Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006619_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:212747709:212749721:1 gene:Zm00001d006619 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 315 description:Zinc finger CCCH domain-containing protein 56
Sequence	ATGGTCGATCTTGCTGATCTCGAGGGTGCGGGCGAGGCGGCGCGCTCGCATCCCGCCGCT TCCGGCCAGCGGGACAGGCTGGCGGCGCTGCTGGAGCTCGCTGCGGCGGACGACGCCGCG GGGTTCCGCGAGGCGCTCGCGGGAGGAGGCGGCCAGGGCGACGCAGCGGAGCTGGCGGAC GGGGTCGGGCTGTGGTACGGCCGAAGCAAGGCGTACGAGCCGCGCACGCCGCTGATGGTT GCGGCGACGTACGGCAGCGTCGAAGTGGTGTCGTTGCTGCTCGGCCTCGGATGCGTCGAC GTCAACCGGCGCCCCGGCGTCGACGGCGCCACCCCGCTGCACTGCGCCGCTTCCGGCGGC TCGCGAAACGCCGTGGCCGTGGTCAAGCTGCTCCTGGCTGCCGGTGCCTGCCCGGTAACC CCCGACTCCGCCGGTCGCTTGCCTGCCGACGTCATCTTGCCTCCTGCTTCGCCCGACGCC TTGGGCGATCTGGATATGCTCCTTGGCCGCCGCCGAGGGCTCGCTGTCGCGACCTCGGTA CCATCGCTCTCGTCGTCCCCGCCGCTCTCGACCTCGCCGGATGAAGGTAACAGGTCGCCA TCCTCGCGGTCGTCTTCGTTGTCACCGATTACCGTGGACCGCGCCAAGAAGGAGTACCCG GTGGATCCGACGCTGCCCGACATCAAAAGCAGCGTGTATGCCTCGGACGAATTCCGCATG TTCGCGTTCAAGGTGCGGCCGTGCTCTAGGGCCTACTCGCATGACTGGACAGAGTGTCCG TTCGTGCACCCTGGTGAGAACGCCCGCCGCAGGGACCCCCGCAAGCACCCATACACGGCT GTACCCTGCCCCAACTTCCGCCGCCCTGGAGGTTGTCCCAGTGGTGATAGCTGCGAGTTC TCCCATGGTGTTTTCGAGAGCTGGCTCCACCCATCGCAGTACCGCACAAGGCCCTGCAAG GAGGGCGCAGCTTGTGCCCGCCGCATCTGCTTCTTCGCCCATGATGAAGATGAGCTCCGC CATGTGCCTCACAATAGTGGTGCAGGCCTGCTGTCTCCCCGAGCCTCTTCATCCATTGAC ATGACCGCTGCTGCTGCTGCTCTTGGGCTTCTACCTGGATCTCCTACCAGACACTTTGTG CCACCACCTCTGTCACCATCTGCCGCCAACAATGGTGGAGGTGCTGCTGCTCATTGGCTT CAAGGTAGCAGGCTACGATCTTCTTTCAATGCAAGGGATGCACAGGTTGATGACCTTGGC GTGCTCCTGGAATGGGAATCACAATACCTTGGAGCTCTCAGCCTCCCACAAAGCAGCCGA TCCCAGCTGAGTATTCGTCCAACCGCAATTGCTCCATCCAATCTTGAAGAGATGTATGCT TCAGACATGGCTATGTCGCCAAGATTCTCCAATGATCAAGTTCACTCAGTCTACTCACCA GCACACAAATCTGCACTTCTAAACAAGTTTCATCATCAGCAAAAGGGCCTTCTGTCGCCT GTCAATACTAACAGGATATACTCGCCTAGGGGTCTTGATCCATCAGTTCTCCATTCTCCA TTTGGTGGTATGTGTCCTCGGTCCCCTCGGACTATGGAGCCAGCATCTCCCTTAACTGTC TGTGTCGGGGCTACTGCTACACAGCGTGATATGTTGGATCAGTTCTCTTCCCTGAACAAG CATCAGGTGCCATCTGCGGGATCGCCACGGAATCTTAATGTCTCATGGGGCAACATTGGT ACCCCAAAAAGTAAGGTGGATTGGGGTGTTGACAAAGATGAACTAGTCCGCTTGAGGCAC CCTGTGCAACCTGGAAATACAGAAGAGGAGCCAGATGTGTCTTGGGTGCAGTCAATGGTG AACCATGCTGAGCTGAGTGGCAAGAGGGGTGAAATGGCAGGCATGGCTTCTCGACCAACT AATAGGCCTGAACTGAGCAGTCAGGATGACTCACTGGATGAGAGTGTTATTGCTTCTTGG CTTGAGCAGCAGATGCACTTGGAGCCGAAGTAA

Peptide Sequence

PEP ID	Zm00001d006619_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:212747709:212749721:1 gene:Zm00001d006619 transcript:Zm00001d006619_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 315 description:Zinc finger CCCH domain-containing protein 56
Sequence	MVDLADLEGAGEAARSHPAASGQRDRLAALLELAAADDAAGFREALAGGGGQGDAAELAD GVGLWYGRSKAYEPRTPLMVAATYGSVEVVSLLLGLGCVDVNRRPGVDGATPLHCAASGG SRNAVAVVKLLLAAGACPVTPDSAGRLPADVILPPASPDALGDLDMLLGRRRGLAVATSV PSLSSSPPLSTSPDEGNRSPSSRSSSLSPITVDRAKKEYPVDPTLPDIKSSVYASDEFRM FAFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKHPYTAVPCPNFRRPGGCPSGDSCEF SHGVFESWLHPSQYRTRPCKEGAACARRICFFAHDEDELRHVPHNSGAGLLSPRASSSID MTAAAAALGLLPGSPTRHFVPPPLSPSAANNGGGAAAHWLQGSRLRSSFNARDAQVDDLG VLLEWESQYLGALSLPQSSRSQLSIRPTAIAPSNLEEMYASDMAMSPRFSNDQVHSVYSP AHKSALLNKFHHQQKGLLSPVNTNRIYSPRGLDPSVLHSPFGGMCPRSPRTMEPASPLTV CVGATATQRDMLDQFSSLNKHQVPSAGSPRNLNVSWGNIGTPKSKVDWGVDKDELVRLRH PVQPGNTEEEPDVSWVQSMVNHAELSGKRGEMAGMASRPTNRPELSSQDDSLDESVIASW LEQQMHLEPK

Transcript Sequence

Transcript ID	Zm00001d006619_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:212747709:212749721:1 gene:Zm00001d006619 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C3H-transcription factor 315 description:Zinc finger CCCH domain-containing protein 56
Sequence	ATGGTCGATCTTGCTGATCTCGAGGGTGCGGGCGAGGCGGCGCGCTCGCATCCCGCCGCT TCCGGCCAGCGGGACAGGCTGGCGGCGCTGCTGGAGCTCGCTGCGGCGGACGACGCCGCG GGGTTCCGCGAGGCGCTCGCGGGAGGAGGCGGCCAGGGCGACGCAGCGGAGCTGGCGGAC GGGGTCGGGCTGTGGTACGGCCGAAGCAAGGCGTACGAGCCGCGCACGCCGCTGATGGTT GCGGCGACGTACGGCAGCGTCGAAGTGGTGTCGTTGCTGCTCGGCCTCGGATGCGTCGAC GTCAACCGGCGCCCCGGCGTCGACGGCGCCACCCCGCTGCACTGCGCCGCTTCCGGCGGC TCGCGAAACGCCGTGGCCGTGGTCAAGCTGCTCCTGGCTGCCGGTGCCTGCCCGGTAACC CCCGACTCCGCCGGTCGCTTGCCTGCCGACGTCATCTTGCCTCCTGCTTCGCCCGACGCC TTGGGCGATCTGGATATGCTCCTTGGCCGCCGCCGAGGGCTCGCTGTCGCGACCTCGGTA CCATCGCTCTCGTCGTCCCCGCCGCTCTCGACCTCGCCGGATGAAGGTAACAGGTCGCCA TCCTCGCGGTCGTCTTCGTTGTCACCGATTACCGTGGACCGCGCCAAGAAGGAGTACCCG GTGGATCCGACGCTGCCCGACATCAAAAGCAGCGTGTATGCCTCGGACGAATTCCGCATG TTCGCGTTCAAGGTGCGGCCGTGCTCTAGGGCCTACTCGCATGACTGGACAGAGTGTCCG TTCGTGCACCCTGGTGAGAACGCCCGCCGCAGGGACCCCCGCAAGCACCCATACACGGCT GTACCCTGCCCCAACTTCCGCCGCCCTGGAGGTTGTCCCAGTGGTGATAGCTGCGAGTTC TCCCATGGTGTTTTCGAGAGCTGGCTCCACCCATCGCAGTACCGCACAAGGCCCTGCAAG GAGGGCGCAGCTTGTGCCCGCCGCATCTGCTTCTTCGCCCATGATGAAGATGAGCTCCGC CATGTGCCTCACAATAGTGGTGCAGGCCTGCTGTCTCCCCGAGCCTCTTCATCCATTGAC ATGACCGCTGCTGCTGCTGCTCTTGGGCTTCTACCTGGATCTCCTACCAGACACTTTGTG CCACCACCTCTGTCACCATCTGCCGCCAACAATGGTGGAGGTGCTGCTGCTCATTGGCTT CAAGGTAGCAGGCTACGATCTTCTTTCAATGCAAGGGATGCACAGGTTGATGACCTTGGC GTGCTCCTGGAATGGGAATCACAATACCTTGGAGCTCTCAGCCTCCCACAAAGCAGCCGA TCCCAGCTGAGTATTCGTCCAACCGCAATTGCTCCATCCAATCTTGAAGAGATGTATGCT TCAGACATGGCTATGTCGCCAAGATTCTCCAATGATCAAGTTCACTCAGTCTACTCACCA GCACACAAATCTGCACTTCTAAACAAGTTTCATCATCAGCAAAAGGGCCTTCTGTCGCCT GTCAATACTAACAGGATATACTCGCCTAGGGGTCTTGATCCATCAGTTCTCCATTCTCCA TTTGGTGGTATGTGTCCTCGGTCCCCTCGGACTATGGAGCCAGCATCTCCCTTAACTGTC TGTGTCGGGGCTACTGCTACACAGCGTGATATGTTGGATCAGTTCTCTTCCCTGAACAAG CATCAGGTGCCATCTGCGGGATCGCCACGGAATCTTAATGTCTCATGGGGCAACATTGGT ACCCCAAAAAGTAAGGTGGATTGGGGTGTTGACAAAGATGAACTAGTCCGCTTGAGGCAC CCTGTGCAACCTGGAAATACAGAAGAGGAGCCAGATGTGTCTTGGGTGCAGTCAATGGTG AACCATGCTGAGCTGAGTGGCAAGAGGGGTGAAATGGCAGGCATGGCTTCTCGACCAACT AATAGGCCTGAACTGAGCAGTCAGGATGACTCACTGGATGAGAGTGTTATTGCTTCTTGG CTTGAGCAGCAGATGCACTTGGAGCCGAAGTAA