTGATCTCAAAAACATCTAG
CTTGTAATAGTAAATTAGGTGAACTTATTTCATTATGATGAATTTCTGTTATCCTAAGTT
TTGTGTCATTTACTTCTCTTTTGTTTGTGGTGTATTGTTGTTATTATTATTTTTGGGTGT
ATGTCTTGTCATATGCATTTGTTTTATAGACATTTTATATGACATCTTGTTCCACCTCTC
AGATACATGTGCATTATGTGACCTCTACACTTTCTCTCTAAATGTGATGCATGAATGGCA
TATGAGGCCAATTCTTGTGAAATTCATCACATGCACACATTTAGGGAGAGTCATAAGTAT
TAAAAAATCTTGTGTTTATCTTATCTACGTCACTTTTAATTATTTTATCATTAATCACCA
AAAAGAGAGAGATTATAAGAGCAATTAATCTTTTGAGGGTTTTAGTGATTGAATGTCAAA
GAGATTAAAAGTACTAACAACTTTATTTGAGCATGTGTATAGTTCTTAATATCCTGTGAA
GTGCTCATGCTCATGCCAAAGAGTCAAAAGAGCATGAAACGTCTATGTGAAGTTATGCAG
GACCCAAAGAAGATATATCATGAAGAGCGAATCACATCCAAAAATCTTTTGAGACATATT
CAAGATTAAACTCAATACTCAAGAATCGAGATCTTGGTTGACTTTTATTTATGTCATTGA
ATATAGGAATCGTCATACTATCAAGAGGGATCAACATATGGTATTGGCGTTGTTGCTAAA
GCTCACACTCTTTATTTTTGAGTGAACTATTTTATTTCAGCTCCACTGTGATTGAAGTGG
GCTGTTCAACCAGTCCTTGGCCCACCTCAACCTTGTTTCTCTTTGGTCTCCAGACAAGTG
GAAACTTGTTTAACAATGACCCCGCTCCACCACCTCCACCATCACCACTAGCACCAAATA
CCCCTCCCTATTGGCAACCTGATGTTCCAGCTTACCCATCCCCATACTTATATTTAAACT
CTACTCGCGAACGGTGCAGTCTACGATGCAGAACAATGTAAAATAGTACATATGGGTAAA
CTTTGGGTAATCTGCTGGAGTCGGCCTAAAGTCTAAGATACCCAGCCGAAAATGGTGGCA
GACACTCCAAACTTGGTGATGGTGCAGTTGCAGGAATCGTAATATGTTTGCTGGATGTTG
GTGCAATAGTTGCATTCCTTGTAATCAAAAGGAAATCTTGGAGGTTATCATGGGGACAAG
ACCCGGAACAAAATGAACCTCTCAGTCCTCTTGCTTCTGGACTTAAACAGATGAAATCTA
TCAAAATCATATCGACAATTGGCAAAGAAGAACTGCAGAAGACTGTTTAGATGAGTTTGA
AGCCGCCAACAAAAATTGACCTCCACAAGTCCTTTGATGAAAGTGATACCACTAACAAGT
CCATCTCAAGGTAAAGTAAGTTTGTCTTCCATAACAATACCTGCATAGACGGTGGCAGGC
CTTCAGGTGCAACAGGCAGCTTCGGTCCTGACAGTCTTATCTGTGAGGGGTCGTTAGGCC
CCGCGTTTACAAAGCGAAATTCGGTGATCAGAAGATTCACGAATTTCAAATTATGATCAA
AACTATTGCGATATCATCACTTTCTGGATGGTAAATTTCAGGTCCCGACCGCGGGCCGAG
CAGTCACTTGTCCGATGGGCTACTCCGCAGCCGCACGACATCGACGCGCTGGAGCAGATG
GTCGACCCCGCGCTGCGAGGGCTGTACCCGTCCAAATCCCTCTCCGGCCCACCCGCTTCG
CCGATGCCATCGCTCTATGCGTTCAGCCCGAGCCGGAGTTTCGGCCGCCGATGTGGGAGG
TCTTGCAGTCGCTGGTGCGCCAGCGCCTGGTGCAAAGGGCGAACATGGCGAGGACGCAGT
CGCACTCGCGGCGCCACGGCGAACCCGTTACTGCTTCAAGAGATGTTCTCGTGGTATGCT
CATCTACTGGATGGACAGATGAAAAGCACATGCTTTATCTTCGATTATTGGAAGAAACAT
TTGTGCACCAATTACATGGAAGTGGTTGCATTTTTAAGGGACTGTTTAATTGCTCTCCAA
GATATTGTAGGCAAATGAAATCATCTAAGCAAATTGTTAAATACACTACGCCTGGTCAGG
GGTGTGCCATAGTTGAGGGTGGCAAAGTCAAGTCCTGCATAAAGGCTGAGCATGTTGAGT
CACCTTCCTGTTGTGGAAATCAGCAAGATGAAAAAGTTCGTTCCCTGGAAGATAATGCAT
CAACCACTAAGCCCATGGAAAAAGCCACTTCCCATGCAAGGGCAGCAAGCCCAGGACAAG
CTTCCACGTGCTATGTTGGCAAACACAGACATTCTCCTTCCAGAAGTGCAGAGGGGTCGG
ATCAGAACTTTGATGAGGAAACCCAAGGGACTGGAGAATCAAAACATGAATACAACCCGA
AGCGACTGAAATCTGCTGATGGCACAAGGGATCATCAGGTTGTGAATGCAGAAGCTCATC
AGGTGGGCTGCCTTGATGTGAGTGACAAAAATAGCGAGAACTTCAGTGCATCGTCAAAAG
TGCTTGCTGCATCACTTGATGTTGAAGCTGGGTCTCCCTCCGGCGACTGCAAGGATCATG
GACCAAAAGGATAATGCAATGTCCACCGAGTGTTTTCTGGAGTTGACTAACACACCCACC
TGGCGCGCCGCAACTGAATCAGAGATAGGAAGTCAATCAGTGCAAGTTTGTAAGATAAGC
TAGCTTGCCCGTTATTCTGGTTTGGAAGTCAAAATAGTTCGTTCAACTTAGCCTAGGCAG
TTGACGGTTTTGTTGTGTTTCTGAGGGACTCTGATACGAAAATCAAATTCCCTTTGTTCT
GTGTTTGGCGCTGCAACCTGTAAATGGAGTGCTTTTTTTTTGCGTACCGTGATATCTGCG
TTTTGGAATACTATAATATCAGAATTTGGAGCGTGTTTCGCCATGCTCGCC