Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006780_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:2:216492050:216503273:1 gene:Zm00001d006780 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	ATGAAGGAAATTAGCTCAACAATATATGATGCCAGCAGGAACAAGATTGCTAGGAAATTC AATTCCATTTACTTGAATAAGGGTTCCTCGGAATCTGCTGTTCTTGCAGCTGGTTCTGTC ATAGAGGTAGCTGAGAAAGTTGCTGCAGGTGAGTTAAGTTCTGCTATTGCTCTAGTCAGA CCTCCAGGCCACCATGCAGAACATGATGAGGCTATGGGATTTTGCCTCTTCAACAATGTG GCAGTTGCAGCTAATTATCTCTTAAACGAGAGGCCTGATTTAGGTATCAAGAAGATATTG ATTGTCGATTGGGATGTTCACCATGGAAATGGCACACAGAAAATGTTTTACGATGATCCT CGTGTATTGTTCTTCTCAGTTCACAGATTTGATTATGGAAGCTTCTATCCTTCTGAAGGG GATGCTTCTCATTGTTTCATCGGGGAAGAAGCTGGTAAAGGGTATAACATCAATGTTCCC TGGGAGCATGGCAAGTGTGGTGATGCTGATTATATTGCTGCATGGGACCATGTACTGCTT CCTGTCACTAAAGTTTTTGATCCTGATATAATTCTGGTATCAGCGGGGTTTGATGCAGCA TTGGGTGATCCTCTCGGTGGGTGCTGCATTACACCAAATGGATATGCACTGCTACTAACA AAGTTGTTAGGATTTGCTCAAGGAAGGATAGTGATGGCCCTTGAAGGAGGTTATAACCTT AGGTCCATAGCGAACTCAGTTTGTGCTTGTGCAAAAGTTCTCTTGGGAGACAAATTCACA TTCAACACTCCAGAGATGCAACCATTTGAATCTACATGGAGAGTAATACAAGCGGTACGC AATGAATTGAAGACATGCTGGCCTGTTCTGAGTAGCAAGTTGCCAGAAAATGTATCATTG AGGATTAAGCCTGCACCAAGCGAGCTCTACGCTTCTGATTCTGAATCTGATAGTGAAGAT GTTGATGAGCTCCTTGGCACTGTTGCATCTGTCAGTGTTATTGAAGCTACTGGTGTTGCT ATAAGTGAACACCTCTCAAAGATGAAACTTGATGATGACAGCCTTGCAGTGAAGACTAAC TCAAGTTGCTCAGCAGCAGAACAGCATCCAGTTGATTCAGTAAAAGTACATAACAATGCA TCTGTTGTGCTGACCAAAAAAATATCTGATTTATCTCTTGAGTGGCGATCAGATTTATCG AAAACTGATGTCTGGTATGCCAGTTTTGGATCAAACATGTGGAGACCAAGATTTCTATGT TATATTCAAGGAGGGAAGGCTGAGGGTATGAATATACCATGCTGCGGATCACGTGACACA AGCTCACCAAAAGGAACCGTGTGGAAGACTGTACCTCACAGGTTGCTTTTCGGTAGATCG TCTACCCCTTGTTGGGGAACTGGTGGTGTGGCTTTTCTCAACCCTGAGATAAACTACAAT GAGAAGTCGTATGTCTGCATGTACAAAATAACGTTGGAGCAGTTCAATGACATCTTGTTT CAGGAGAATCGTTTAGTGCTGGAGGATGGCAAAGACGGAAACACTGTGTATCCTGACTCT CCTTTGATTGGTTCATCTGAAATCAAGTTTATATCTACAAACAGAGCTGTTCATCTTGAA CCTATTAAGGATAGCTGGTACTCCAATGTACTTTATCTTGGGAATGAGGATGAAGTTCCA ATTCTAACTATGACGTGCCCCGCATCAGATATTGAGAGGTATAAATCTGGTGAGCTGCGT TTAGCACCTCCATCAGAGACGTATGCGGCCACTCTGATAAAGGGACTAGTGGAAGGCAAG CAAATGGATGCGGACGGAGCTGCCAGCTACATCAACGCTGCTGCTGCAAGAGCCTTGTGA

Peptide Sequence

PEP ID	Zm00001d006780_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:2:216492050:216503273:1 gene:Zm00001d006780 transcript:Zm00001d006780_T018 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	MKEISSTIYDASRNKIARKFNSIYLNKGSSESAVLAAGSVIEVAEKVAAGELSSAIALVR PPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQKMFYDDP RVLFFSVHRFDYGSFYPSEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIAAWDHVLL PVTKVFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNL RSIANSVCACAKVLLGDKFTFNTPEMQPFESTWRVIQAVRNELKTCWPVLSSKLPENVSL RIKPAPSELYASDSESDSEDVDELLGTVASVSVIEATGVAISEHLSKMKLDDDSLAVKTN SSCSAAEQHPVDSVKVHNNASVVLTKKISDLSLEWRSDLSKTDVWYASFGSNMWRPRFLC YIQGGKAEGMNIPCCGSRDTSSPKGTVWKTVPHRLLFGRSSTPCWGTGGVAFLNPEINYN EKSYVCMYKITLEQFNDILFQENRLVLEDGKDGNTVYPDSPLIGSSEIKFISTNRAVHLE PIKDSWYSNVLYLGNEDEVPILTMTCPASDIERYKSGELRLAPPSETYAATLIKGLVEGK QMDADGAASYINAAAARAL

Transcript Sequence

Transcript ID	Zm00001d006780_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:216492050:216503273:1 gene:Zm00001d006780 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:histone deacetylase description: histone deacetylase
Sequence	CGGGGAGGAACACCCGGAGAACCCCGAGCGGCTGCGCTCCATCTGGCGCAAGCTCAACGC CGCGGGCGTCGCGTCCAGGTATGGCGCCAGAGGCCGCCCTCCCGCGCCCTTGTGTCGAGC TGTGAGAGTCGTGGTTTTGGTAGGGATGGGTGACTTGCACGGCGAACCGGTGCCCTTGGT GTTCCTTTTCCGTTCGAATTGCCTGGAACGAAACGAAAGCCTCCGCCGCCTGTGGGCCCA TGACTCTTGCTTGACTCTGCTCTGAGTGCTCTCCCGATGTTGTTGCTGTGGCGGCCCATT TCGATCTGAAAATAACTTTATGAAACATTTGTGTTGAGCACCATATTTGGCACCTGGCAT GGCCGGCCTCTACGGTCCGCACCCTCGCGACCAGATGAGAACGGGCGAGAATATTTATCT TCATGCGTGGTTATCCTAATCTATCAATGGAATCCGTTAGATCTCGCCTATGAACAGTTA CAGACCTACTCCCCCATAAATATAAACGGGTACGACCGATTAAGAACACCCGAACATATT CAATCGAACTAATCTGCTTTATCTACCTTTCTTTATCAGTTCTGCCATATGAGTAGATGT AACATATTTTTAGTTGTAGCTTTCTATATATCTACATGCACCCCTATTCGACTCTACGTC GACTAGATCCGACTTAGTTGGCCTGCCGATCCCAAGACGACCCTTGGATCTCACCCTAAC AAACCTGGTCATCTGCTAGGAGGGTGAATGTCTTTAGGTCTCTTCCTCGAGCTGATTTTT TAATCCTTAGGCAACATTACACCATCTGGGGACGCCCCGGATGGCCTGCTGACCCGAAGC ACCTAGGATCTCTCCCTAGGGGGCGAGATATACATTCCCGCGAGGAGGAAGACGACACTG CGCCATTGTGGACCGTCCCGCACAGAGCGCGGATCGTCCGGAGCGACGCAGGGAAGGAGC CGCTCCTACAGTGAAATCGCGGACCGTCCGACTCAGGGCCGCGGACCGTCCGCGCTGCTG CAGAGGGCACCGCCAGGCGGTACATCTCTAGTGACTGGCGCCCAGATCGGTGCCAACAAT TTGGTTCAAACAATGCATCATTTTTTTTAAAAAACCGCTTTCGGTTGCACACCATGAAGT TGTTTATAGTATTCTAGATGCATGTGTTGCTTTAAGTTCGATGCTAGTAAACTAAACTTT AAACGCCAACTTTACAGCTTTGTTATGTTGATCTGGTTCACTATTTTGCTTAGCTAGTTA GGGTAGTATTTTTTTTCTTATATATTGAGGACAGCGGTGGGGTTCAGCAATGCTACTGTA ACATAATTCTCTTCCAGGTGTGTGGCCCTTAAGGCAAAGGAAGCTGAGGACAAGTATATA GCTTCTGTTCACAGCAAGAGGCATATAAAGCTGATGAAGGAAATTAGCTCAACAATATAT GATGCCAGCAGGAACAAGATTGCTAGGAAATTCAATTCCATTTACTTGAATAAGGGTTCC TCGGAATCTGCTGTTCTTGCAGCTGGTTCTGTCATAGAGGTAGCTGAGAAAGTTGCTGCA GGTGAGTTAAGTTCTGCTATTGCTCTAGTCAGACCTCCAGGCCACCATGCAGAACATGAT GAGGCTATGGGATTTTGCCTCTTCAACAATGTGGCAGTTGCAGCTAATTATCTCTTAAAC GAGAGGCCTGATTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCACCATGGA AATGGCACACAGAAAATGTTTTACGATGATCCTCGTGTATTGTTCTTCTCAGTTCACAGA TTTGATTATGGAAGCTTCTATCCTTCTGAAGGGGATGCTTCTCATTGTTTCATCGGGGAA GAAGCTGGTAAAGGGTATAACATCAATGTTCCCTGGGAGCATGGCAAGTGTGGTGATGCT GATTATATTGCTGCATGGGACCATGTACTGCTTCCTGTCACTAAAGTTTTTGATCCTGAT ATAATTCTGGTATCAGCGGGGTTTGATGCAGCATTGGGTGATCCTCTCGGTGGGTGCTGC ATTACACCAAATGGATATGCACTGCTACTAACAAAGTTGTTAGGATTTGCTCAAGGAAGG ATAGTGATGGCCCTTGAAGGAGGTTATAACCTTAGGTCCATAGCGAACTCAGTTTGTGCT TGTGCAAAAGTTCTCTTGGGAGACAAATTCACATTCAACACTCCAGAGATGCAACCATTT GAATCTACATGGAGAGTAATACAAGCGGTACGCAATGAATTGAAGACATGCTGGCCTGTT CTGAGTAGCAAGTTGCCAGAAAATGTATCATTGAGGATTAAGCCTGCACCAAGCGAGCTC TACGCTTCTGATTCTGAATCTGATAGTGAAGATGTTGATGAGCTCCTTGGCACTGTTGCA TCTGTCAGTGTTATTGAAGCTACTGGTGTTGCTATAAGTGAACACCTCTCAAAGATGAAA CTTGATGATGACAGCCTTGCAGTGAAGACTAACTCAAGTTGCTCAGCAGCAGAACAGCAT CCAGTTGATTCAGTAAAAGTACATAACAATGCATCTGTTGTGCTGACCAAAAAAATATCT GATTTATCTCTTGAGTGGCGATCAGATTTATCGAAAACTGATGTCTGGTATGCCAGTTTT GGATCAAACATGTGGAGACCAAGATTTCTATGTTATATTCAAGGAGGGAAGGCTGAGGGT ATGAATATACCATGCTGCGGATCACGTGACACAAGCTCACCAAAAGGAACCGTGTGGAAG ACTGTACCTCACAGGTTGCTTTTCGGTAGATCGTCTACCCCTTGTTGGGGAACTGGTGGT GTGGCTTTTCTCAACCCTGAGATAAACTACAATGAGAAGTCGTATGTCTGCATGTACAAA ATAACGTTGGAGCAGTTCAATGACATCTTGTTTCAGGAGAATCGTTTAGTGCTGGAGGAT GGCAAAGACGGAAACACTGTGTATCCTGACTCTCCTTTGATTGGTTCATCTGAAATCAAG TTTATATCTACAAACAGAGCTGTTCATCTTGAACCTATTAAGGATAGCTGGTACTCCAAT GTACTTTATCTTGGGAATGAGGATGAAGTTCCAATTCTAACTATGACGTGCCCCGCATCA GATATTGAGAGGTATAAATCTGGTGAGCTGCGTTTAGCACCTCCATCAGAGACGTATGCG GCCACTCTGATAAAGGGACTAGTGGAAGGCAAGCAAATGGATGCGGACGGAGCTGCCAGC TACATCAACGCTGCTGCTGCAAGAGCCTTGTGAAGGCGGCTTCAGCGTGTGCTTTTGTAC AGCCAGTAAGGAGTAGCAAGGATACACTATCTGTTAGCGTGGCGACACCAGGAAACCTTC ATTGTCCGCAAATGGAGAACTTGGATCCAATTTGAATTGGGAAGCATGATTCGAGCTTGC CCTAGCTTGATTACTGGTGAACGGTGATCTCCCCTGGCTGGTTGATTCTGGGAGAAACAC TAGCTGTGTCGGGGTGGAGCAACACTAGTTGGCGGTTGCAACAGGTGCTCTCACTGCACT GGTATCGTGCTTGTCTGACATACCGTAGTATTTGCATGGCATGCTG