Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006845_T023
CDS Infomation

cds chromosome:B73_RefGen_v4:2:217771634:217777736:1 gene:Zm00001d006845 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exportin-T
Sequence

ATGGCAGAGCAACGGAAAGATTTGATCGTATTATTCCGGAGCATTTGTCGTGTTGCACCA
GCTGCAGCTCAGCTATTCATAAGTGGGCTGATTGTGACAGCTCTCTCATCTGCAGAAGCT
AGTGTGGAGGATGTTGAGGTTGCTCTTACCCTGTTCTTCCGGCTTGGAGAAGCTGTGGGT
GAGGAGGAGATTCGGACTGGGGCAGGGCTGATAGGCCAGCTTGTGCCCATGCTCCTAACT
GCGAGGTTCTCGTGTCACACACACCGCTTAGTTGCATTGGTGTACCTGGAGACAGTAACC
CGCTACATGAAGTTCATGCAGGAGCATGTGCAGTATGTACCACACCTGCTTGGCGTGTTC
TTGGATAACCGTGGAATACACCATCAGAATGCCCACGTGAGCCGTCGTGCAGGATACTTA
TTCATGAGGGCAGTCAAGTCATTGAAGGCAAAGCTAGTGCCTTACCTGGATACCATACTG
CAGAGCCTGCAAGATGTACTAAGTCAATTCACTTCTATGAATTGGCCAAACAAGGATACT
AAGTTTCCCAGCTCAGAGGACGGCAGCCAAATTTTTGAGGCTGTTGGATTACTGATAGGC
ATTGAAGAGGTATCACCAGAGAAGCAGGCTCAGTTCTTGACCGCTCTTCTAAATCCTCTC
TGTCATCAGGTTGAGTCACTTGTTATGGATGCCAAAGCACGAGGGCTTGAGGAATCATCA
CCAATGGCTATTAGCCTTCAACAAATTATTGTTGCATTGAATATGGTCAGCAAGGGCTTC
AATGAGCGTCTTGTGATGGTAAATAGGCCAGCTATTGGGATCATGTTTAAGAAAACCCTT
GATGTAGTTTTGCAAGTCCTTGTTTCATTTCCTAGCGTGAGACCTCTGCGATCTAAGGTC
ATATCGTTTCTGCATCGTATGATCGAGATATTAGGTCTCTCAGTGCTTCCCTGTATTCCA
ATTGCACTGAGACTATTGCTTCTTGACAACGAGGCTAAAGATATGGTGGAATTTCTCGTA
TTGGTAAACCAAATAATCTGCAAATTTAAATCGTCAGCTAGCGCCATATTGGAGGAAATA
TTTCCTACTATTGCAAGTCGTTTGTCTGCGATATTATCACAAGATGCATTTTCAGCTGGT
CCTGCAAGCAATACTGAGGAAATGCGAGAACTGCAAGAGCTGCAGAGGACATTATACACA
TTCTTGCATGCTATGGCAACACATGATCTTTCTGCAGTTCTCCTTACTCCTAGCTCTAGG
GAGTATCTGGAGACCATAATGCAGTTGCTTTTATTTACCTCATACAAACATAGAGATATA
CTACTGCGCAAGGCATGTGTACAAATTTTTGTGAATCTTGTAAAAGACTGGTGCTCTAAC
TCTGAAGATAAGGTTCCAGGCTTCCGAGTATTTATGATTGAGAAGTTTGCTACTAATTGC
TGTTTATACAGCGTCCTTGATAAATCATTTGATTTACGCGATGCAAACTCGCTTGTCCTT
TTTGGTGAAATTGTGCTGGCCCAGAAGATTATGTATGAAAGATTTGGGGGGGATTTCATT
GTGAACTTTATAGCAAAAGGTCTTTCTGGAGTTCACTGCCCACCGGACCTAGCTGAACAG
TACTACCAGAAGTTAAAGGGAAATGATATCAAGGCATTCAGGTCATTTTATCAATCGCTT
GTTGAGAGAATAAGACCGCAGGGGAATGGGAGTCTTGTTTTCAGATAG

Peptide Sequence

PEP ID

Zm00001d006845_P023
PEP Infomation

pep chromosome:B73_RefGen_v4:2:217771634:217777736:1 gene:Zm00001d006845 transcript:Zm00001d006845_T023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exportin-T
Sequence

MAEQRKDLIVLFRSICRVAPAAAQLFISGLIVTALSSAEASVEDVEVALTLFFRLGEAVG
EEEIRTGAGLIGQLVPMLLTARFSCHTHRLVALVYLETVTRYMKFMQEHVQYVPHLLGVF
LDNRGIHHQNAHVSRRAGYLFMRAVKSLKAKLVPYLDTILQSLQDVLSQFTSMNWPNKDT
KFPSSEDGSQIFEAVGLLIGIEEVSPEKQAQFLTALLNPLCHQVESLVMDAKARGLEESS
PMAISLQQIIVALNMVSKGFNERLVMVNRPAIGIMFKKTLDVVLQVLVSFPSVRPLRSKV
ISFLHRMIEILGLSVLPCIPIALRLLLLDNEAKDMVEFLVLVNQIICKFKSSASAILEEI
FPTIASRLSAILSQDAFSAGPASNTEEMRELQELQRTLYTFLHAMATHDLSAVLLTPSSR
EYLETIMQLLLFTSYKHRDILLRKACVQIFVNLVKDWCSNSEDKVPGFRVFMIEKFATNC
CLYSVLDKSFDLRDANSLVLFGEIVLAQKIMYERFGGDFIVNFIAKGLSGVHCPPDLAEQ
YYQKLKGNDIKAFRSFYQSLVERIRPQGNGSLVFR

Transcript Sequence

Transcript ID

Zm00001d006845_T023
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:217771634:217777736:1 gene:Zm00001d006845 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exportin-T
Sequence

GTCATTTGATCCAGTATATAGGGGGCATCTTGATGTGCTTGACAAGATAGGGAAGGAGGA
GGAGGACCTCATGGCAGAGCAACGGAAAGATTTGATCGTATTATTCCGGAGCATTTGTCG
TGTTGCACCAGCTGCAGCTCAGCTATTCATAAGTGGGCTGATTGTGACAGCTCTCTCATC
TGCAGAAGCTAGTGTGGAGGATGTTGAGGTTGCTCTTACCCTGTTCTTCCGGCTTGGAGA
AGCTGTGGGTGAGGAGGAGATTCGGACTGGGGCAGGGCTGATAGGCCAGCTTGTGCCCAT
GCTCCTAACTGCGAGGTTCTCGTGTCACACACACCGCTTAGTTGCATTGGTGTACCTGGA
GACAGTAACCCGCTACATGAAGTTCATGCAGGAGCATGTGCAGTATGTACCACACCTGCT
TGGCGTGTTCTTGGATAACCGTGGAATACACCATCAGAATGCCCACGTGAGCCGTCGTGC
AGGATACTTATTCATGAGGGCAGTCAAGTCATTGAAGGCAAAGCTAGTGCCTTACCTGGA
TACCATACTGCAGAGCCTGCAAGATGTACTAAGTCAATTCACTTCTATGAATTGGCCAAA
CAAGGATACTAAGTTTCCCAGCTCAGAGGACGGCAGCCAAATTTTTGAGGCTGTTGGATT
ACTGATAGGCATTGAAGAGGTATCACCAGAGAAGCAGGCTCAGTTCTTGACCGCTCTTCT
AAATCCTCTCTGTCATCAGGTTGAGTCACTTGTTATGGATGCCAAAGCACGAGGGCTTGA
GGAATCATCACCAATGGCTATTAGCCTTCAACAAATTATTGTTGCATTGAATATGGTCAG
CAAGGGCTTCAATGAGCGTCTTGTGATGGTAAATAGGCCAGCTATTGGGATCATGTTTAA
GAAAACCCTTGATGTAGTTTTGCAAGTCCTTGTTTCATTTCCTAGCGTGAGACCTCTGCG
ATCTAAGGTCATATCGTTTCTGCATCGTATGATCGAGATATTAGGTCTCTCAGTGCTTCC
CTGTATTCCAATTGCACTGAGACTATTGCTTCTTGACAACGAGGCTAAAGATATGGTGGA
ATTTCTCGTATTGGTAAACCAAATAATCTGCAAATTTAAATCGTCAGCTAGCGCCATATT
GGAGGAAATATTTCCTACTATTGCAAGTCGTTTGTCTGCGATATTATCACAAGATGCATT
TTCAGCTGGTCCTGCAAGCAATACTGAGGAAATGCGAGAACTGCAAGAGCTGCAGAGGAC
ATTATACACATTCTTGCATGCTATGGCAACACATGATCTTTCTGCAGTTCTCCTTACTCC
TAGCTCTAGGGAGTATCTGGAGACCATAATGCAGTTGCTTTTATTTACCTCATACAAACA
TAGAGATATACTACTGCGCAAGGCATGTGTACAAATTTTTGTGAATCTTGTAAAAGACTG
GTGCTCTAACTCTGAAGATAAGGTTCCAGGCTTCCGAGTATTTATGATTGAGAAGTTTGC
TACTAATTGCTGTTTATACAGCGTCCTTGATAAATCATTTGATTTACGCGATGCAAACTC
GCTTGTCCTTTTTGGTGAAATTGTGCTGGCCCAGAAGATTATGTATGAAAGATTTGGGGG
GGATTTCATTGTGAACTTTATAGCAAAAGGTCTTTCTGGAGTTCACTGCCCACCGGACCT
AGCTGAACAGTACTACCAGAAGTTAAAGGGAAATGATATCAAGGCATTCAGGTCATTTTA
TCAATCGCTTGTTGAGAGAATAAGACCGCAGGGGAATGGGAGTCTTGTTTTCAGATAGCA
TCATCCTTTCATTTTCAATATGTTTTCCACCAAAAGATACCTCAACTGTGTTATTTAATT
ATATGCTAGTTGTGCCGTCAATGTACATAGAGCTACCATTTCTGCGATCGGAAGACGTAT
TACTGCGGCATTATCTTTACCAAGTCTGGCAACCATGGT