Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006822_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:217284796:217286250:-1 gene:Zm00001d006822 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein PNM1 mitochondrial
Sequence	ATGTGGCGCCGCCACCACCTCCTCCGGCTACTTCCGCCTCCGGCCACCGCCGCTACCGCC GCGGCCCCTTCCCACTTCCTGCGCTACCTCTCTACCTCAAGCACCCCGACCCCGGCCGCC TCCCTGGCCTCGTCCCTCGCGTCGGCGCTCACTGCGCTCTCCACGACCCCGCCCCCCGCC ACCACCCCGGACGCTTACTTCTCCCTCCACTTCTCCGACGTGCGGCCTACCAACGCGCTC CTCGCCGAGGCGCTCGCGCTCTCCCCGCCCGCCACCTCCCGCGCCGCTGCCGATCTCTTC CGCTTCCTCGTCCGCCGCCGCTCGCTCCACCCCTCCGACGGCGCGCTCGCGCCCATCGTT CGCCACCTCGCCCGCCGCCGCGACTTCCCCGCCGTGCGCGCGCTCATCCAGGAGTTTCCA ACCGCTCTCGGGCCCACCACGCTCGACGCCTATCTCCAGCAGCTCACCAGAGCCGGGCGC CCAACGGACGCTGTCAAGGTGTTCGACGAATTGCCGGAGCAGCTCCGTAACCGCGAGGCT CTCACTTTGCTGGTCTCCTCGCTTTCTTCCGAGGGATTCCCCTCGCACGCAGAGCGAGCT GCCAAGAAGGTCGCCAGTGAGATCTTCCCAGATGATAATATCTGCACTTTGCTTGTATCT GGTTATGCCAATGCTGGTAAGCTCGACCATGCGCTAAGGTTGATTGGTGAGACACGTAGA GGTGGGTTCCATCCAGGATTGGATGCGTATAATGCTGTTCTTGATTGTGTCTGCCGGCTC TGTCGCAAGAAGGATCCACTGAGGATGCCAATAGAAGCGGAGAAGTTCTTAGTTGACATG GAAGCAAATGGGATTCCTCGTGATGCAGGCACATTTCGGGTTCTGATCACAAATTTTTGC AAGATCCGCAAGACAGGGGATGCCATGAATCTGTTCCAGCGTATGGGTGAGTGGGGCTGC TCACCGGATGCTGACACGTACTTGGTGCTCATTAGGAGCTTGTACCAAGCTGCCCGAACT TCAGAGGGGGATGAAATGATAACGTGGATGCGGTCTGCAGGATTTGGAGATAAACTTGAT AGGAAGGCATATTATGGATTCATCAAGATTTTATGTGGGATTGAGAGGGTTGAGCATGCT GTCAAGGTATTCCGTATGATGAAAGGTTATGGGCATGCTCCTGGAGTAAAATCATATACC TTGCTCATTGAGAAGCTGGCCAGACACAATTTAGGGGATCGTTCTAATGCACTTTTCAGG GAGGCAGTTGCACGTGGTGTACCTGTGGCACAAGGAGAGTACAATGTTGACAAAAGGTAT GTCAAGACAAAGAAGGAGAAGACGGTGAAGAAGAGGCTGACTTTGCCAGAGAAGATGAGA TTGAAGAGCAAGAGGTTATACAAGCTCAGAATGAGCTTTGTCAAGAAGCCCAAGCGTCGA ATGCTCCGGGTTTAA

Peptide Sequence

PEP ID	Zm00001d006822_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:217284796:217286250:-1 gene:Zm00001d006822 transcript:Zm00001d006822_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein PNM1 mitochondrial
Sequence	MWRRHHLLRLLPPPATAATAAAPSHFLRYLSTSSTPTPAASLASSLASALTALSTTPPPA TTPDAYFSLHFSDVRPTNALLAEALALSPPATSRAAADLFRFLVRRRSLHPSDGALAPIV RHLARRRDFPAVRALIQEFPTALGPTTLDAYLQQLTRAGRPTDAVKVFDELPEQLRNREA LTLLVSSLSSEGFPSHAERAAKKVASEIFPDDNICTLLVSGYANAGKLDHALRLIGETRR GGFHPGLDAYNAVLDCVCRLCRKKDPLRMPIEAEKFLVDMEANGIPRDAGTFRVLITNFC KIRKTGDAMNLFQRMGEWGCSPDADTYLVLIRSLYQAARTSEGDEMITWMRSAGFGDKLD RKAYYGFIKILCGIERVEHAVKVFRMMKGYGHAPGVKSYTLLIEKLARHNLGDRSNALFR EAVARGVPVAQGEYNVDKRYVKTKKEKTVKKRLTLPEKMRLKSKRLYKLRMSFVKKPKRR MLRV

Transcript Sequence

Transcript ID	Zm00001d006822_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:217284796:217286250:-1 gene:Zm00001d006822 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein PNM1 mitochondrial
Sequence	ATGTGGCGCCGCCACCACCTCCTCCGGCTACTTCCGCCTCCGGCCACCGCCGCTACCGCC GCGGCCCCTTCCCACTTCCTGCGCTACCTCTCTACCTCAAGCACCCCGACCCCGGCCGCC TCCCTGGCCTCGTCCCTCGCGTCGGCGCTCACTGCGCTCTCCACGACCCCGCCCCCCGCC ACCACCCCGGACGCTTACTTCTCCCTCCACTTCTCCGACGTGCGGCCTACCAACGCGCTC CTCGCCGAGGCGCTCGCGCTCTCCCCGCCCGCCACCTCCCGCGCCGCTGCCGATCTCTTC CGCTTCCTCGTCCGCCGCCGCTCGCTCCACCCCTCCGACGGCGCGCTCGCGCCCATCGTT CGCCACCTCGCCCGCCGCCGCGACTTCCCCGCCGTGCGCGCGCTCATCCAGGAGTTTCCA ACCGCTCTCGGGCCCACCACGCTCGACGCCTATCTCCAGCAGCTCACCAGAGCCGGGCGC CCAACGGACGCTGTCAAGGTGTTCGACGAATTGCCGGAGCAGCTCCGTAACCGCGAGGCT CTCACTTTGCTGGTCTCCTCGCTTTCTTCCGAGGGATTCCCCTCGCACGCAGAGCGAGCT GCCAAGAAGGTCGCCAGTGAGATCTTCCCAGATGATAATATCTGCACTTTGCTTGTATCT GGTTATGCCAATGCTGGTAAGCTCGACCATGCGCTAAGGTTGATTGGTGAGACACGTAGA GGTGGGTTCCATCCAGGATTGGATGCGTATAATGCTGTTCTTGATTGTGTCTGCCGGCTC TGTCGCAAGAAGGATCCACTGAGGATGCCAATAGAAGCGGAGAAGTTCTTAGTTGACATG GAAGCAAATGGGATTCCTCGTGATGCAGGCACATTTCGGGTTCTGATCACAAATTTTTGC AAGATCCGCAAGACAGGGGATGCCATGAATCTGTTCCAGCGTATGGGTGAGTGGGGCTGC TCACCGGATGCTGACACGTACTTGGTGCTCATTAGGAGCTTGTACCAAGCTGCCCGAACT TCAGAGGGGGATGAAATGATAACGTGGATGCGGTCTGCAGGATTTGGAGATAAACTTGAT AGGAAGGCATATTATGGATTCATCAAGATTTTATGTGGGATTGAGAGGGTTGAGCATGCT GTCAAGGTATTCCGTATGATGAAAGGTTATGGGCATGCTCCTGGAGTAAAATCATATACC TTGCTCATTGAGAAGCTGGCCAGACACAATTTAGGGGATCGTTCTAATGCACTTTTCAGG GAGGCAGTTGCACGTGGTGTACCTGTGGCACAAGGAGAGTACAATGTTGACAAAAGGTAT GTCAAGACAAAGAAGGAGAAGACGGTGAAGAAGAGGCTGACTTTGCCAGAGAAGATGAGA TTGAAGAGCAAGAGGTTATACAAGCTCAGAATGAGCTTTGTCAAGAAGCCCAAGCGTCGA ATGCTCCGGGTTTAA