Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006607_T248
CDS Infomation	cds chromosome:B73_RefGen_v4:2:212383470:212389275:1 gene:Zm00001d006607 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	ATGTTGAATACTGATGCACATAATCCAATGGTGTGGCCTAAGATGTCAAAATCAGATTTT GTTCGTATGAACACTGCAAGTGATGCAGAAGAATGTGTCCCAAATGAGCTCTTGGAAGAA ATTTATGATTCCATTGTCAAGGAAGAGATAAAGATGAAAGACGATTCTCATGATACTTCA AAATCCACCAAGAGACCTGAAACAGAAGAAAGAGGCCGTCTTGTCAATATTCTCAATTTA GCCCTTCCAAGACTGAAGTCAGCTAGTGATACAAAGGCAGAGAGTGAAAAGATCATCAAA CAGACCCAGGCACTTTTCAAGAACCAGGGACAGAAGAAAGGTGTTTTTCATGTTGCGCAG CAGGTTGAGCTTGTTAGACCAATGCTTGAAGCTGTAGGATGGCCTTTGCTTGCAACATTT TCTGTGACCATGGAGGAAGGTGACAGTAAGCCTAGGGTTGTATCATGCATGGAAGGATTT CGTGCTGGTATCCATCTTACTCGTGTTCTTGGAATGGACACCATGCGCTATGCTTTCTTG ACGTCCTTAGTGCGGTTTACATTTTTGCACGCTCCCAAGGAGATGCGCAGTAAAAATGTT GAGGCACTGAGGACTCTTCTTGGTTTAGCTGACACTGATATGGATGCTTTACAAGATACT TGGAATGCTGTTTTAGAATGTGTCTCAAGACTCGAGTATATCACTTCGAACCCTTCAATT TCTGCAACTGTAATGCTGGGATCAAATCAAATATCGAGGGATTCTGTAGTCCAATCGCTG AAAGAGTTGGCTGGAAAGCCTGCTGAACAAATCTTTGTAAACAGTGTAAAACTGCCAAGT GATTCAATTGTTGAATTCTTCACCGCCCTATGTGGTGTTTCTGCTGAAGAACTAAAACAA ACACCTGCTCGTGTCTTTAGCTTGCAGAAGCTTGTAGAGATAAGCTATTATAACATGGCT CGCATTCGGCTGGTGTGGGCTAGAATATGGTCTGTGTTGGCCCAGCACTTTATTGCTGCT GGAAGCCACAATGAGGAGAAAGTTGCAATGTATGCCATTGATTCACTAAGACAGCTTGGT ATGAAGTACTTGGAGCGTGCTGAATTAAACAATTTCACATTTCAGAGTGACATACTGAAA CCTTTTGTCATTTTAATGAGGAATACCCACAACTCAAAAATCCGAGGTTTAATTGTTGAT TGCATTGTTCAGTTGATCAAGTCAAAAGTTGGTAGCATAAAGTCAGGGTGGCGTTGCGTA TTCATGATATTTACTGCAGCAGCTGATGATGAGGATGAATCAATTGTTGAGAGTGCTTTT GAAAATGTAGAACAAGTTATCTTGGAACATTTTGACCAAGTTGTTGGTGATTGCTTCATG GATTGCGTCAACTGTCTTATTGGTTTTGCAAATAACAAGTGCACTCCTCGGATTAGTTTG AAGGCTATTGCTCTCCTGCGTATATGTGAAGATCGTTTGGCAGAGGGATTCATTCCAGGC GGCGCTATTAAACCTATTGATGTTGTTCCAGAGGCCAATTTTGATGTGACTGAGCATTAT TGGTTTCCTATGCTAGCTGGTTTGTCTGATTTGACTTTAGACTCCAGACCAGAAGTCAGA CACTGTGCACTGGAAGTGTTGTTTGATTTGTTGAATGAAAGAGGACATAAGTTCTCTTCT CCCTTCTGGGAGAGTATTTTTCATCGTGTACTATTTCCAATTTTTGATCATGTAAGGCAT GCTGGAAGGGATGGGCTTTCTTCTTCTGGGGATGATTGGCTTCGTGATACTAGCATTCAT TCGCTGCAGTTAATCTGCAACCTTTTCAATACATTCTATAAGGAGGTATCCTTTATGCTT CCACCTCTTCTCAGTTTGCTGCTTGAATGTGCGAAAAAAACAGACCAAACTGTCGTTTCA ATTTCTCTTGGCGCTTTAGTTCATCTGATTGAAGTTGGTGGTCACCAGTTCAGTGATGGT GATTGGGAAACATTATTAAAGAGTATTAGGGATGCGTCATACACAACTCAGCCTCTTGAA CTGCTCAATTCATTAGGATTCCATAAATCAAACAACCAGCAGTTACTTTCAAGAGAAGAA AGCAATGCACATGGCAATAGTTACCATGGCAGCCGGGGGGAACCCTCCATCGTTAATAAT GGTGAGCATAGTCATGCAGAGGCAGGTCCACAAACTAGCCTGGAGAATTCGGAAGGTTTA CCGTCACCATCAGGGAGAACACAACCTGCTGTTTCCCCACGTGGCCAAAGCTTTGGACAA AGAATTATGGGCAATATGATGGATAATCTTTTGGTTAGAAGTCTTACATCCAAATCAAAA GGTCGAGTCGATGATATTGCTCCACCCTCACCTGTGAAGGCCCCTGATGATGATGAGACA GACAAGGCTGAAGGGGAAGAGAGCCCTATGATGGAAACTGTCCGGAGCAAATGTATCACA CAGTTGCTGCTGCTCGGGGCAATTGACAGCATACAGAAGAGGTATTGGAGCAGGTTAAAA GCTACACAACAGATAGCAATAATGGATATCTTGCTCTCACTGCTAGAATTTGCTTCTTCG TATAACTCACCTTCAAATTTTCGGACGAGAATGCACCATATACCTCTAGAAAGACCTCCA CTGAATCTTCTCCGTCAAGAACTAGTTGGAACAACAATTTATTTAGATATCCTTCATAAG TCAACAGTGGAGCAGGACAAAATTGACTCCATTGAGGAAACAAATGGTTTAAATGTGGAA TCTGGTGACCAGGAAAAGATCAAGTACCTAGCAGAAGGGAAGCTGGTTTCTTTTTGTGGG CAGATTTTGAAAGAGGCGTCTGTTCTCCAGCCTAGCACTGGGGAGGCTGCCAGTGCAGAC ATACATCGTGTATTAGACTTACGGGCACCTGTTATTGTAAAGGTTTTGAAAGGAATGTGC ATCATGGATGCTCAGATCTTCAGAAGGCACCTGAAAGAGTTCTATCCATTAATTACCAAA CTTATCTGTTGTGATCAGATGGATGTTCGTGGAGCCCTTGGTGATCTCTTTAGCAAACAG CTTACTCCACTCATGCCCTGA

Peptide Sequence

PEP ID	Zm00001d006607_P248
PEP Infomation	pep chromosome:B73_RefGen_v4:2:212383470:212389275:1 gene:Zm00001d006607 transcript:Zm00001d006607_T248 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	MLNTDAHNPMVWPKMSKSDFVRMNTASDAEECVPNELLEEIYDSIVKEEIKMKDDSHDTS KSTKRPETEERGRLVNILNLALPRLKSASDTKAESEKIIKQTQALFKNQGQKKGVFHVAQ QVELVRPMLEAVGWPLLATFSVTMEEGDSKPRVVSCMEGFRAGIHLTRVLGMDTMRYAFL TSLVRFTFLHAPKEMRSKNVEALRTLLGLADTDMDALQDTWNAVLECVSRLEYITSNPSI SATVMLGSNQISRDSVVQSLKELAGKPAEQIFVNSVKLPSDSIVEFFTALCGVSAEELKQ TPARVFSLQKLVEISYYNMARIRLVWARIWSVLAQHFIAAGSHNEEKVAMYAIDSLRQLG MKYLERAELNNFTFQSDILKPFVILMRNTHNSKIRGLIVDCIVQLIKSKVGSIKSGWRCV FMIFTAAADDEDESIVESAFENVEQVILEHFDQVVGDCFMDCVNCLIGFANNKCTPRISL KAIALLRICEDRLAEGFIPGGAIKPIDVVPEANFDVTEHYWFPMLAGLSDLTLDSRPEVR HCALEVLFDLLNERGHKFSSPFWESIFHRVLFPIFDHVRHAGRDGLSSSGDDWLRDTSIH SLQLICNLFNTFYKEVSFMLPPLLSLLLECAKKTDQTVVSISLGALVHLIEVGGHQFSDG DWETLLKSIRDASYTTQPLELLNSLGFHKSNNQQLLSREESNAHGNSYHGSRGEPSIVNN GEHSHAEAGPQTSLENSEGLPSPSGRTQPAVSPRGQSFGQRIMGNMMDNLLVRSLTSKSK GRVDDIAPPSPVKAPDDDETDKAEGEESPMMETVRSKCITQLLLLGAIDSIQKRYWSRLK ATQQIAIMDILLSLLEFASSYNSPSNFRTRMHHIPLERPPLNLLRQELVGTTIYLDILHK STVEQDKIDSIEETNGLNVESGDQEKIKYLAEGKLVSFCGQILKEASVLQPSTGEAASAD IHRVLDLRAPVIVKVLKGMCIMDAQIFRRHLKEFYPLITKLICCDQMDVRGALGDLFSKQ LTPLMP

Transcript Sequence

Transcript ID	Zm00001d006607_T248
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:212383470:212389275:1 gene:Zm00001d006607 gene_biotype:protein_coding transcript_biotype:protein_coding description:HOPM interactor 7
Sequence	GGTACTGTGCTGATAATCCTGAGCTTTTCAAAAATGCAGATACTGCTTATGTTCTTGCTT ATGCTGTTATAATGTTGAATACTGATGCACATAATCCAATGGTGTGGCCTAAGATGTCAA AATCAGATTTTGTTCGTATGAACACTGCAAGTGATGCAGAAGAATGTGTCCCAAATGAGC TCTTGGAAGAAATTTATGATTCCATTGTCAAGGAAGAGATAAAGATGAAAGACGATTCTC ATGATACTTCAAAATCCACCAAGAGACCTGAAACAGAAGAAAGAGGCCGTCTTGTCAATA TTCTCAATTTAGCCCTTCCAAGACTGAAGTCAGCTAGTGATACAAAGGCAGAGAGTGAAA AGATCATCAAACAGACCCAGGCACTTTTCAAGAACCAGGGACAGAAGAAAGGTGTTTTTC ATGTTGCGCAGCAGGTTGAGCTTGTTAGACCAATGCTTGAAGCTGTAGGATGGCCTTTGC TTGCAACATTTTCTGTGACCATGGAGGAAGGTGACAGTAAGCCTAGGGTTGTATCATGCA TGGAAGGATTTCGTGCTGGTATCCATCTTACTCGTGTTCTTGGAATGGACACCATGCGCT ATGCTTTCTTGACGTCCTTAGTGCGGTTTACATTTTTGCACGCTCCCAAGGAGATGCGCA GTAAAAATGTTGAGGCACTGAGGACTCTTCTTGGTTTAGCTGACACTGATATGGATGCTT TACAAGATACTTGGAATGCTGTTTTAGAATGTGTCTCAAGACTCGAGTATATCACTTCGA ACCCTTCAATTTCTGCAACTGTAATGCTGGGATCAAATCAAATATCGAGGGATTCTGTAG TCCAATCGCTGAAAGAGTTGGCTGGAAAGCCTGCTGAACAAATCTTTGTAAACAGTGTAA AACTGCCAAGTGATTCAATTGTTGAATTCTTCACCGCCCTATGTGGTGTTTCTGCTGAAG AACTAAAACAAACACCTGCTCGTGTCTTTAGCTTGCAGAAGCTTGTAGAGATAAGCTATT ATAACATGGCTCGCATTCGGCTGGTGTGGGCTAGAATATGGTCTGTGTTGGCCCAGCACT TTATTGCTGCTGGAAGCCACAATGAGGAGAAAGTTGCAATGTATGCCATTGATTCACTAA GACAGCTTGGTATGAAGTACTTGGAGCGTGCTGAATTAAACAATTTCACATTTCAGAGTG ACATACTGAAACCTTTTGTCATTTTAATGAGGAATACCCACAACTCAAAAATCCGAGGTT TAATTGTTGATTGCATTGTTCAGTTGATCAAGTCAAAAGTTGGTAGCATAAAGTCAGGGT GGCGTTGCGTATTCATGATATTTACTGCAGCAGCTGATGATGAGGATGAATCAATTGTTG AGAGTGCTTTTGAAAATGTAGAACAAGTTATCTTGGAACATTTTGACCAAGTTGTTGGTG ATTGCTTCATGGATTGCGTCAACTGTCTTATTGGTTTTGCAAATAACAAGTGCACTCCTC GGATTAGTTTGAAGGCTATTGCTCTCCTGCGTATATGTGAAGATCGTTTGGCAGAGGGAT TCATTCCAGGCGGCGCTATTAAACCTATTGATGTTGTTCCAGAGGCCAATTTTGATGTGA CTGAGCATTATTGGTTTCCTATGCTAGCTGGTTTGTCTGATTTGACTTTAGACTCCAGAC CAGAAGTCAGACACTGTGCACTGGAAGTGTTGTTTGATTTGTTGAATGAAAGAGGACATA AGTTCTCTTCTCCCTTCTGGGAGAGTATTTTTCATCGTGTACTATTTCCAATTTTTGATC ATGTAAGGCATGCTGGAAGGGATGGGCTTTCTTCTTCTGGGGATGATTGGCTTCGTGATA CTAGCATTCATTCGCTGCAGTTAATCTGCAACCTTTTCAATACATTCTATAAGGAGGTAT CCTTTATGCTTCCACCTCTTCTCAGTTTGCTGCTTGAATGTGCGAAAAAAACAGACCAAA CTGTCGTTTCAATTTCTCTTGGCGCTTTAGTTCATCTGATTGAAGTTGGTGGTCACCAGT TCAGTGATGGTGATTGGGAAACATTATTAAAGAGTATTAGGGATGCGTCATACACAACTC AGCCTCTTGAACTGCTCAATTCATTAGGATTCCATAAATCAAACAACCAGCAGTTACTTT CAAGAGAAGAAAGCAATGCACATGGCAATAGTTACCATGGCAGCCGGGGGGAACCCTCCA TCGTTAATAATGGTGAGCATAGTCATGCAGAGGCAGGTCCACAAACTAGCCTGGAGAATT CGGAAGGTTTACCGTCACCATCAGGGAGAACACAACCTGCTGTTTCCCCACGTGGCCAAA GCTTTGGACAAAGAATTATGGGCAATATGATGGATAATCTTTTGGTTAGAAGTCTTACAT CCAAATCAAAAGGTCGAGTCGATGATATTGCTCCACCCTCACCTGTGAAGGCCCCTGATG ATGATGAGACAGACAAGGCTGAAGGGGAAGAGAGCCCTATGATGGAAACTGTCCGGAGCA AATGTATCACACAGTTGCTGCTGCTCGGGGCAATTGACAGCATACAGAAGAGGTATTGGA GCAGGTTAAAAGCTACACAACAGATAGCAATAATGGATATCTTGCTCTCACTGCTAGAAT TTGCTTCTTCGTATAACTCACCTTCAAATTTTCGGACGAGAATGCACCATATACCTCTAG AAAGACCTCCACTGAATCTTCTCCGTCAAGAACTAGTTGGAACAACAATTTATTTAGATA TCCTTCATAAGTCAACAGTGGAGCAGGACAAAATTGACTCCATTGAGGAAACAAATGGTT TAAATGTGGAATCTGGTGACCAGGAAAAGATCAAGTACCTAGCAGAAGGGAAGCTGGTTT CTTTTTGTGGGCAGATTTTGAAAGAGGCGTCTGTTCTCCAGCCTAGCACTGGGGAGGCTG CCAGTGCAGACATACATCGTGTATTAGACTTACGGGCACCTGTTATTGTAAAGGTTTTGA AAGGAATGTGCATCATGGATGCTCAGATCTTCAGAAGGCACCTGAAAGAGTTCTATCCAT TAATTACCAAACTTATCTGTTGTGATCAGATGGATGTTCGTGGAGCCCTTGGTGATCTCT TTAGCAAACAGCTTACTCCACTCATGCCCTGAAGTCTGGCAGTATTTCCTCCCTTGCATA GATCTTGTTGGAACATATTCTTCGTCAGCATTTTTGTGCAAACATGGAGCACCGGCTTGT ACTTTGGAGCTATTTATCTGTGCCCGGACAGGGATGATGCTTCCATTATACAGTAGAGTA GTGTTGGTAATATGTACACATTGTTGAGAACGTTGTACTTGAGGCCTGTTGTTATTATAC GGCAATAGTAGATTGTTTGCGGCAAGCCTCGTTTTTTGTGCGTCTAATTCTCTGACTTGC AGAATTGCGGTGGCAAATACCCATTGCCCTCCAAGTTGTGCGTTAGCGTATTTATCCGTA GTTGACAGCAATGAACATATTACTACTGCTTTCTGTATTTTC