Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006540_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:210704728:210705781:1 gene:Zm00001d006540 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-evolving enhancer protein 3-1

Sequence

ATGGCACAAGCCATGGCGTCCATGACCGGCCTCTCGCAGGGCGTTCTGCCCAGCAGGCGC
GCCGCCAACAGGGCCAGGACGGCCGCCGTCGTCAGGGCGTCCGCCGAGGCGCAGGCGCAG
GCGCAGGCGGGCCGCCGCGCCGTGCTCGGGCTGGTGGCCACTGGCATCGTCGGCGGCGCC
TTGTCGCAGGCGGTGCACGCCGAGACCGTCAAGACCATCAAGATCGGAGCCCCGCCGCCG
CCCTCCGGTGGACTCCCCGGGACTCTGAACTCTGACCAGGCGAGGGACTTCGACCTCCCC
TTGAAGGAGCGGTTCTACCTGCAGCCGCTGCCGCCGGCGGAGGCGGTGGCGAGGGTGAAG
ACGTCGGCGCAGGACATCATCAACCTCAAGCCACTCATCGACAAGAAGGCGTGGCCGTAC
GTCCAGAACGACCTCCGCCTCCGGGCCTCCTACCTGCGCTACGACCTCAAGACCGTCATC
GCTTCCAAGCCCAAGGAGGAGAAGCAGAGCCTCAAGGAGCTCACCGGCAAGCTCTTCAGC
ACCATCGACGATCTTGACCATGCCGCAAAGATCAAGAGCACCCCGGAGGCCGAGAAATAC
TTCGCAGCAACCAAAGATGCGCTCGGCGACGTCCTCGCCAAGCTAGCCTAG

Peptide Sequence

PEP ID

Zm00001d006540_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:210704728:210705781:1 gene:Zm00001d006540 transcript:Zm00001d006540_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-evolving enhancer protein 3-1

Sequence

MAQAMASMTGLSQGVLPSRRAANRARTAAVVRASAEAQAQAQAGRRAVLGLVATGIVGGA
LSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAVARVK
TSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKQSLKELTGKLFS
TIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLA

Transcript Sequence

Transcript ID

Zm00001d006540_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:210704728:210705781:1 gene:Zm00001d006540 gene_biotype:protein_coding transcript_biotype:protein_coding description:Oxygen-evolving enhancer protein 3-1

Sequence

GCACGAGACTGCTCGGCCGACGAAATAATAAAGCGCGCGCGCGCACGCGGAGAGGCTCGG
AGAGCTGAGTGAGATGGCACAAGCCATGGCGTCCATGACCGGCCTCTCGCAGGGCGTTCT
GCCCAGCAGGCGCGCCGCCAACAGGGCCAGGACGGCCGCCGTCGTCAGGGCGTCCGCCGA
GGCGCAGGCGCAGGCGCAGGCGGGCCGCCGCGCCGTGCTCGGGCTGGTGGCCACTGGCAT
CGTCGGCGGCGCCTTGTCGCAGGCGGTGCACGCCGAGACCGTCAAGACCATCAAGATCGG
AGCCCCGCCGCCGCCCTCCGGTGGACTCCCCGGGACTCTGAACTCTGACCAGGCGAGGGA
CTTCGACCTCCCCTTGAAGGAGCGGTTCTACCTGCAGCCGCTGCCGCCGGCGGAGGCGGT
GGCGAGGGTGAAGACGTCGGCGCAGGACATCATCAACCTCAAGCCACTCATCGACAAGAA
GGCGTGGCCGTACGTCCAGAACGACCTCCGCCTCCGGGCCTCCTACCTGCGCTACGACCT
CAAGACCGTCATCGCTTCCAAGCCCAAGGAGGAGAAGCAGAGCCTCAAGGAGCTCACCGG
CAAGCTCTTCAGCACCATCGACGATCTTGACCATGCCGCAAAGATCAAGAGCACCCCGGA
GGCCGAGAAATACTTCGCAGCAACCAAAGATGCGCTCGGCGACGTCCTCGCCAAGCTAGC
CTAGATGGAAGCTAATAGATGGGTTAACGATGGCCACGTAATTTCGGACTTGTGTTTGTT
CATATGGAGCCGGCAAATGTACCGTTTCCTGTTCATATTATATCCCAAGTTCTTGACAAG
TACCTTTGCGGGCGGATGGAACATCAGAAACATTTTC