Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006595_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:211790818:211794614:1 gene:Zm00001d006595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine kinase 1
Sequence	ATGCAAGAAACCAAGCATCGCCTTCATGCTCAAGAGATTGCACATTCACTTGATCTTAGG AAGTATGACGGCATCATTTGTGTCAGTGGAGATGGTGTGATGGTAGAGGTTGTCAATGGT CTCCTGCAAAGGGAGGATTGGGAAACAGCAATAAAAGTGCCCCTTGGGATCATTCCAGCA GGTACTGGAAATGGAATGGCACGATCTCTACTGCATGCTGCTGGTGAACCATTCTGTATA TCTAATGCTGTGTTCGCAATCATCAGAGGTCATAAACGTGCCCTTGATGTTACTTCTGTT GTGCAGGGAAAGGCAAGGTTCTTTAGTGTCCTGATGCTTACATGGGGTCTGGTGGCTGAT GTTGATATTGAATCTGAGAAGTATAGGTGGATGGGAAGTGCTCGCCTTGATTTTTATCTT CTACTCCGCATTCTGAACCTGCGACGGTACAATGGGCGTATCCTTTTTGTTCCAGCACCA GGATACGAAGAAGTTGGTGATCCAGTGGACCAAACTACCGGTTACGAAACAAACGGGTTT AGCACGGGATTTCAAGACGACGGAAGAACCGGCAGTAATGGCCCGTCGTCGATCAAAGAA GCTGGTCTTAGATGGAGATCACTGGATGGGCCATTCGTTTCAGTCTGGCTCGGCAATGTT CCTTTCGCTAGCGAAGATGCCATGGCAGCACCAAAAGCTGAGTTTGCGGATGGCTACTTG GATGCTGCTATAATCAAGGATTGTCCTCGGTGGGATGTCCTCGGGCTCGTGTTCCAGATG AAGGACGGCAGCTACGTGAACTCGCCATGCGTGGAGTACTTCAAGGTGAAGGCGATCCGG ATCGAGCCGGGCCTGCGCGTGGGCAGCAGCACCGAGGGCGGTATCATCGACTCGGACGGG GAGGTGATCGCGAGGGGCGACGAGTCCGATTCCCGCGCCGGCGACGACGAGCCGGGGCAC CTGATGGCGTACGGCCCGCCCATCCAGCTGACGGTGGACCAGGGGCTGGCCACCATCTTC TCCCCGAGATGA

Peptide Sequence

PEP ID	Zm00001d006595_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:211790818:211794614:1 gene:Zm00001d006595 transcript:Zm00001d006595_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine kinase 1
Sequence	MQETKHRLHAQEIAHSLDLRKYDGIICVSGDGVMVEVVNGLLQREDWETAIKVPLGIIPA GTGNGMARSLLHAAGEPFCISNAVFAIIRGHKRALDVTSVVQGKARFFSVLMLTWGLVAD VDIESEKYRWMGSARLDFYLLLRILNLRRYNGRILFVPAPGYEEVGDPVDQTTGYETNGF STGFQDDGRTGSNGPSSIKEAGLRWRSLDGPFVSVWLGNVPFASEDAMAAPKAEFADGYL DAAIIKDCPRWDVLGLVFQMKDGSYVNSPCVEYFKVKAIRIEPGLRVGSSTEGGIIDSDG EVIARGDESDSRAGDDEPGHLMAYGPPIQLTVDQGLATIFSPR

Transcript Sequence

Transcript ID	Zm00001d006595_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:211790818:211794614:1 gene:Zm00001d006595 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphingosine kinase 1
Sequence	TATAATTGTTCTAGCCTCCTAGGCGTGCGCAGATCTTTCTTATGCGTGAAACCGTGCGTT TGAATAGCTGTTCTTCTGGGCATGATCTGGTCATAGCGTCAAATGTACAGATGTAGCAGC ATGCAAGGTGCCAACTAGTTGAGTGCTACAGAGTTTGAAATTCTCCATGGATTCTTCTAC AGTACCTGGTCCACTCAATTTCCACGGTTGACTTCAAATTGGCATGTCGATGATGGTGCA TACCGCACATAGCTTGCGTTTAAATAATTATCACCCTGAGCAAGACAGAATCATGTATGT CTGTCTAAACGATGCCTGTTCATTTGGCACAATGCAGCAGTGATACTTGGCAGTAGTAAT GTTATACATATCTTTTACAGCCTTTTATTGTTGTTTTGTGAGATTTGGTTGAATTTTCCT CTCATTGTCACCCATTTTCATATTAACATCACCCTTGAATGTTGCATTAGCTATCATACT CGTAGGATGCAAGTAGGTAATCAACGGTGTTTTGTGTGTCAACTAACTTAGTTCATTTCT CCCCTTAAATTAATTACATGACATGCCATTTTACTTCATTTTATCAAGTTCTGGGTCAAT CCAATGACTCAGAACATGACATACTTGCATCCCTATAGCTATCAATGCAAAATGTCGGAG CTGACTTTTTTTTGTTCAGTTCATTATTGATGGTGTTGATCCAGTGCTCTTTTCTCCTGC ATATTTCTGTTCCATTTCTGGTTGGTTCAGGCTTCTATAACTCCTTCAGAAAAGCATAGT AGATTAACAACTGTATTAGAACACTAGTTTTACCAACTCATGGTCCCTTTGTTATTCCTC CTGCAATATTGCCACAGGCCGGCCAAAGAAATTGTTCATTATAGTGAACCCTTATGGTGG AAAGAGAAGTGGACCGAGTATTTTCCAGAATGAAGTCCTCCCCCTCATTGAAGCTTCTGG CGTGCTTTATACGATGCAAGAAACCAAGCATCGCCTTCATGCTCAAGAGATTGCACATTC ACTTGATCTTAGGAAGTATGACGGCATCATTTGTGTCAGTGGAGATGGTGTGATGGTAGA GGTTGTCAATGGTCTCCTGCAAAGGGAGGATTGGGAAACAGCAATAAAAGTGCCCCTTGG GATCATTCCAGCAGGTACTGGAAATGGAATGGCACGATCTCTACTGCATGCTGCTGGTGA ACCATTCTGTATATCTAATGCTGTGTTCGCAATCATCAGAGGTCATAAACGTGCCCTTGA TGTTACTTCTGTTGTGCAGGGAAAGGCAAGGTTCTTTAGTGTCCTGATGCTTACATGGGG TCTGGTGGCTGATGTTGATATTGAATCTGAGAAGTATAGGTGGATGGGAAGTGCTCGCCT TGATTTTTATCTTCTACTCCGCATTCTGAACCTGCGACGGTACAATGGGCGTATCCTTTT TGTTCCAGCACCAGGATACGAAGAAGTTGGTGATCCAGTGGACCAAACTACCGGTTACGA AACAAACGGGTTTAGCACGGGATTTCAAGACGACGGAAGAACCGGCAGTAATGGCCCGTC GTCGATCAAAGAAGCTGGTCTTAGATGGAGATCACTGGATGGGCCATTCGTTTCAGTCTG GCTCGGCAATGTTCCTTTCGCTAGCGAAGATGCCATGGCAGCACCAAAAGCTGAGTTTGC GGATGGCTACTTGGATGCTGCTATAATCAAGGATTGTCCTCGGTGGGATGTCCTCGGGCT CGTGTTCCAGATGAAGGACGGCAGCTACGTGAACTCGCCATGCGTGGAGTACTTCAAGGT GAAGGCGATCCGGATCGAGCCGGGCCTGCGCGTGGGCAGCAGCACCGAGGGCGGTATCAT CGACTCGGACGGGGAGGTGATCGCGAGGGGCGACGAGTCCGATTCCCGCGCCGGCGACGA CGAGCCGGGGCACCTGATGGCGTACGGCCCGCCCATCCAGCTGACGGTGGACCAGGGGCT GGCCACCATCTTCTCCCCGAGATGACGATCCTTCTCTCAGTTCTCCTCCACCGCCTGCGA GTAATTTGCTTCGTCTAGCCCACCCTGCCATTCTCTCGCGTAGGATCATGTGCTTCTGTA TGTAAATATTGCTCACAGCCCACCCCGGCCCAGTTGGATGAGCGATGAGCCAAGAGGGAC GGATACTGGCTGGATCTCCGTCTATAGATTGTTTTATTTATTTCCCTGCCCACCGCATGG CTGCCGCTTTTAGTGCTAGCGTGAGAAATGATGAGAGCTGGGCAGTTCATAAGCTTCTTT TTCGTGTGTTTGTGATTAATGTTACTTATTTATACGAGAAGTGTTT