Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006627_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:212876418:212878508:-1 gene:Zm00001d006627 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-type lectin-domain containing receptor kinase IX.1
Sequence

ATGAGATCAAGGAGCACAACTACTTGGTTTTTGGCTCTCCTCCACTTAATCGTGTTTTGC
AATATCACCGGTGTCAGTTCTCTGTCCTTCAAGCTGAACTTCACTGAGTCAAACAGCAAC
GGAGCAGCCACGATCCAGTTACAGGAGGATGCCTTCTACAACAAGGCGGTCAGGCTTACC
AAGGAAGAGCTGGACGGGCAGATCGCTCACAGTGTGGGCCGAGCAGTCTTGGCAGATCCG
GTGACCCTCTGGGATAGCAGCACTGGTGAGTTAGCTGACTTCACAACCCGCTTCACATTC
ATGATAAAGGCCCGTGTTGCAGATGGCTCGTACGGCGAGGGCCTCGCCTTCTTCCTCTCA
CCGTACCCTTCAGTTGTCCCCAAAAATTCCGAGGATGGTAACCTTGGCCTCTTCGGTAGT
AGCAGCGCCGATCAGAGTAGTGAGACATCCAACCAGATCGTGGCCGTCGAGTTTGACAGC
CACAAGAACCCATGGGATCCGGACGACAACCACGTAGGCATCAACATCCATTCCATCGTG
TCCGTGGATAACGTCACATGGAGAAGCAGCATCAAGGATGGGAAGATGGCCAACGCATGG
GTGACTTACCAGGCCAGCTCCAGGAACCTGAGCGTCTTCCTGACGTACAAGGACAGCCCA
CAGTTCAGCGGCAACTCCTCCCTATCTTATTCAGTTGATCTCAGAAGGTACCTCCCGGAA
AAAGTGGCCATCGGCTTCTCAGCTGCCACTGGCCAGCTGGTAGAGGCCCATCAGATACTT
TACTGGGAGTTCAGTTGCACGGATGTGCGGGTGGTGAAGAGCAAGAAGGCGAAAAGTTTA
TTAGTCATAAGCTTGACTACTAGTGTTAGTGGCATTGTCTGTTCTATGGGTTTGGTTTGG
TGCTTCATGAGTTTGAAGACGAAGCATACTAGAAGGGCAAGAAAGGATCAAGGGAAGCAA
GAATACGACGAGTCTATTGACGGCGAGTTCGAGAAAGGGAGGGGCCCAAGAAGATTTCGA
TACGACGAGCTCGTGTCTGCTACGAAGAACTTCGCTTTGGAGAGAAAGCTCGGAGAAGGA
GGCTTCGGAGCCGTTTACAAGGGTTCCCTGAAGGACCCGAACCTCACCGTCGCCATAAAG
CGAGTCGCCAAAGGATCGACGCAGGGGAAGAAGGAGTACATCTCTGAGGTGAAGATCATC
AGCCGGCTGAGGCACAGGAACCTCGTGCAGCTCGTGGGCTGGTGCCATGAGCGTGGGGAG
TTCTTGCTCGTGTACGAGTTCATGCCGAACAGGAGCTTGAACACGCACCTCTACGACAGC
AGCAACCTGCTAGCGTGGCCGCTGCGGTTCAAGATCACCGTCGGCGTCGCGTCTGCACTC
CTGTACCTCCACGAGGAGTGGGAGCAATGCGTCGTGCACCGCGACGTGAAGCCAAGCAAC
GTGATGCTGGACTCATCGTTCAACGCTAAGCTTGGGGACTTCGGGCTGGCACGACTCGTA
GACCACGACCGAGGCTCGCAGACTACGGTGATAGCTGGCACGATGGGGTACCTGGCTCCA
GAGTGCGTCACCACGGGCAAGGCAAGCAAAGAGTCCGACGTGTACAGCCTGGGTGTTCTC
GCACTGGAGGTTGCCTGCGGAAGAAGGCCTGTCGTGCTGAAGGAAGACGACGACAAGATC
AACCTAGTCGAATGGGTGTGGCGTCTCTACGGAAGGAACGAGATCCTTACCGCCGTTGAC
GGGAGGCTCGACGGCGCGCTGGACGAGCGTGAAGCCGTGCGCCTGATGGTTGTGGGGCTC
TGGTGTGCGCACCCAGACTACAGTCTCCGGCCTTGTGTCCGCCAGGTCATAAGCGTGCTC
AAGTTCGAGGCGCCGCTGCCAAGCCTTCCACCGACGATGCCTGTGGCGGTGTACTTCGCG
CCCCCGATCCATCTCTGCAGGTTCTCCTACACCTCCTCTGATGACGGAACGCTGATGAAG
GAGCTGGAAGGGTCCGGCGTCTACGCGAAGACGACGACGACGATCTCATCCAGCGCAACC
AACGCTTCTAGTTCACCTCCCTCTGTTCGTTTACCACAAATGGGTTACTAG

Peptide Sequence

PEP ID

Zm00001d006627_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:212876418:212878508:-1 gene:Zm00001d006627 transcript:Zm00001d006627_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-type lectin-domain containing receptor kinase IX.1
Sequence

MRSRSTTTWFLALLHLIVFCNITGVSSLSFKLNFTESNSNGAATIQLQEDAFYNKAVRLT
KEELDGQIAHSVGRAVLADPVTLWDSSTGELADFTTRFTFMIKARVADGSYGEGLAFFLS
PYPSVVPKNSEDGNLGLFGSSSADQSSETSNQIVAVEFDSHKNPWDPDDNHVGINIHSIV
SVDNVTWRSSIKDGKMANAWVTYQASSRNLSVFLTYKDSPQFSGNSSLSYSVDLRRYLPE
KVAIGFSAATGQLVEAHQILYWEFSCTDVRVVKSKKAKSLLVISLTTSVSGIVCSMGLVW
CFMSLKTKHTRRARKDQGKQEYDESIDGEFEKGRGPRRFRYDELVSATKNFALERKLGEG
GFGAVYKGSLKDPNLTVAIKRVAKGSTQGKKEYISEVKIISRLRHRNLVQLVGWCHERGE
FLLVYEFMPNRSLNTHLYDSSNLLAWPLRFKITVGVASALLYLHEEWEQCVVHRDVKPSN
VMLDSSFNAKLGDFGLARLVDHDRGSQTTVIAGTMGYLAPECVTTGKASKESDVYSLGVL
ALEVACGRRPVVLKEDDDKINLVEWVWRLYGRNEILTAVDGRLDGALDEREAVRLMVVGL
WCAHPDYSLRPCVRQVISVLKFEAPLPSLPPTMPVAVYFAPPIHLCRFSYTSSDDGTLMK
ELEGSGVYAKTTTTISSSATNASSSPPSVRLPQMGY

Transcript Sequence

Transcript ID

Zm00001d006627_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:212876418:212878508:-1 gene:Zm00001d006627 gene_biotype:protein_coding transcript_biotype:protein_coding description:L-type lectin-domain containing receptor kinase IX.1
Sequence

ATGAGATCAAGGAGCACAACTACTTGGTTTTTGGCTCTCCTCCACTTAATCGTGTTTTGC
AATATCACCGGTGTCAGTTCTCTGTCCTTCAAGCTGAACTTCACTGAGTCAAACAGCAAC
GGAGCAGCCACGATCCAGTTACAGGAGGATGCCTTCTACAACAAGGCGGTCAGGCTTACC
AAGGAAGAGCTGGACGGGCAGATCGCTCACAGTGTGGGCCGAGCAGTCTTGGCAGATCCG
GTGACCCTCTGGGATAGCAGCACTGGTGAGTTAGCTGACTTCACAACCCGCTTCACATTC
ATGATAAAGGCCCGTGTTGCAGATGGCTCGTACGGCGAGGGCCTCGCCTTCTTCCTCTCA
CCGTACCCTTCAGTTGTCCCCAAAAATTCCGAGGATGGTAACCTTGGCCTCTTCGGTAGT
AGCAGCGCCGATCAGAGTAGTGAGACATCCAACCAGATCGTGGCCGTCGAGTTTGACAGC
CACAAGAACCCATGGGATCCGGACGACAACCACGTAGGCATCAACATCCATTCCATCGTG
TCCGTGGATAACGTCACATGGAGAAGCAGCATCAAGGATGGGAAGATGGCCAACGCATGG
GTGACTTACCAGGCCAGCTCCAGGAACCTGAGCGTCTTCCTGACGTACAAGGACAGCCCA
CAGTTCAGCGGCAACTCCTCCCTATCTTATTCAGTTGATCTCAGAAGGTACCTCCCGGAA
AAAGTGGCCATCGGCTTCTCAGCTGCCACTGGCCAGCTGGTAGAGGCCCATCAGATACTT
TACTGGGAGTTCAGTTGCACGGATGTGCGGGTGGTGAAGAGCAAGAAGGCGAAAAGTTTA
TTAGTCATAAGCTTGACTACTAGTGTTAGTGGCATTGTCTGTTCTATGGGTTTGGTTTGG
TGCTTCATGAGTTTGAAGACGAAGCATACTAGAAGGGCAAGAAAGGATCAAGGGAAGCAA
GAATACGACGAGTCTATTGACGGCGAGTTCGAGAAAGGGAGGGGCCCAAGAAGATTTCGA
TACGACGAGCTCGTGTCTGCTACGAAGAACTTCGCTTTGGAGAGAAAGCTCGGAGAAGGA
GGCTTCGGAGCCGTTTACAAGGGTTCCCTGAAGGACCCGAACCTCACCGTCGCCATAAAG
CGAGTCGCCAAAGGATCGACGCAGGGGAAGAAGGAGTACATCTCTGAGGTGAAGATCATC
AGCCGGCTGAGGCACAGGAACCTCGTGCAGCTCGTGGGCTGGTGCCATGAGCGTGGGGAG
TTCTTGCTCGTGTACGAGTTCATGCCGAACAGGAGCTTGAACACGCACCTCTACGACAGC
AGCAACCTGCTAGCGTGGCCGCTGCGGTTCAAGATCACCGTCGGCGTCGCGTCTGCACTC
CTGTACCTCCACGAGGAGTGGGAGCAATGCGTCGTGCACCGCGACGTGAAGCCAAGCAAC
GTGATGCTGGACTCATCGTTCAACGCTAAGCTTGGGGACTTCGGGCTGGCACGACTCGTA
GACCACGACCGAGGCTCGCAGACTACGGTGATAGCTGGCACGATGGGGTACCTGGCTCCA
GAGTGCGTCACCACGGGCAAGGCAAGCAAAGAGTCCGACGTGTACAGCCTGGGTGTTCTC
GCACTGGAGGTTGCCTGCGGAAGAAGGCCTGTCGTGCTGAAGGAAGACGACGACAAGATC
AACCTAGTCGAATGGGTGTGGCGTCTCTACGGAAGGAACGAGATCCTTACCGCCGTTGAC
GGGAGGCTCGACGGCGCGCTGGACGAGCGTGAAGCCGTGCGCCTGATGGTTGTGGGGCTC
TGGTGTGCGCACCCAGACTACAGTCTCCGGCCTTGTGTCCGCCAGGTCATAAGCGTGCTC
AAGTTCGAGGCGCCGCTGCCAAGCCTTCCACCGACGATGCCTGTGGCGGTGTACTTCGCG
CCCCCGATCCATCTCTGCAGGTTCTCCTACACCTCCTCTGATGACGGAACGCTGATGAAG
GAGCTGGAAGGGTCCGGCGTCTACGCGAAGACGACGACGACGATCTCATCCAGCGCAACC
AACGCTTCTAGTTCACCTCCCTCTGTTCGTTTACCACAAATGGGTTACTAG