Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006864_T050
CDS Infomation	cds chromosome:B73_RefGen_v4:2:218092095:218097514:1 gene:Zm00001d006864 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATGTTCAGCGAAGCATGCACGAAATTCATGTCACTTTGCCAGCGGCGTCATGACATCAGT CCTCAAACCGCACAGCCAGCAGTTTCATCACACTGGAAGGTCTTTGATGATGGGAATGTT CGTGGTTCTTCCAGTTCAGACATGTCTATAGATGAGCCACAAGTTGATCTCGGTGAATCC AACAACAAATCTACAGTCGGTGGAAGTGGCTCTCAGGTCCACAGACTAAGCAACAGCCAA GGCTTAGAAGTCGCTGCAGAACAGCAACCCAAGCCAACCATCCCACAGGCCATAGATAAA CAAGAAGCAGAAACAGACGCGTCTCCCGCACCTGCTGCAGGAGGGCTTTCAAGGCGTCTG AGTGTGAAGGACAGGATAAACATGTTTGAGAGCCAGAAAAAGGAGCAGACTCCAAGTTCT GGTAACAGCAACTCAGCAGGTACTGGTAGGGTGGTTCCAGGGAGAGGTGAGCACCGCAGG GTTCCTTCTGGGGCCTCCATGGAGAAGTTAGTTAGAAGGTGGAGCAGTGTTAGCGACATG AGTATTGATCTCAGCAACAATGAGAGCGTTAACATAAATGACAAAAAGGACAATGGAACT CCTGTTGTGACTCCAACATCTACTGATTTGGAGGCCAACTCTAAAGCAAAAGCTGATGTG GACTCTAATGGACAGAAGGATTTAGTCACATCACACTCCTGGCCTTATCAAAAGGATAAT GTACCAATGGATCCGACTACCACAGATTTGTGCCCACCCTCAACTTTAAGTAATACACTT GCTCCTCATAGTGATGGTGCAGGAAACGACATGGTTATAAACTCTAGCATTGAGAGTGAG TCATCCTTTGGGAAAGAAGCGGGGGTTATTCAAGGACTCACAAGGATGTCAAATCATGCT ACTTCAAATGTTTCCACTCGAAACCATCTAAAATCTTCTGCAAAGCCAGTTGAGGAAGGC TTGCTGAAAAATAAGGATATTTTAACCAGCACATCGTTAGAGGAGCATGTTCGCATGATA GATAAGGAAATAACAGCTGTTCCTCATGAAGTATTAGTTGCAAGTGAACAGATTCCCCAG AATGATATTAGAGGTCTCCATACAAAAGATATTCACACTGAATCTGAAGTGACTGGAAGG AAGGATCAGCCTTCACGATCATTTGGAAAGGTATCTGGTGGTGTTAATCCTAAACCAAAA ACATCATCCAATTCCCGAGCTAATGTTAAAGGCTCATCTGGTAGGGATGAGATTACCTTT ACAGAAACTGAGTTCCGTGATGTTAGTTTGCAGCGGAATCGTCTACCACGGAAGGCAGAG GATGTAGGGAGAAAGGTTACAGGTGGTTCTGATTCAGATTCTTCTGGTCGCCAGGGAACA AATTTGAGCAGGCAATCATCCATTACCATCCAGGAACTAAACTTCCAGGCTAGAGTGATG GGACCAGGAAAAGGGAACCAAGATCGGCATGGCGAATTGCAAATGAAGGCTAATGAGTTG GAGAAATTATTTGCTGAACACAAGTTAATATCATCCCGACGAGGCAAACCTACAGATGTG CAGGTTGATAGCACACGTACGGTGAGTGAGGTAAAGCCGATAACAGTTCTTCATGAGACA ATTCATACAAAACAAGTTGTAAAGGAGAGTATAACAACCAATGATTTTGATGCCAGTGAG CTTCTGAAGATGGTGAGTAATCAAGGATTTAACATTAGCACACCACAAAAACTTGGCATT CTAAGCTTAGAAGAGTCGAGAGGGAAGTTTTATGAGCATTATATGCAGAAGAGGGATGCA AAACTGAAGGAAGACTGGAAACTGCAGAGGGGGGAGAAGGAAGCAATGTTAAAGGCTATG CATGAGAGCCTAGAACGGAGCAAGGCTGAGATGCGAGCTAAATTCTCTCAGTCTGGAGAT GTTTCTGACTCAACTTATGTTTATCATTGTTCTCAGAAGATTCCTCCTTCGCGATCAGCA AGAAGAAATAATGATCAGGGGGTTGACTCATTCTTGGTTGAAGAGGAATTGAATAGTGAC TACCTATCTGGTGACGGTTCTTCCAGGAGTGCTGATTCTAGGAAGCATTTTCCAAATAAA GTTGCTTCCACCCAAAAGGCATCTGTTGGTCCTATCCATAAGCGTTCTTCAAGGACTGCA AGCTCCGGTTATGGCAATCGCAGGAATCTACCAGAAAATCCTATCGCACAGCCTGTCCCC AGTTTCTCTGACTTAAGAAAAGAAAATACAAAGCCTTCACCTGGACTCAGTAGAGCGGCT GCAAGAGTTCAGCAAAAGTCTTTTGCCCGTAGCAAGAGCATTATTGAAGAGTCAAAGAGT ATATTGAAAGAAGATCAATCGAGGAGGTCACAATCTATGAGGAAGAGCCAAATTCCGGAT GAGTTGAAGGACATTTCATCAGGGAATGAGGATATTTACAATTGGGCTCCATCAAGAATT TCCAAGAATCAATCAGAGGGAGCTTTTGCTTACAGTGCCCGTAGAACGGGTCCACCAAAG CCATTTCTTAGGAAAGGCAATGGGACTCACCCCGTTATAGGTATAGCTGGATTTCAGGCT GCAGCGGCTATGATGGCGAATGCCCTCCAGAATGGTGACAGTGGTGATTTTGAAGATCAC CAAGATGATTCTCCTGATGATGCCAAAGAAGAAGAAGAATATGAAAGTATTGAAGAAAAT TTTAGAGAAAGTGACTTTCCTGCTGATTCTGACAGTGAGAACCCAAGAGTTAGTCATGAA TTTGGAAATTCAGATGACCCAGGGTCAGAAAATGGCGATGCTAACTTTTCAAGTGAAGCA CCCGCAATTGGTGGTACTAAGTTCACTGCTTTTACAGGAAACGTTCATGATCCAGCTAGT GATGTTCCAGCACCCTGGAGTTCTCGTCTTCCACAGCTGTCCCCTTACATGAATGATAAT ACAGATGGTGACACATTCGCTGATTCACCGTGTGGAAGTCCACCATGGAATTCTCATTCA CTTGATGAAATAACAGATGCTGATGTATCTCGGATGCGGAAAAAGTGGGGCAGTGCACAG ATGCCTTTTGCTGGTGTCAGTGCATCTCAACAGCCACGCAAAGATGTTTCCAAAGGATTG AAGAAACTGTGGAAATTTGGTAGGAAGACTAGAGGGGGTGATGGTTTAGTAAATGATTGG GTATCTGCTTCCACTGCCTCAGAATACGATGAAGACATGGAAGATGGGCGGGATCTGGTA GTAGGATCTTCTGATGATTTCAAAAAGTCTCGAATGGGTTATCTTGCTTCATATGATGAT TTTGTTGAGGATGAGGTTTTTGTTTGCAGAACAATCACTACGCAGCTCAATTCCAAACCC ACCTGCAAATTTCAGACCGAGAGAAGATCAACTGACTGGAAGAGGTATAGAAAGCGCCAC GTTCTTTCTTCTCCCTGTCAACATTCCGAAGCAAGGGAGGTGATGCCAGGCTCAGGTGAT CCTCAGAAAGTCAGAAGACACCAGAGGTGGAGTGTATAA

Peptide Sequence

PEP ID	Zm00001d006864_P050
PEP Infomation	pep chromosome:B73_RefGen_v4:2:218092095:218097514:1 gene:Zm00001d006864 transcript:Zm00001d006864_T050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MFSEACTKFMSLCQRRHDISPQTAQPAVSSHWKVFDDGNVRGSSSSDMSIDEPQVDLGES NNKSTVGGSGSQVHRLSNSQGLEVAAEQQPKPTIPQAIDKQEAETDASPAPAAGGLSRRL SVKDRINMFESQKKEQTPSSGNSNSAGTGRVVPGRGEHRRVPSGASMEKLVRRWSSVSDM SIDLSNNESVNINDKKDNGTPVVTPTSTDLEANSKAKADVDSNGQKDLVTSHSWPYQKDN VPMDPTTTDLCPPSTLSNTLAPHSDGAGNDMVINSSIESESSFGKEAGVIQGLTRMSNHA TSNVSTRNHLKSSAKPVEEGLLKNKDILTSTSLEEHVRMIDKEITAVPHEVLVASEQIPQ NDIRGLHTKDIHTESEVTGRKDQPSRSFGKVSGGVNPKPKTSSNSRANVKGSSGRDEITF TETEFRDVSLQRNRLPRKAEDVGRKVTGGSDSDSSGRQGTNLSRQSSITIQELNFQARVM GPGKGNQDRHGELQMKANELEKLFAEHKLISSRRGKPTDVQVDSTRTVSEVKPITVLHET IHTKQVVKESITTNDFDASELLKMVSNQGFNISTPQKLGILSLEESRGKFYEHYMQKRDA KLKEDWKLQRGEKEAMLKAMHESLERSKAEMRAKFSQSGDVSDSTYVYHCSQKIPPSRSA RRNNDQGVDSFLVEEELNSDYLSGDGSSRSADSRKHFPNKVASTQKASVGPIHKRSSRTA SSGYGNRRNLPENPIAQPVPSFSDLRKENTKPSPGLSRAAARVQQKSFARSKSIIEESKS ILKEDQSRRSQSMRKSQIPDELKDISSGNEDIYNWAPSRISKNQSEGAFAYSARRTGPPK PFLRKGNGTHPVIGIAGFQAAAAMMANALQNGDSGDFEDHQDDSPDDAKEEEEYESIEEN FRESDFPADSDSENPRVSHEFGNSDDPGSENGDANFSSEAPAIGGTKFTAFTGNVHDPAS DVPAPWSSRLPQLSPYMNDNTDGDTFADSPCGSPPWNSHSLDEITDADVSRMRKKWGSAQ MPFAGVSASQQPRKDVSKGLKKLWKFGRKTRGGDGLVNDWVSASTASEYDEDMEDGRDLV VGSSDDFKKSRMGYLASYDDFVEDEVFVCRTITTQLNSKPTCKFQTERRSTDWKRYRKRH VLSSPCQHSEAREVMPGSGDPQKVRRHQRWSV

Transcript Sequence

Transcript ID	Zm00001d006864_T050
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:218092095:218097514:1 gene:Zm00001d006864 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	ATCCATTGTTACACTGCTGGTTGCGATGGCAACTCTGAAGTTATTCATTGCCCACTTTGC TTTATTTTTTCCATTTACTGTCTTTCCTGTTGACTAATATTTGAACATGTATAACAACTT AAACTTGTGATGTTCAGCGAAGCATGCACGAAATTCATGTCACTTTGCCAGCGGCGTCAT GACATCAGTCCTCAAACCGCACAGCCAGCAGTTTCATCACACTGGAAGGTCTTTGATGAT GGGAATGTTCGTGGTTCTTCCAGTTCAGACATGTCTATAGATGAGCCACAAGTTGATCTC GGTGAATCCAACAACAAATCTACAGTCGGTGGAAGTGGCTCTCAGGTCCACAGACTAAGC AACAGCCAAGGCTTAGAAGTCGCTGCAGAACAGCAACCCAAGCCAACCATCCCACAGGCC ATAGATAAACAAGAAGCAGAAACAGACGCGTCTCCCGCACCTGCTGCAGGAGGGCTTTCA AGGCGTCTGAGTGTGAAGGACAGGATAAACATGTTTGAGAGCCAGAAAAAGGAGCAGACT CCAAGTTCTGGTAACAGCAACTCAGCAGGTACTGGTAGGGTGGTTCCAGGGAGAGGTGAG CACCGCAGGGTTCCTTCTGGGGCCTCCATGGAGAAGTTAGTTAGAAGGTGGAGCAGTGTT AGCGACATGAGTATTGATCTCAGCAACAATGAGAGCGTTAACATAAATGACAAAAAGGAC AATGGAACTCCTGTTGTGACTCCAACATCTACTGATTTGGAGGCCAACTCTAAAGCAAAA GCTGATGTGGACTCTAATGGACAGAAGGATTTAGTCACATCACACTCCTGGCCTTATCAA AAGGATAATGTACCAATGGATCCGACTACCACAGATTTGTGCCCACCCTCAACTTTAAGT AATACACTTGCTCCTCATAGTGATGGTGCAGGAAACGACATGGTTATAAACTCTAGCATT GAGAGTGAGTCATCCTTTGGGAAAGAAGCGGGGGTTATTCAAGGACTCACAAGGATGTCA AATCATGCTACTTCAAATGTTTCCACTCGAAACCATCTAAAATCTTCTGCAAAGCCAGTT GAGGAAGGCTTGCTGAAAAATAAGGATATTTTAACCAGCACATCGTTAGAGGAGCATGTT CGCATGATAGATAAGGAAATAACAGCTGTTCCTCATGAAGTATTAGTTGCAAGTGAACAG ATTCCCCAGAATGATATTAGAGGTCTCCATACAAAAGATATTCACACTGAATCTGAAGTG ACTGGAAGGAAGGATCAGCCTTCACGATCATTTGGAAAGGTATCTGGTGGTGTTAATCCT AAACCAAAAACATCATCCAATTCCCGAGCTAATGTTAAAGGCTCATCTGGTAGGGATGAG ATTACCTTTACAGAAACTGAGTTCCGTGATGTTAGTTTGCAGCGGAATCGTCTACCACGG AAGGCAGAGGATGTAGGGAGAAAGGTTACAGGTGGTTCTGATTCAGATTCTTCTGGTCGC CAGGGAACAAATTTGAGCAGGCAATCATCCATTACCATCCAGGAACTAAACTTCCAGGCT AGAGTGATGGGACCAGGAAAAGGGAACCAAGATCGGCATGGCGAATTGCAAATGAAGGCT AATGAGTTGGAGAAATTATTTGCTGAACACAAGTTAATATCATCCCGACGAGGCAAACCT ACAGATGTGCAGGTTGATAGCACACGTACGGTGAGTGAGGTAAAGCCGATAACAGTTCTT CATGAGACAATTCATACAAAACAAGTTGTAAAGGAGAGTATAACAACCAATGATTTTGAT GCCAGTGAGCTTCTGAAGATGGTGAGTAATCAAGGATTTAACATTAGCACACCACAAAAA CTTGGCATTCTAAGCTTAGAAGAGTCGAGAGGGAAGTTTTATGAGCATTATATGCAGAAG AGGGATGCAAAACTGAAGGAAGACTGGAAACTGCAGAGGGGGGAGAAGGAAGCAATGTTA AAGGCTATGCATGAGAGCCTAGAACGGAGCAAGGCTGAGATGCGAGCTAAATTCTCTCAG TCTGGAGATGTTTCTGACTCAACTTATGTTTATCATTGTTCTCAGAAGATTCCTCCTTCG CGATCAGCAAGAAGAAATAATGATCAGGGGGTTGACTCATTCTTGGTTGAAGAGGAATTG AATAGTGACTACCTATCTGGTGACGGTTCTTCCAGGAGTGCTGATTCTAGGAAGCATTTT CCAAATAAAGTTGCTTCCACCCAAAAGGCATCTGTTGGTCCTATCCATAAGCGTTCTTCA AGGACTGCAAGCTCCGGTTATGGCAATCGCAGGAATCTACCAGAAAATCCTATCGCACAG CCTGTCCCCAGTTTCTCTGACTTAAGAAAAGAAAATACAAAGCCTTCACCTGGACTCAGT AGAGCGGCTGCAAGAGTTCAGCAAAAGTCTTTTGCCCGTAGCAAGAGCATTATTGAAGAG TCAAAGAGTATATTGAAAGAAGATCAATCGAGGAGGTCACAATCTATGAGGAAGAGCCAA ATTCCGGATGAGTTGAAGGACATTTCATCAGGGAATGAGGATATTTACAATTGGGCTCCA TCAAGAATTTCCAAGAATCAATCAGAGGGAGCTTTTGCTTACAGTGCCCGTAGAACGGGT CCACCAAAGCCATTTCTTAGGAAAGGCAATGGGACTCACCCCGTTATAGGTATAGCTGGA TTTCAGGCTGCAGCGGCTATGATGGCGAATGCCCTCCAGAATGGTGACAGTGGTGATTTT GAAGATCACCAAGATGATTCTCCTGATGATGCCAAAGAAGAAGAAGAATATGAAAGTATT GAAGAAAATTTTAGAGAAAGTGACTTTCCTGCTGATTCTGACAGTGAGAACCCAAGAGTT AGTCATGAATTTGGAAATTCAGATGACCCAGGGTCAGAAAATGGCGATGCTAACTTTTCA AGTGAAGCACCCGCAATTGGTGGTACTAAGTTCACTGCTTTTACAGGAAACGTTCATGAT CCAGCTAGTGATGTTCCAGCACCCTGGAGTTCTCGTCTTCCACAGCTGTCCCCTTACATG AATGATAATACAGATGGTGACACATTCGCTGATTCACCGTGTGGAAGTCCACCATGGAAT TCTCATTCACTTGATGAAATAACAGATGCTGATGTATCTCGGATGCGGAAAAAGTGGGGC AGTGCACAGATGCCTTTTGCTGGTGTCAGTGCATCTCAACAGCCACGCAAAGATGTTTCC AAAGGATTGAAGAAACTGTGGAAATTTGGTAGGAAGACTAGAGGGGGTGATGGTTTAGTA AATGATTGGGTATCTGCTTCCACTGCCTCAGAATACGATGAAGACATGGAAGATGGGCGG GATCTGGTAGTAGGATCTTCTGATGATTTCAAAAAGTCTCGAATGGGTTATCTTGCTTCA TATGATGATTTTGTTGAGGATGAGGTTTTTGTTTGCAGAACAATCACTACGCAGCTCAAT TCCAAACCCACCTGCAAATTTCAGACCGAGAGAAGATCAACTGACTGGAAGAGGTATAGA AAGCGCCACGTTCTTTCTTCTCCCTGTCAACATTCCGAAGCAAGGGAGGTGATGCCAGGC TCAGGTGATCCTCAGAAAGTCAGAAGACACCAGAGGTGGAGTGTATAAAATATCTTCCGA GGTTAGGTATGAGTATCAAATTTTCAGGGCGGTACGCGGCTAGCTTGTGATTATAAATAT ATATCTATATGTTGTGTATCTATGGCAATTCATATAAGCTACCAGTTGAGCCCCCCATTG TTACTGTTTGATTATTCTTTTTCCGTAATATTCTTTGACCTCTGCAGTCTGTTCTTCCAA CTGGCCCAAAACTACTGTATTTTTCGTTGTTTTTGTGATATATATGTATC