Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006587_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:211693320:211694733:-1 gene:Zm00001d006587 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP29.1 chloroplastic
Sequence

ATGGCTTCGTCGGTGGCCGCCGCGGCGAGCACATTCCTGGGCACCCGCCTGGCGGACCCG
GCGCCGCAGAACGGGCGCATCGTGGCCCGGTTTGGGTTCGGCGGCGGAAAGCCCAAGGCT
GCCGTCCCGAAGAAGGTGGCGAAGACGTCGATCTCCTCTGACCGGCCGCTGTGGTTCCCC
GGCGCCGTGGCGCCCGACTACCTCGACGGCTCGCTGGTCGGCGACTACGGGTTCGACCCG
TTCGGGCTCGGGAAGCCCGTGGAGTACCTGCAGTTCGAACTGGACTCGCTGGACCAGAAC
CTGGCCAAGAACGAGGCCGGCGGCATCATCGGCACCCGGTTCGAGTCCTCCGACGTCAAG
TCCACCCCGCTCCAGCCCTACAGCGAGGTGTTCGGCCTCCAGCGGTTCCGCGAGTGCGAG
CTCATCCACGGCCGATGGGCCATGCTCGCCACCCTCGGCGCCCTCACCGTCGAGTGGCTC
ACCGGCGTCACCTGGCAGGATGCTGGCAAGGTGGAGCTGGTGGATGGGTCCTCCTACCTG
GGCCAGCCGCTGCCGTTCACCATCTCGACGCTCATCTGGATCGAGGTGCTTGTGATCGGC
TACATCGAGTTCCAGCGCAACGCCGAGCTCGACCCGGAGAAGAGGCTGTACCCCGGCGGC
TCCTACTTTGACCCGCTCGCCTTGGCGGCCGACCCCGAGAAGAAGGAGCGGCTGCAGCTG
GCGGAGATCAAGCACGCGCGCCTCGCCATGGTCGCCTTCCTCGGCTTCGCCGTGCAGGCC
GCCGCCACCGGCAAGGGGCCACTCAACAACTGGGCCACCCACCTTAGCGACCCACTCCAT
ACCACCATCTTCGACACGTTCGGAGGATCCTCTTAA

Peptide Sequence

PEP ID

Zm00001d006587_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:211693320:211694733:-1 gene:Zm00001d006587 transcript:Zm00001d006587_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP29.1 chloroplastic
Sequence

MASSVAAAASTFLGTRLADPAPQNGRIVARFGFGGGKPKAAVPKKVAKTSISSDRPLWFP
GAVAPDYLDGSLVGDYGFDPFGLGKPVEYLQFELDSLDQNLAKNEAGGIIGTRFESSDVK
STPLQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL
GQPLPFTISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLALAADPEKKERLQL
AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFGGSS

Transcript Sequence

Transcript ID

Zm00001d006587_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:211693320:211694733:-1 gene:Zm00001d006587 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chlorophyll a-b binding protein CP29.1 chloroplastic
Sequence

ACGCCACACACCACCACCGGACGCTAGCTGACCACCAACCTCAGCACATCGAGGAGAGGA
GGAGTGGCCATGGCTTCGTCGGTGGCCGCCGCGGCGAGCACATTCCTGGGCACCCGCCTG
GCGGACCCGGCGCCGCAGAACGGGCGCATCGTGGCCCGGTTTGGGTTCGGCGGCGGAAAG
CCCAAGGCTGCCGTCCCGAAGAAGGTGGCGAAGACGTCGATCTCCTCTGACCGGCCGCTG
TGGTTCCCCGGCGCCGTGGCGCCCGACTACCTCGACGGCTCGCTGGTCGGCGACTACGGG
TTCGACCCGTTCGGGCTCGGGAAGCCCGTGGAGTACCTGCAGTTCGAACTGGACTCGCTG
GACCAGAACCTGGCCAAGAACGAGGCCGGCGGCATCATCGGCACCCGGTTCGAGTCCTCC
GACGTCAAGTCCACCCCGCTCCAGCCCTACAGCGAGGTGTTCGGCCTCCAGCGGTTCCGC
GAGTGCGAGCTCATCCACGGCCGATGGGCCATGCTCGCCACCCTCGGCGCCCTCACCGTC
GAGTGGCTCACCGGCGTCACCTGGCAGGATGCTGGCAAGGTGGAGCTGGTGGATGGGTCC
TCCTACCTGGGCCAGCCGCTGCCGTTCACCATCTCGACGCTCATCTGGATCGAGGTGCTT
GTGATCGGCTACATCGAGTTCCAGCGCAACGCCGAGCTCGACCCGGAGAAGAGGCTGTAC
CCCGGCGGCTCCTACTTTGACCCGCTCGCCTTGGCGGCCGACCCCGAGAAGAAGGAGCGG
CTGCAGCTGGCGGAGATCAAGCACGCGCGCCTCGCCATGGTCGCCTTCCTCGGCTTCGCC
GTGCAGGCCGCCGCCACCGGCAAGGGGCCACTCAACAACTGGGCCACCCACCTTAGCGAC
CCACTCCATACCACCATCTTCGACACGTTCGGAGGATCCTCTTAAGCCCGCCATTGATCC
GCTCCGTCCATCGATCGAAACGTGGTCTTGAATTAACTATGATAGATCTCTATGAGCCTG
GAGATGGATCAACCCGTCGTGCGTTGTTTCATTTTGTGATGAATGGGAGAGAGGGTATGG
GACAAGATTGATCAACCCGTCGTGCTTACGTCTCGTTAATTAGGAGAGCTACCGCTCGGA
TTTGGTGATTTGTAATATATGAACCAGTGATGAATAAATGCATTCACTTGTACACATCCA
TCTTGAGGTGACCGAGGATATAAGACGCACCAAGGTGAGGATGAAAGTTTTTGAGTCAAT
CGTTTATCAAATAATACAAAGAAATATGTCC