Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006667_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:213889838:213895591:1 gene:Zm00001d006667 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinyl-CoA ligase alpha-chain 2
Sequence	ATGGCCGCCTCCTCCCCCCGCGCGTTGCAATCGCTGGGGTCCGCCGCCTCCCGCTTCCTC CACGCGCGGGGCTTCGCCGCGGCGGCCGCCGCGGCGCCCTCGCCGGCGGTCTTCGTCGAC AAGAGCACCCGCGTGATCTGTCAGGGCATCACGGGGAAGAACGGCACCTTCCACACCGAG CAGGCCATCGAGTACGGCACCAACATGGTTGGTGGAGTGACTCCTAAGAAAGGTGGAACT GAACATTTAGGGCTCCCAGTGTTTAACTCTGTAGCAGAAGCTAAGGCTGAAACAAAAGCC AATGCAACTGTTATATATGTTCCACCACCATTTGCCGCCGCTGCTATAATGGAGGCAATG GAGGCTGAGCTCGACCTTGCCGTCTGCATTACAGAAGGAATACCTCAGCATGACATGGTG AAAGTGAAGGCTGCACTAAACAGCCAGTCTAAAACTCGATTGATTGGGCCAAATTGCCCT GGTATCATTAAGCCTGGTGAGTGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCT GGGCGTATTGGGATCGTATCTCGTTCTGGTACTTTGACATATGAAGCGGTGTTTCAAACA ACAGCTGTAGGATTGGGTCAGTCAACTTGTGTAGGCATTGGTGGTGACCCGTTCAACGGC ACAAATTTTGTTGATTGCCTTGAAAAGTTCGTCAACGACCCTCAGACAGAAGGTATTGTT CTCATTGGTGAAATTGGAGGTACGGCTGAGGAGGATGCTGCGACATTCATCCAGCTATCG TGGCAGGAGGAAAGGGTACTGCCCAGGACAAAATCAAGGCACTCAGAGAGGCAGGTGTTA CCGTTGTCGAGTCACCAGCGAAGATTGGCTCTACCATGTTTGAAATCTTCAAGCAGCGTG GAATGGTAG

Peptide Sequence

PEP ID	Zm00001d006667_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:213889838:213895591:1 gene:Zm00001d006667 transcript:Zm00001d006667_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinyl-CoA ligase alpha-chain 2
Sequence	MAASSPRALQSLGSAASRFLHARGFAAAAAAAPSPAVFVDKSTRVICQGITGKNGTFHTE QAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANATVIYVPPPFAAAAIMEAM EAELDLAVCITEGIPQHDMVKVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKP GRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVNDPQTEGIV LIGEIGGTAEEDAATFIQLSWQEERVLPRTKSRHSERQVLPLSSHQRRLALPCLKSSSSV EW

Transcript Sequence

Transcript ID	Zm00001d006667_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:213889838:213895591:1 gene:Zm00001d006667 gene_biotype:protein_coding transcript_biotype:protein_coding description:Succinyl-CoA ligase alpha-chain 2
Sequence	GAGAAATCGAATCGAGAAGGGAAGAGCACGCGCCGTCGCCAGCACCGCGTCCGCCATGGC CGCCTCCTCCCCCCGCGCGTTGCAATCGCTGGGGTCCGCCGCCTCCCGCTTCCTCCACGC GCGGGGCTTCGCCGCGGCGGCCGCCGCGGCGCCCTCGCCGGCGGTCTTCGTCGACAAGAG CACCCGCGTGATCTGTCAGGGCATCACGGGGAAGAACGGCACCTTCCACACCGAGCAGGC CATCGAGTACGGCACCAACATGGTTGGTGGAGTGACTCCTAAGAAAGGTGGAACTGAACA TTTAGGGCTCCCAGTGTTTAACTCTGTAGCAGAAGCTAAGGCTGAAACAAAAGCCAATGC AACTGTTATATATGTTCCACCACCATTTGCCGCCGCTGCTATAATGGAGGCAATGGAGGC TGAGCTCGACCTTGCCGTCTGCATTACAGAAGGAATACCTCAGCATGACATGGTGAAAGT GAAGGCTGCACTAAACAGCCAGTCTAAAACTCGATTGATTGGGCCAAATTGCCCTGGTAT CATTAAGCCTGGTGAGTGTAAAATTGGAATCATGCCAGGTTACATCCACAAGCCTGGGCG TATTGGGATCGTATCTCGTTCTGGTACTTTGACATATGAAGCGGTGTTTCAAACAACAGC TGTAGGATTGGGTCAGTCAACTTGTGTAGGCATTGGTGGTGACCCGTTCAACGGCACAAA TTTTGTTGATTGCCTTGAAAAGTTCGTCAACGACCCTCAGACAGAAGGTATTGTTCTCAT TGGTGAAATTGGAGGTACGGCTGAGGAGGATGCTGCGACATTCATCCAGCTATCGTGGCA GGAGGAAAGGGTACTGCCCAGGACAAAATCAAGGCACTCAGAGAGGCAGGTGTTACCGTT GTCGAGTCACCAGCGAAGATTGGCTCTACCATGTTTGAAATCTTCAAGCAGCGTGGAATG GTAGAATAGACGATGGTACAGTAGAGACATTGAGAAACCGCATTTTGATGCTCATGGGCA ATTGCGAGCAATTCCTTCCATGGCCTCAAACAAAACTAATGAGGCTACCTTTTCTTACGT GCCTTCTGTTTGGAAGATGGCCTGACTTCACCTGGATCACCTTCCAATGAGCTCATTTCC AATAAGACGTTTCAGAGCC