Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006752_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:215863053:215868900:-1 gene:Zm00001d006752 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	ATGTCTCTCTCCCTCTTCTCTGACGTCGCTGATTATTATTGGTTTTGTTGCAAAATGGAT ACAGAAGCGACTTTAAACAAGTCTGGTGGTTCTGAATCTGTAATGTCATTACTGGAACAG CTTGCTGAAGTATTTGGAAACTTGAAATCCCACACCGAAGCATTTCTGCAATTGCAGAAT GGTATGCAATGGGAAGATATCAAAGGGCATTTCCTCAGCCTTGATAAGTCGTATGGAAGC AAGTTTGATGAATTGGTAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAAGCTTGT AGGTTGATTGCAGAGAAAGAGGCTGATATTTCTATAAAAGAGCGTGCCTCCCTGAATCAG CTTCAGGAGCTAAGGGATGCTGCTGTCTCTTCTCTAGCAGAGGTTCGGCAAAAATATAAG GTGGAGCTTGCTGAGATACTCGATACCAGTGAAAGCAAATACAAAAAGGTAAGCACCTCA ATCAATGACAGCAATGCATCTCTTGCTTCAGAGGAGAATACCCTTGCTACTGGGTCAGGC GAGGCATCTGAAGCTTCACCTGTTGAGACTAAGCCGCGTTCTGTATTGAAGCAACTGTGC GAGCAGATGGACACCAAAGGCCTTTTAAAATTTCTTTCAGTAAATTGTAGAAAACTTGCT ACTGCTAGCCTTCGTGCTGAACTTTCTGTTGCACTAAAATGTGCAACTGACCCTGCCCGC TTAGTACTTAATTCTCTGGAGGGTTTCTTCCCACCAGAACAAACAAATTCACCTGGGAGT GAACATAACGGCCTTCAGGTCCAGCGCAAGAGCTGCATTGTTTTAATGGATGCTATAGCA CCTGCACTAGGGACGAAGGAGCCTGGTGGCAACGACCCTTGGAGCTCTGAAATTAAAGAG CAAGCCAAGGCAATTGCCGAAGAGTGGAAGAGTAAGTTAGCTGAGGTTGACCTGGATGCT TCTAATGGTTATTCATTGGAGGCACAGGCTTTTCTGCAGCTTCTTACAACTTTTAATGTT GATTCGGTGCTTGACGAAGATGAACTATGCAAGATCGTAGTTGCTGTCTCTCGTCGCAAG CAGACTGCTGTGTCCTGTCGCTCTCTTGGTCTTAATGAAAAAATACCAGGTATCATTGAG GAGTTGGTTAAGAGGCACAGGCAAATTGATGCAGTTCATTTCATACAAGCTTTCGGGCTT TCAGAGACATTCCCCCCTGCACCACTGCTGAAGACCTATATTGAGGAGTTTAAGGATACA ATTGAAAATAATGGGGATGCAACTGTGTCCCTGTTAAAGGACGACCCAAAATCTAGGGAG CTACTCACTTTGAGGGCTGTGATAAAGTGTATCGAGGAGTACAAGCTTCAGAAGGAGTAT TCACTTGGACCTCTCCAAAAGCGTGTTTCTGAGCTAAAGCCTAAGGGTGAGAAAAGGCCA TCAACTGATGCTGGTGGGCGTACTTATGCAAAGAAGCCTCGAGGCCCTGGCATTTCATTT ACCAGGAGACCTGGCGGTTCCATTGGTTCAGCTGCTCGCAGGCCTCCATTTCCGGGCTAT AGCTGGCAGCGTGCTCCTGCGCCAATGCCTTCCCATGGTCCTGCACCAATGCCCTCCCGT GCCCCTCTTCCTGATGGATATGGAGCTGCTGACCGGTACCATTACACGCCACCAGCCCCA GCATATGATGCAGGCGCATTTTCTTCTTACGGTGAGCCGTTCAGCACCCCAAAACCATTC CAGTATGCCCCAGGGTCAGTGGCAGCATCGTACAACTCGAGTCCCTATAAAATCGCGTAT GGTGGCCCGGGAGCGCCAGCTGCAAGCGCATATGCAGGTTATTCCGGTGGGGCCCAAGCA CCAGCTGCAAGCGCCTATACAGGTTATTCCGGCGGGTCCGGTCCGGCAGCTTCTAGCAGC TATGCAAACTATCTGGGATCCGTCTATTGCCCTCCCCAGCAACCATAG

Peptide Sequence

PEP ID	Zm00001d006752_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:215863053:215868900:-1 gene:Zm00001d006752 transcript:Zm00001d006752_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	MSLSLFSDVADYYWFCCKMDTEATLNKSGGSESVMSLLEQLAEVFGNLKSHTEAFLQLQN GMQWEDIKGHFLSLDKSYGSKFDELVEKQKALEEKKAEACRLIAEKEADISIKERASLNQ LQELRDAAVSSLAEVRQKYKVELAEILDTSESKYKKVSTSINDSNASLASEENTLATGSG EASEASPVETKPRSVLKQLCEQMDTKGLLKFLSVNCRKLATASLRAELSVALKCATDPAR LVLNSLEGFFPPEQTNSPGSEHNGLQVQRKSCIVLMDAIAPALGTKEPGGNDPWSSEIKE QAKAIAEEWKSKLAEVDLDASNGYSLEAQAFLQLLTTFNVDSVLDEDELCKIVVAVSRRK QTAVSCRSLGLNEKIPGIIEELVKRHRQIDAVHFIQAFGLSETFPPAPLLKTYIEEFKDT IENNGDATVSLLKDDPKSRELLTLRAVIKCIEEYKLQKEYSLGPLQKRVSELKPKGEKRP STDAGGRTYAKKPRGPGISFTRRPGGSIGSAARRPPFPGYSWQRAPAPMPSHGPAPMPSR APLPDGYGAADRYHYTPPAPAYDAGAFSSYGEPFSTPKPFQYAPGSVAASYNSSPYKIAY GGPGAPAASAYAGYSGGAQAPAASAYTGYSGGSGPAASSSYANYLGSVYCPPQQP

Transcript Sequence

Transcript ID	Zm00001d006752_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:215863053:215868900:-1 gene:Zm00001d006752 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 3
Sequence	AGGTACCTCAACCTCTTCTCTCCATCCATCTCTGCCCTGTGCACTCCTCGCGTGAGGCAG CATGTCCGCAGCTGCTCTGTCTCCCGTCCTCTCGTTCTCACGCAGTAGAAGATGTCTCTC TCCCTCTTCTCTGACGTCGCTGATTATTATTGGTTTTGTTGCAAAATGGATACAGAAGCG ACTTTAAACAAGTCTGGTGGTTCTGAATCTGTAATGTCATTACTGGAACAGCTTGCTGAA GTATTTGGAAACTTGAAATCCCACACCGAAGCATTTCTGCAATTGCAGAATGGTATGCAA TGGGAAGATATCAAAGGGCATTTCCTCAGCCTTGATAAGTCGTATGGAAGCAAGTTTGAT GAATTGGTAGAGAAGCAGAAGGCATTAGAAGAAAAGAAAGCTGAAGCTTGTAGGTTGATT GCAGAGAAAGAGGCTGATATTTCTATAAAAGAGCGTGCCTCCCTGAATCAGCTTCAGGAG CTAAGGGATGCTGCTGTCTCTTCTCTAGCAGAGGTTCGGCAAAAATATAAGGTGGAGCTT GCTGAGATACTCGATACCAGTGAAAGCAAATACAAAAAGGTAAGCACCTCAATCAATGAC AGCAATGCATCTCTTGCTTCAGAGGAGAATACCCTTGCTACTGGGTCAGGCGAGGCATCT GAAGCTTCACCTGTTGAGACTAAGCCGCGTTCTGTATTGAAGCAACTGTGCGAGCAGATG GACACCAAAGGCCTTTTAAAATTTCTTTCAGTAAATTGTAGAAAACTTGCTACTGCTAGC CTTCGTGCTGAACTTTCTGTTGCACTAAAATGTGCAACTGACCCTGCCCGCTTAGTACTT AATTCTCTGGAGGGTTTCTTCCCACCAGAACAAACAAATTCACCTGGGAGTGAACATAAC GGCCTTCAGGTCCAGCGCAAGAGCTGCATTGTTTTAATGGATGCTATAGCACCTGCACTA GGGACGAAGGAGCCTGGTGGCAACGACCCTTGGAGCTCTGAAATTAAAGAGCAAGCCAAG GCAATTGCCGAAGAGTGGAAGAGTAAGTTAGCTGAGGTTGACCTGGATGCTTCTAATGGT TATTCATTGGAGGCACAGGCTTTTCTGCAGCTTCTTACAACTTTTAATGTTGATTCGGTG CTTGACGAAGATGAACTATGCAAGATCGTAGTTGCTGTCTCTCGTCGCAAGCAGACTGCT GTGTCCTGTCGCTCTCTTGGTCTTAATGAAAAAATACCAGGTATCATTGAGGAGTTGGTT AAGAGGCACAGGCAAATTGATGCAGTTCATTTCATACAAGCTTTCGGGCTTTCAGAGACA TTCCCCCCTGCACCACTGCTGAAGACCTATATTGAGGAGTTTAAGGATACAATTGAAAAT AATGGGGATGCAACTGTGTCCCTGTTAAAGGACGACCCAAAATCTAGGGAGCTACTCACT TTGAGGGCTGTGATAAAGTGTATCGAGGAGTACAAGCTTCAGAAGGAGTATTCACTTGGA CCTCTCCAAAAGCGTGTTTCTGAGCTAAAGCCTAAGGGTGAGAAAAGGCCATCAACTGAT GCTGGTGGGCGTACTTATGCAAAGAAGCCTCGAGGCCCTGGCATTTCATTTACCAGGAGA CCTGGCGGTTCCATTGGTTCAGCTGCTCGCAGGCCTCCATTTCCGGGCTATAGCTGGCAG CGTGCTCCTGCGCCAATGCCTTCCCATGGTCCTGCACCAATGCCCTCCCGTGCCCCTCTT CCTGATGGATATGGAGCTGCTGACCGGTACCATTACACGCCACCAGCCCCAGCATATGAT GCAGGCGCATTTTCTTCTTACGGTGAGCCGTTCAGCACCCCAAAACCATTCCAGTATGCC CCAGGGTCAGTGGCAGCATCGTACAACTCGAGTCCCTATAAAATCGCGTATGGTGGCCCG GGAGCGCCAGCTGCAAGCGCATATGCAGGTTATTCCGGTGGGGCCCAAGCACCAGCTGCA AGCGCCTATACAGGTTATTCCGGCGGGTCCGGTCCGGCAGCTTCTAGCAGCTATGCAAAC TATCTGGGATCCGTCTATTGCCCTCCCCAGCAACCATAGATTCGCTTCATCTCTCTCAGA AATGTTGTGCTGGTTATAAGGTGTGTTGTGCTGGTGATAAGGTGTAACTTTACTCTCTTT TCTTTTTGACTCATCCACAGCACTGGGTTTTGGGTTTTGGAGGTGTAACTGATGTAGTCC AGTTTCTTTGGAAGCTGTGTGAGGCGCCGGTCAAAATATGAGTGTTCTCATGTGCACTCG TATTTACCTTTAGCTGTGCTTATTCCTTAGGATGTTTATATCTTTCTGTCAACAAGTCTG TCTTATGTAGGAAAGTCTGTCCCATGTACTCCAGGAACATGTAACTTTTTTACTTGCTAA TGTTGTGATTGAGCTGGAAAAGC