Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006552_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:2:210872703:210879462:1 gene:Zm00001d006552 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT dimerisation domain-containing protein
Sequence	ATGTCTTCTCGAAATGAAGCTCCATCTTCTGTGGCTGGTGAGTACGATCCGAAGAGCGAT CCTACCCGGAAGCCACGGAAGTCTACTGATCCAGGGTGGAAGTATGGATTTTGGCCAGAT CTTCAAAATAAAGATAAGGTGGAATGCACCCTATGTGGCCAGGTTGTTAGTGGAGGGATA AAGAGGTTAAAGCAACATTTGGCAGGGGCATATGGAGATGCAAAGTTATGTCCCAAGGCT ACCAGTGGAATAAGGAAGGAGATGACAAGTTATTTGGAGGCAAACAAGAGAAAAAGACCA ATGTTTCTAGATGAAGATGAAGAAGATGATGAAGTGGTGGAGGTGGCAGCAGCAGATGGG ACGAATGATACATCTGCTGTGGAGTCTCAAGCATCCAAGGTGCAGCCTAGTTCTGGTACA GCAGCCAAAAAAAGACAATCGACCTTGCAATTTAAGGCAAACAGTAAAGCACAGCAAAAG ACAGCCAAGTCCGTAGTTGAGATGTTGCGGAAAACACCAGAGGAGGTGGTGGATGAGAGA CTTTCAGGCTCTTATCAGCCCACAATCTTGGCTAGTGCAAAAAGCAAGGAGGACAAACAC TATGTGGACATGCAGTGGGCTTTGTTCTTCTATGAGTGCGGTGTACCTTTCAATGCCGCA GCAGCTAGGCAGTTTCAGATTGCAATTGAGGCCACAGCACAGTTTGGTTCAGGGTATAAG CCCCCAACACCTTACCAACTAGGCGAGCCATTGCTACAAGAGGCTGTGAAGACAACAAAT ACAATGAGGGAGGAACATGAGCGTGCATGGAAACACTATGGTTGCACACTCATGTCTGAT GGATGGTCTGATAGGAGGGGACGCCATCTCATTAACTTCTTAGTGAACAGCCCAGAGGGC ACTTATTTTTTAGAGTCCGTTGATGCATCTAGTGAAGTACATGATGCATACATGCTTGCT GATTTGCTTGAGAAAAAAGTTGATGAGATTGGGAGAGACAAGGTTGTACAAGTTGTTACT GATAATGGTGCCAATTACAAAGCTGCAGGCAAGCTTCTAATGGAGAGGATTCCTACTTTA TTTTGGAGTCCATGTGCTGCACATTGCTTGGACCTAATGTTGGAGGACATAGGAAACTTG AAGGAATTCAAGAAACCAATTGCACGTGCAAGGCGTGTGACAACTTTCATATACCGACAC GGGAGAATTCTTGCTGCCATGAGAGAGAAAACTGGTGGGGCTGATCTTGTGAGGCCTGCA GCCACTCGTTTTGCTACTTCCTTTCTCACATTGAAGAGCTTGTACAAGCACAAGGATGCT TTGAAGGCTTTATTTGCAAGCACAGCTTGGACTGATAACAGATTGTCAAAGACTAGTGCT GGATTGGATGTGTATAACATTGTCTTCTCCACACAGTTTTGGAATTCAGTAGAAGATTGC CTTAGAGCTTCGGGGCCACTACTTATTGTACTTAGGGTGGTAGATGGAGATGAGAGGCCA GCTATGCCAGAGGTCCAAGCATTGATGAAATGTGCAAAGGAAAAGATCAATCAAAGCTTT GCTGTCCAAAGCAAGAAGACTTTACTCAAGAAAATCATAACTATAATTGAACGGCGTTGG GAGAAACAAATGGATCACCCATTGTATGGGGCTGCAATGTATTTGAACCCAGGAAAGTTG CATCCTCTCATAAGAAATGATGATGATGCTACTGTTGGTCAGCTAAGAGGTTGCTTTCTT GATGTGCTTGCAAGAATGGTAGATGATGAGGAAACTAGAGACAAGATCAATTCTCAAGCA ATGGATTACGAGTTTCTTAGAGGAGCAGCTTTTTCAAATAAGATGACCAAAGATAACCTA CAAACTATGACCCCACGTAAGTGTTTGTGGCTGTTACTAGTTTACTACTTACTAGTTGTT GCTAGTAGCTTGCTAAATTGTTGTGATGTTATTGCAGTTGAGTGGTGGCGTTCGTATGGT GGTCGTGCTATTGAGTTACAGAGATTTGCTAGACGTTTGGTGAGTCTTTGTGCGTCTTCA TCAGGTTGTGAACGCAATTGGAGTACCTTTGAATTTGTAAGTTATTATGTGTGCCTCCTC AAGTCCTCATCCACCTACTTGGCTACTTTTGTATCCAATATTTCGGGATTAAATGACCAA GTGTTTTCTCTTTTCTTATTTTGTAGATCCATACAAAGAAAAGAAACCGATTGTTGCATA AGAGGTTGA

Peptide Sequence

PEP ID	Zm00001d006552_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:2:210872703:210879462:1 gene:Zm00001d006552 transcript:Zm00001d006552_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT dimerisation domain-containing protein
Sequence	MSSRNEAPSSVAGEYDPKSDPTRKPRKSTDPGWKYGFWPDLQNKDKVECTLCGQVVSGGI KRLKQHLAGAYGDAKLCPKATSGIRKEMTSYLEANKRKRPMFLDEDEEDDEVVEVAAADG TNDTSAVESQASKVQPSSGTAAKKRQSTLQFKANSKAQQKTAKSVVEMLRKTPEEVVDER LSGSYQPTILASAKSKEDKHYVDMQWALFFYECGVPFNAAAARQFQIAIEATAQFGSGYK PPTPYQLGEPLLQEAVKTTNTMREEHERAWKHYGCTLMSDGWSDRRGRHLINFLVNSPEG TYFLESVDASSEVHDAYMLADLLEKKVDEIGRDKVVQVVTDNGANYKAAGKLLMERIPTL FWSPCAAHCLDLMLEDIGNLKEFKKPIARARRVTTFIYRHGRILAAMREKTGGADLVRPA ATRFATSFLTLKSLYKHKDALKALFASTAWTDNRLSKTSAGLDVYNIVFSTQFWNSVEDC LRASGPLLIVLRVVDGDERPAMPEVQALMKCAKEKINQSFAVQSKKTLLKKIITIIERRW EKQMDHPLYGAAMYLNPGKLHPLIRNDDDATVGQLRGCFLDVLARMVDDEETRDKINSQA MDYEFLRGAAFSNKMTKDNLQTMTPRKCLWLLLVYYLLVVASSLLNCCDVIAVEWWRSYG GRAIELQRFARRLVSLCASSSGCERNWSTFEFVSYYVCLLKSSSTYLATFVSNISGLNDQ VFSLFLFCRSIQRKETDCCIRG

Transcript Sequence

Transcript ID	Zm00001d006552_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:210872703:210879462:1 gene:Zm00001d006552 gene_biotype:protein_coding transcript_biotype:protein_coding description:hAT dimerisation domain-containing protein
Sequence	GTAACAGGACAGTCTGATGAAATTGCTGTCAAGGAAAGGTATGTGCTGTAATCTACTGAC CGTCGTATGTACAGTAAGTGCAAACATGTCCAAACTCATATTGCCTGACATTCTAATCCC AACTTGTGTATAAGTCTCTGGTATGTGACCTTTGGTTACTCCATGCTCATTCAGTTTCAT GACCCTGAATGCATCTGTTACGCAATTTAGCATGCTTGCTGCATTGCTTTGGAGTCTGGA ACCATATATGTTCAAAGATAAAAACAACACCAACTATGCCCTCCAGGGTCAGTGTTTCTG CATACCTTTTTCCTTATGCTTCTACATAGGTAACATTTAATTGACTGTTGTAGGGGTGGT TTTGTTGTCTTTATGATTAGATGGTGCTGTTCACCTTAAATTTTGTCAAATGTTGCATCA CTGCAGTCACCAACCATACATGGAAAAGTTTTAGTGAAGTCTATGGAGCAAACAATTTAA TATTTCATTCTATCAATTAAAAAAGTATGGTTTTGCTTCGGATGAGATCTCCATAAACAA TGGACAAGTGTAAAGGAGAATATTGATGGTTGGAATGAGTGGTGGTAGCAGAATGATGTC TACATTCATTGAATGTAGGTAACGGCACCTCAATTTTTTTTTGAATATGCGGGAACTTGG ATCTTTGTTTCCACAATTTATTAGTGATGCTTATGTTTGACAAGAATTAGGTTTGGGACC GATATATTTAAGTATTGTGTATGATATATGTAGTGTCAAATAAAATTTACTATTATTTTG ACTTCTTTTTGTTACTTCAAATGCCCTAGGCCATCTCTCTTTGGTGGTGCTCGCCCCAGG GAACAAGTTCTCAAAGAACGTGGAGTGGATGTTTTGGCCAGTGATCTCGAGAAGACTTCA CCAGTTGGCAGGTTGTTATATGTTGTGATGCATCATGTTAACATTGATAGATGCATTTCA GTTGTGGCAGGGCATAAGTTCTGATTTATTTATTGGATCTTGATATCAAAGGGTGTTAGA GCATCTTCAAGAGTTCCTAAAAAGACAATTGGTAAATCAATGAATTCTCTATGTGGTTAA AAAAAGTTGGGTTCCTCCAATTGTTTCCAAAAATCTTTCTTTTAAGAGATATAAGGAATT TTTTTGTATCAGAAATCCCGGACTATTTACAGATCACCCATTAACTTTAATATTTTCTTT CGTTCTTGTACATTTGCATTGTGAACCCTGTCCTTACTCTTACAGTTCCCCACATCCTTC CACCTCCAGATTGGCTGATTGACACGTTCGTGTATATTTGGGCACGATTGGGTCGATTTC CCCACGTGTGGAAAGATTGGGAGTTGTTGGAGATAGTTTTTTTTTTCAATTTTACCAAAA AATTAAGGTTGGAAGTGGGTTTTGGAAGCTCTTGGAGATGCACATAGATGGTAGTTTGTT ATTACTACATGAAGAAACAATAAACAAATATAAGATAACTCCATGGTTTAAAAGTCGTCG CCTAGGCGTCGCCTAGGCGACGCCTAGGCGTCCAGGCGGGGAAATCTTCTAGGCGTCGGC GCCGCCCAGAGGAAATCGTGTATGGCGTCCGCCTTGGCGAGGTAGGCGTCCGCCTTGGCG TCGTAGGCGTCTGGGCGACGCCTTTTCCTCCCTGGGCGACGCCTTATCTCGTTTTGGGCT TTAGGGTTTTGGCGGCTAGGCGCGCGTTCTGTTTTGGGCCTGTTCCACTGTGCGCGCGCG GCAAAAATACATTGTGCGTGCGCGGCGCCGCGGCTGCTCCTTCGCGCGCAAATCTCTCTG CGCTCTCTCCCTGCTGCTCCTCTCTCCCTGCGCGCGGCGGCTGCTCCTCTCTCCCTGCGC GCGGCGGCTGCTCTGCGCGCGGCGGCTGCTGCGTTCTCCCTGCGCGCGCGCGGCTGCTGC GTGCTCCCAGCGCGCGGCTCCCTGCTACCAGCGCGCGGCTGCTGCTCTCTGCGCGTGGTC TTGCGGCTCCCTGCTCCTTGCCGCAGTGCTAGCTGCTGCTGCTGGTAAGTCCTAGTGTCG GCTTACTCCTCCCCTCCTCAAAATGATGTTTCTCATCCCCTCCTCCCCTGCTTCCCCTGG TTTCAGACTGCGCAACGAGTAGGTTTCTGTCAAGTGTCAAGACTGCAGCGACTAGCGACA AGCCGACAACATAATGTCTTCTCGAAATGAAGCTCCATCTTCTGTGGCTGGTGAGTACGA TCCGAAGAGCGATCCTACCCGGAAGCCACGGAAGTCTACTGATCCAGGGTGGAAGTATGG ATTTTGGCCAGATCTTCAAAATAAAGATAAGGTGGAATGCACCCTATGTGGCCAGGTTGT TAGTGGAGGGATAAAGAGGTTAAAGCAACATTTGGCAGGGGCATATGGAGATGCAAAGTT ATGTCCCAAGGCTACCAGTGGAATAAGGAAGGAGATGACAAGTTATTTGGAGGCAAACAA GAGAAAAAGACCAATGTTTCTAGATGAAGATGAAGAAGATGATGAAGTGGTGGAGGTGGC AGCAGCAGATGGGACGAATGATACATCTGCTGTGGAGTCTCAAGCATCCAAGGTGCAGCC TAGTTCTGGTACAGCAGCCAAAAAAAGACAATCGACCTTGCAATTTAAGGCAAACAGTAA AGCACAGCAAAAGACAGCCAAGTCCGTAGTTGAGATGTTGCGGAAAACACCAGAGGAGGT GGTGGATGAGAGACTTTCAGGCTCTTATCAGCCCACAATCTTGGCTAGTGCAAAAAGCAA GGAGGACAAACACTATGTGGACATGCAGTGGGCTTTGTTCTTCTATGAGTGCGGTGTACC TTTCAATGCCGCAGCAGCTAGGCAGTTTCAGATTGCAATTGAGGCCACAGCACAGTTTGG TTCAGGGTATAAGCCCCCAACACCTTACCAACTAGGCGAGCCATTGCTACAAGAGGCTGT GAAGACAACAAATACAATGAGGGAGGAACATGAGCGTGCATGGAAACACTATGGTTGCAC ACTCATGTCTGATGGATGGTCTGATAGGAGGGGACGCCATCTCATTAACTTCTTAGTGAA CAGCCCAGAGGGCACTTATTTTTTAGAGTCCGTTGATGCATCTAGTGAAGTACATGATGC ATACATGCTTGCTGATTTGCTTGAGAAAAAAGTTGATGAGATTGGGAGAGACAAGGTTGT ACAAGTTGTTACTGATAATGGTGCCAATTACAAAGCTGCAGGCAAGCTTCTAATGGAGAG GATTCCTACTTTATTTTGGAGTCCATGTGCTGCACATTGCTTGGACCTAATGTTGGAGGA CATAGGAAACTTGAAGGAATTCAAGAAACCAATTGCACGTGCAAGGCGTGTGACAACTTT CATATACCGACACGGGAGAATTCTTGCTGCCATGAGAGAGAAAACTGGTGGGGCTGATCT TGTGAGGCCTGCAGCCACTCGTTTTGCTACTTCCTTTCTCACATTGAAGAGCTTGTACAA GCACAAGGATGCTTTGAAGGCTTTATTTGCAAGCACAGCTTGGACTGATAACAGATTGTC AAAGACTAGTGCTGGATTGGATGTGTATAACATTGTCTTCTCCACACAGTTTTGGAATTC AGTAGAAGATTGCCTTAGAGCTTCGGGGCCACTACTTATTGTACTTAGGGTGGTAGATGG AGATGAGAGGCCAGCTATGCCAGAGGTCCAAGCATTGATGAAATGTGCAAAGGAAAAGAT CAATCAAAGCTTTGCTGTCCAAAGCAAGAAGACTTTACTCAAGAAAATCATAACTATAAT TGAACGGCGTTGGGAGAAACAAATGGATCACCCATTGTATGGGGCTGCAATGTATTTGAA CCCAGGAAAGTTGCATCCTCTCATAAGAAATGATGATGATGCTACTGTTGGTCAGCTAAG AGGTTGCTTTCTTGATGTGCTTGCAAGAATGGTAGATGATGAGGAAACTAGAGACAAGAT CAATTCTCAAGCAATGGATTACGAGTTTCTTAGAGGAGCAGCTTTTTCAAATAAGATGAC CAAAGATAACCTACAAACTATGACCCCACGTAAGTGTTTGTGGCTGTTACTAGTTTACTA CTTACTAGTTGTTGCTAGTAGCTTGCTAAATTGTTGTGATGTTATTGCAGTTGAGTGGTG GCGTTCGTATGGTGGTCGTGCTATTGAGTTACAGAGATTTGCTAGACGTTTGGTGAGTCT TTGTGCGTCTTCATCAGGTTGTGAACGCAATTGGAGTACCTTTGAATTTGTAAGTTATTA TGTGTGCCTCCTCAAGTCCTCATCCACCTACTTGGCTACTTTTGTATCCAATATTTCGGG ATTAAATGACCAAGTGTTTTCTCTTTTCTTATTTTGTAGATCCATACAAAGAAAAGAAAC CGATTGTTGCATAAGAGGTTGAATTCTATTGTCTTCATTTCCTACAACAGAAAGATGAAA GCTAGGTTCCAAAAACTACGCCAGAAGAAGGGGAAAAACTTTGATCCATTGGTTCATGAG GACTTCAACTGGGACAATGAGTGGGCTGATTCTTTGCATGTAGTCCCTGAAGGTGGGCGT GGGTGTGAGTGTGACCTTACATGGGACCTTGTGGATAATGCCATTGGAGCATCGCAAGCA CTTCGTGGCCGAAACTTACCAAGAAGGGCCCATAATGTGTATTCAAGAAGAAATTCTGTT GCTGCACAAAACATGTCAGAGGCTGAAGAGGAAGATGAAGATGAAAATGAAGATGTTCCA CATGACGATGCAGAAATCACAGATTGTGAAGATGAATCTAATGGTGGCAATGCTGGTGAA GAAGGGGAGGCACCCAATATCCCAGGAGAGTTTGATGATGATTTTTGAGCGACGAGAGAC AGGGAGAGTAGCTATTGCTAGATTGCATTAGCAATTTAGCATATTTGCTGCATTACTAAC TGCAGCTAGTTACTATTAATTATGCCATTACAAACTATCTATGTGGCTATTTCAGATTTG GACATTTGGTATTGTGTTGTTTTAAATTTTGTGACTTGTTGTTGTTTGTGGCTGTTACTA GTTTACTACTTACTAGTTGTTGCTAGTAGCTTGCTAAATTGTTGTGATGTTATCTACTAA GGCGTCGCCTAGGCGCCCGCCTAAGTCGCCTAGGCGGTCAGGCGGTGGCTGGGCGCCTAG TTCCGCCTAGCCGCCTTTTAAACCATGGATAACTCATCTCTATTAGGTAAGTGCATGGAT TTCTGATAATTGAGTGAGTGACACTAATAATATTTGAGTAATGCTTAAGAATCTTTCGGG GCTTCTGTGCATTATGCCAAGAGTTAACTGTTCTATTAGAAAAAAGAATGATCGTGTTGT ATTCTTATTACAGAAATTCATTAGGTTTCATTTCATGAACCATGAAATGGGGCTGATGAG AAAAAATGTAATGCTTGATGTGCAACCTTACCAGATTTTTCTTGTTTTATTTTATTCCAC CATGGTTGAAACCGAATTTCATTACTGGAAGCAACGAAATTGCAAGTCTGATAGTACATA TTACATGAAGTACTAAATGAAATGAGTGCCATCTCCTCTGGACACCTAGGGTCTAGCCAG GATGGCAACAAAAAACCACAGCTAAAAGTATTTTTTCTTGAAGAGGTTACTGGAGAACAG CATAAGTTTAACTGGTGTTACATTTACTTAATTGTCTCTGTCATTTGTAGGCCTAAAGGC GAATTTGCAAAGGTTGAGCAGAAGGTTGAAGCTATGTCCATTAACCCTTCTGTTGAAAGA CATGAGAGTTTTGCAGCTGGTCATAGAGGCCCAAGGAATGGTGATAAGAAAGATCATAAG TGGAATACTGACAGGGCTGATGCATATAGGCTTACTCGTCGAGAGGACAACAGGAGGGTT GCTAGAGATATGGAGAAGCCACAGGAGCAACCACGCCCAGAGCCTGAGACCTGGCGTAAG CCGGTGGAGCCTCCAAAGCTAGAGGTTGCAACACCTCGTTTTGGGAAAGCAGCAACCGCG TTGGAGCTCGCCCAGGCCTTCTCAACGTCTATGTCTGATACTGCACCACAGAGCCGGTTG ACCAGTGCTCCCAGTCCAAGAGTTCCTCCTAGCCCAGGGGCTAGTAGGGATCAGTCTGGC TTTTCAAGGCTCACTGACAGCAGGACGTTACACTCGGGCCCTTCCCAGCGAAAGATAAAT GGCTACTGATCGCTTGGCACACATATTACATGTGCCACGATGATAGCCCAGGCATCATGG CCTCGATGAAGCGCCCAGCTGTATCTTCATACTCAACTGTCCCTGCGTGGAGAAGTCCAG TTGTTGCTCTGTCCAATGGTGGTACGCGAGGGTCTCTAATCTCATTGCTGGCAAGCAAAA GGCTCCTCTCCCATAAGTTTCTGGTCAGTGATTTATAACTGACGGTTCGTTTCCTCTCTT GATAACGAGAGATGTGAATTTGTGAACTGTTTCTGCTTATGTTCGCCAGCCACTATTTAT TGCTGGGGAATAATTGCAGCTGCCTGCGCACCGTAGTTGGTTGCACTTGCAGACGCCGCA AAATTGGGATTTTATCGTGCTAGTTTTGTTTTTTTTTTTTGCCAGAAGAAACTATTGATA CTTTGTAGTCTTGTTTACTTTACGGTGATATTATGATTAGAGGATAGGACCTTCGTTCTT GGTTGTC