Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006580_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:2:211461391:211469398:1 gene:Zm00001d006580 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	ATGCCGCCGCGACGCGGTAGGGGAAAGGGTAAGGGTAGGGCAAAGCCAAGAGCGAAGCCC ACCGAGCCCGAGCCCGAGTCCGATCCCGAACTAGACGAAGCCGCCAAGTCCGAAATCGAG GCGGGGGACGCGGAGGCTGGGGAGGAGTCCAGCGCCGAGAGCGAGGACTCGAAGGAAGAC GAATCGGAGAGCGACACCGAGTCCATGGATGCAGAGGCCAGCGAAGAAGCTGGCGAGAAC GGAACGGAGGAGATGGATGCAGAGCCTGAAGCCAAAGCCGTCGAGGCCAAGGCTGAAACG GTGGCCACGGAGGCGGAGGCGAAGCCTGACGCCTCGGATGAAGAAGCTGGTGAGACTGGC TCAGACCGCGAAGCAGATGGCAAGGGTGCTGATCCGAAGGCGAAAGCGGAGGAGTCCGAC GGCGAGGATGAGGAGGGAGCCACCGCCGTGACCGACGGCGATAGTGAAGAGGAAGCCGCT GAGACGGGCGGCGAGAGCGAAGAGGATGGTGGCGACTCCGACACCGAAGGTGATGCCGAG GAATCTCCTCCATCCCCTCCTCGCCGCAGTCGCCGCCGTAAGCGAGCGGCCACTCCCGAT GACGAAGCAGAGGAGACCCCTACGCCGTCGCGTCGCCGGCGCCGTCGGAAGTCAGGGGAG CGTGGTGACTCCCCGCCGCCACTTCCTGACCACCTCCGCTGCCGTCGCAGCGACGGGAAG AAGTGGCGCTGCTCGGGCCGTGCACTCCCAACCGTTAGCTTTTGCGAGTACCACTACGCG AGGGCTAACAAGGGTAAGAAGTTACCAGCGGATGAGGAGGTCCTTGCTGTTGTTCTTCAG AGGCAGAAGAACAAGAGGAAGGGCAGGAGGAGCATCAATCCTCCGACGTCCCCTCAGGCA GCCACGAGTGACCCCCAGACCAGGGATCTCCCAAATGGACTGATGACGATCTCGCCAGGT AGCAGTGGACCTGCGGCATTGTCAACTCCTGTGAAGATTGGTGTAGAAATTCCTGCACCC ATACAGCGGTGCTATCGTTCCAAGAATGCTGAGCCATTGCCTGTTGGTCCTGTGAAGGTT GTTCCTCGTGCGATGAGTGTGACAAAAACAGCAAGAACATGTCACTGCTGTGGAATGAAG AAGGCTGCACGTGTGGCCAATTGCAAGAACTGTGATAAGAACTTCTGTAACAGCTGCATT AATAAATGGTATTCTAAGTTGTCCAGGAAAGATATAAAGGCTCGTTGTCCAGCTTGCCGT GGTCTCTGCAATTGTAAACCATGCAGCCTTGGTAATTCCAAGGGTTCTACGCCTAAGGAA CCGCCAAAAGTTGAAAGGAAGATACTTAGCATAAAAATTTCCAACCATCAATTTTACAAG CTTTTACCTGTAAGACTTGACCAGGAACAGCTAGATGAGTTGGAACTGGAAGCTAAAATA CAAGGAACAAAAATATCTAATGTCTGCGTCCAGGTTGCTGAAACTGGTCAGAGTGAGTCA CTCTACTGTAATAACTGTAAGCTCTCGATGAGCCGATTATTAAGGTGCTGCCCAACATGC CCGTTTAAGCTGTGCCTAAGTTGCTGTCAGAAGATACGTGAAGGAAACATGTCGGACAAC ACCCCTGAAGATAAATTCAAGAATCGGTTGATTCAACAAGAGTCTGTCCATGAGGATGGC AGTATTACTTGCCCTTCGATTGAGCTGGGTGGATGTGGTGACGCCATGCTGAACCTAATA TATTCATCTCCATCTAGCCAGTCCGAAGAGCTCAGTTCAGAATGTGAGCTAGATGCTGCA GGCAATCATTCTGGAGTGAAGGATGCTCAGGCTCATGGGTCACCTGTACCTGAGAGTAAT GGAAGATTATTGGCTGCTGCCCAGGCAGAAACAGTGTCTGAGGAATGA

Peptide Sequence

PEP ID	Zm00001d006580_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:2:211461391:211469398:1 gene:Zm00001d006580 transcript:Zm00001d006580_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	MPPRRGRGKGKGRAKPRAKPTEPEPESDPELDEAAKSEIEAGDAEAGEESSAESEDSKED ESESDTESMDAEASEEAGENGTEEMDAEPEAKAVEAKAETVATEAEAKPDASDEEAGETG SDREADGKGADPKAKAEESDGEDEEGATAVTDGDSEEEAAETGGESEEDGGDSDTEGDAE ESPPSPPRRSRRRKRAATPDDEAEETPTPSRRRRRRKSGERGDSPPPLPDHLRCRRSDGK KWRCSGRALPTVSFCEYHYARANKGKKLPADEEVLAVVLQRQKNKRKGRRSINPPTSPQA ATSDPQTRDLPNGLMTISPGSSGPAALSTPVKIGVEIPAPIQRCYRSKNAEPLPVGPVKV VPRAMSVTKTARTCHCCGMKKAARVANCKNCDKNFCNSCINKWYSKLSRKDIKARCPACR GLCNCKPCSLGNSKGSTPKEPPKVERKILSIKISNHQFYKLLPVRLDQEQLDELELEAKI QGTKISNVCVQVAETGQSESLYCNNCKLSMSRLLRCCPTCPFKLCLSCCQKIREGNMSDN TPEDKFKNRLIQQESVHEDGSITCPSIELGGCGDAMLNLIYSSPSSQSEELSSECELDAA GNHSGVKDAQAHGSPVPESNGRLLAAAQAETVSEE

Transcript Sequence

Transcript ID	Zm00001d006580_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:211461391:211469398:1 gene:Zm00001d006580 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysine-specific demethylase JMJ25
Sequence	GAGCCGGTGCACGCACCACTTCCCCCACTTCGATCTAGCATAATCCGACTCCGCCGACTC GCCTGAACCCTAGCCAGCCGCCGCCATGCCGCCGCGACGCGGTAGGGGAAAGGGTAAGGG TAGGGCAAAGCCAAGAGCGAAGCCCACCGAGCCCGAGCCCGAGTCCGATCCCGAACTAGA CGAAGCCGCCAAGTCCGAAATCGAGGCGGGGGACGCGGAGGCTGGGGAGGAGTCCAGCGC CGAGAGCGAGGACTCGAAGGAAGACGAATCGGAGAGCGACACCGAGTCCATGGATGCAGA GGCCAGCGAAGAAGCTGGCGAGAACGGAACGGAGGAGATGGATGCAGAGCCTGAAGCCAA AGCCGTCGAGGCCAAGGCTGAAACGGTGGCCACGGAGGCGGAGGCGAAGCCTGACGCCTC GGATGAAGAAGCTGGTGAGACTGGCTCAGACCGCGAAGCAGATGGCAAGGGTGCTGATCC GAAGGCGAAAGCGGAGGAGTCCGACGGCGAGGATGAGGAGGGAGCCACCGCCGTGACCGA CGGCGATAGTGAAGAGGAAGCCGCTGAGACGGGCGGCGAGAGCGAAGAGGATGGTGGCGA CTCCGACACCGAAGGTGATGCCGAGGAATCTCCTCCATCCCCTCCTCGCCGCAGTCGCCG CCGTAAGCGAGCGGCCACTCCCGATGACGAAGCAGAGGAGACCCCTACGCCGTCGCGTCG CCGGCGCCGTCGGAAGTCAGGGGAGCGTGGTGACTCCCCGCCGCCACTTCCTGACCACCT CCGCTGCCGTCGCAGCGACGGGAAGAAGTGGCGCTGCTCGGGCCGTGCACTCCCAACCGT TAGCTTTTGCGAGTACCACTACGCGAGGGCTAACAAGGGTAAGAAGTTACCAGCGGATGA GGAGGTCCTTGCTGTTGTTCTTCAGAGGCAGAAGAACAAGAGGAAGGGCAGGAGGAGCAT CAATCCTCCGACGTCCCCTCAGGCAGCCACGAGTGACCCCCAGACCAGGGATCTCCCAAA TGGACTGATGACGATCTCGCCAGGTAGCAGTGGACCTGCGGCATTGTCAACTCCTGTGAA GATTGGTGTAGAAATTCCTGCACCCATACAGCGGTGCTATCGTTCCAAGAATGCTGAGCC ATTGCCTGTTGGTCCTGTGAAGGTTGTTCCTCGTGCGATGAGTGTGACAAAAACAGCAAG AACATGTCACTGCTGTGGAATGAAGAAGGCTGCACGTGTGGCCAATTGCAAGAACTGTGA TAAGAACTTCTGTAACAGCTGCATTAATAAATGGTATTCTAAGTTGTCCAGGAAAGATAT AAAGGCTCGTTGTCCAGCTTGCCGTGGTCTCTGCAATTGTAAACCATGCAGCCTTGGTAA TTCCAAGGGTTCTACGCCTAAGGAACCGCCAAAAGTTGAAAGGAAGATACTTAGCATAAA AATTTCCAACCATCAATTTTACAAGCTTTTACCTGTAAGACTTGACCAGGAACAGCTAGA TGAGTTGGAACTGGAAGCTAAAATACAAGGAACAAAAATATCTAATGTCTGCGTCCAGGT TGCTGAAACTGGTCAGAGTGAGTCACTCTACTGTAATAACTGTAAGCTCTCGATGAGCCG ATTATTAAGGTGCTGCCCAACATGCCCGTTTAAGCTGTGCCTAAGTTGCTGTCAGAAGAT ACGTGAAGGAAACATGTCGGACAACACCCCTGAAGATAAATTCAAGAATCGGTTGATTCA ACAAGAGTCTGTCCATGAGGATGGCAGTATTACTTGCCCTTCGATTGAGCTGGGTGGATG TGGTGACGCCATGCTGAACCTAATATATTCATCTCCATCTAGCCAGTCCGAAGAGCTCAG TTCAGAATGTGAGCTAGATGCTGCAGGCAATCATTCTGGAGTGAAGGATGCTCAGGCTCA TGGGTCACCTGTACCTGAGAGTAATGGAAGATTATTGGCTGCTGCCCAGGCAGAAACAGT GTCTGAGGAATGAAGATGCAGCTATGGTTGGCTCATCGTTCAGGTGGGAGCGCAAGCTGA CATGTTCACTAGCATGAAGCCTGAAGATGTGTATGATACGGTCCGGATTCGATAGAGGGT AGGTTGCTTAATTTAGCTAGGTTATCGGCCTATATGGCTATTGATTTTAGGCCTGTGACC TGGGGATATGTTTCGTCTTTGATCCGGGAGTCGTTATGTTAAACATCGTTGTACATATGG TTATGGCTTTATTTTTGTCATTACCGAGAGGCGGGAGCTGATGGATTGGTTGTATTGTCG TTCGTCTAAGGGATTACCTTGATAATTTTTATGTGCGGTACTATCAGTATTCAGTAGCCC ACATGGATCGTATTGTTGACTTGTTGTCATTCGAGGCTAGTTTCATGTTGTCATTGACCA TTGCGGCTCGATGGTGAAAGCATTACGAAGAGGCAGTACTATTGTCAATGTATTACAGTT GATTGCAATGTTTATTCAAAAACAT