Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006678_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:214097373:214099059:-1 gene:Zm00001d006678 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase1 description: geranylgeranyl pyrophosphate synthase1
Sequence	ATGGCCATGTCGTTCCACTTCCACCCGCTGGCCGCCTCGCGCGTCCACTTCTCCCCACTC CCGTTCGCCGCCGCCGCGGGGGCGCCCTCCCCCTCCTCCTCCGTCGCCATCGCGGCGCAC CACCAGCACGGTCGCCGCCGCTTCTCCGCCATCGTGGCCACGGCGGCCGCCGCGTCGGCG GCGACCACGGAGTTCGACTTCAAGGCGTACATGGGGGAGCGCGCGGTCGCGGTGAACCGG GCCCTGGACGCGGCCGTCCCCGCCGGGGAGCCCCCCGCGGCGCTGCACGACGCGATGCGT TACGCGCTGCTGGCGGGCGGGAAGCGCGTGCGCCCCGCGCTGTGCCTGGCCGCGTGCGCC GTGGTGGGCGGGCCGGAGCCCTGGGCCATGCCGGCCGCGGCGGCCGTCGAGATGGTGCAC ACCATGTCGCTCGTCCACGACGACCTCCCCTGCATGGACGACGACGACCTCCGCCGCGGC AAGCCCACCTGCCACGTCGTCTACGGCGAGCCCATCGCCGTCCTCGCCGGGGACGCGCTG CTCTCGCTCTCCTTCCACCACATGGCCAGCGTCGGGTCCTACCCTCCGGACGTGGACCCG GAGAAGCACCCCGCCCGCGTCGTCCGAGCCATTGGGGAGCTCGCGCGCTGCATCGGATCC GAGGGACTCGTCGCCGGCCAGGTTGTCGATCTCGAGATGACGGGCACATCAGAGACGGTG CCCCTCGAACGCCTCGAGTACATCCACCTCCACAAGACCGCCGCATTGCTCGAGGCCTCG GTGGTGATTGGGGCGATCATCGGAGGCGGCACGGACGAGCAGATCGAGAGGCTGCGGAAG TACGCGAGGTCGATCGGGCTGCTGTTCCAGGTGGTCGACGACATACTCGATGTCACCAAG TCGTCAGAGGAGCTCGGCAAGACGGCGGGGAAGGACCTGGCAAGCGACAAAACGACGTAC CCGAAGCTGCTGGGGCTAGAAAAGTCGCGGGAGTTCGCGGAGGAGTTGCTCTCTGATGCC GTAGAGCAGCTTGCTTGCTTCGACAAGGAGAAGGCAGCGCCTCTGTTGCATCTGGCCAAC TATATCGCCCATAGGCAGAACTGA

Peptide Sequence

PEP ID	Zm00001d006678_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:214097373:214099059:-1 gene:Zm00001d006678 transcript:Zm00001d006678_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase1 description: geranylgeranyl pyrophosphate synthase1
Sequence	MAMSFHFHPLAASRVHFSPLPFAAAAGAPSPSSSVAIAAHHQHGRRRFSAIVATAAAASA ATTEFDFKAYMGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACA VVGGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDAL LSLSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETV PLERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTK SSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLAN YIAHRQN

Transcript Sequence

Transcript ID	Zm00001d006678_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:214097373:214099059:-1 gene:Zm00001d006678 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:geranylgeranyl pyrophosphate synthase1 description: geranylgeranyl pyrophosphate synthase1
Sequence	CACCGCCCGGGCGGCCACTCCACTTCCTCCCCTGCTGCACTGACGCGCCCAGCGCCAAAG CATCCTTTCACCTCAAAGATAAGGAGGCCGTAACCTGTCGGGGCCCTCCCCCAATCTCCA GCGACGCCGTCCCCCCCAACTCGCCACCCATGGCCATGTCGTTCCACTTCCACCCGCTGG CCGCCTCGCGCGTCCACTTCTCCCCACTCCCGTTCGCCGCCGCCGCGGGGGCGCCCTCCC CCTCCTCCTCCGTCGCCATCGCGGCGCACCACCAGCACGGTCGCCGCCGCTTCTCCGCCA TCGTGGCCACGGCGGCCGCCGCGTCGGCGGCGACCACGGAGTTCGACTTCAAGGCGTACA TGGGGGAGCGCGCGGTCGCGGTGAACCGGGCCCTGGACGCGGCCGTCCCCGCCGGGGAGC CCCCCGCGGCGCTGCACGACGCGATGCGTTACGCGCTGCTGGCGGGCGGGAAGCGCGTGC GCCCCGCGCTGTGCCTGGCCGCGTGCGCCGTGGTGGGCGGGCCGGAGCCCTGGGCCATGC CGGCCGCGGCGGCCGTCGAGATGGTGCACACCATGTCGCTCGTCCACGACGACCTCCCCT GCATGGACGACGACGACCTCCGCCGCGGCAAGCCCACCTGCCACGTCGTCTACGGCGAGC CCATCGCCGTCCTCGCCGGGGACGCGCTGCTCTCGCTCTCCTTCCACCACATGGCCAGCG TCGGGTCCTACCCTCCGGACGTGGACCCGGAGAAGCACCCCGCCCGCGTCGTCCGAGCCA TTGGGGAGCTCGCGCGCTGCATCGGATCCGAGGGACTCGTCGCCGGCCAGGTTGTCGATC TCGAGATGACGGGCACATCAGAGACGGTGCCCCTCGAACGCCTCGAGTACATCCACCTCC ACAAGACCGCCGCATTGCTCGAGGCCTCGGTGGTGATTGGGGCGATCATCGGAGGCGGCA CGGACGAGCAGATCGAGAGGCTGCGGAAGTACGCGAGGTCGATCGGGCTGCTGTTCCAGG TGGTCGACGACATACTCGATGTCACCAAGTCGTCAGAGGAGCTCGGCAAGACGGCGGGGA AGGACCTGGCAAGCGACAAAACGACGTACCCGAAGCTGCTGGGGCTAGAAAAGTCGCGGG AGTTCGCGGAGGAGTTGCTCTCTGATGCCGTAGAGCAGCTTGCTTGCTTCGACAAGGAGA AGGCAGCGCCTCTGTTGCATCTGGCCAACTATATCGCCCATAGGCAGAACTGAGAATTTG AGGTGACTGCGTACTCTATTGTCGGACCTGTTGTGACTTTGTCAGGCCGTCGCCCGTCGA ACTTGGGTTCGAGGAATATATCCAAATCGTCATGTGATGTATACTAGCTGTAGCTCTGTA CCTTGATGGAATGGGGCTGTTTAGTTCGAATTCCAAAAGTATGAAATATCGTATCAAATT ATGAACCCTA