Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006539_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:210700847:210703733:1 gene:Zm00001d006539 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase
Sequence	ATGCTAACGGCCTCGCCGTCGTCTCAGGTGAAGCCGCAACAATGGGGTACATGCGGGGTC AGCGTGGCATCGACGCCGGCGCTTCTTCCGCCACCGGCCGCCGGACGGCTTGTCGCCGTC GATACCAGGAGGAGGACGAGGACGGTTGCCTCCGCCGCGCTTGGTCCTGTGGCCACCGAG CCCGCAGAAAGGTCTCCCGTGCCACAGCCCCCGCCACTGTCCAGCGACGAGGAGACGGTG CTCCGGCTCGGCAACTACGTCCCGGTCTTCGTCATGCTCCCACTTGAAGTGGTGACCACC GAGAACGACCTGGAGGACGCGGGGAAGCTGCGGGAGCAGCTGCGGCGGCTGCGGGGGGCC GGCGTCGACGGCGTGATGGTGGACGTGTGGTGGGGCGCCGTGGAGGGCGCCGGGCCGGCG CTGTACGAGTGGCGCGCGTACCGGGACCTGTTCCGGGTCGTGCAGGGCGAGGGGCTCAAG CTGCAGGCCATCATGTCGTTCCACGCGTGCGGCGGCAACGTCGGCGACGACGCCGTCAGC ATCCCGCTCCCGCGGTGGGTGCGGGAGGTCGGCGAGGCCGACCCCGACGTGTTCTACACG AGCTCCAGCGGGGCGCGGAACCAGGAGTGCCTCTCCATTGGCGTCGACGACGAGCCGCTG TTCCATGGCAGGACTGCCATCCAGTTGTATGCCGATTTCATGAAGAGCTTCAGGGAGAAC ATGGCGGACTTCCTGGACTCCGGCCTGATCGTGGACATCGAAGTCGGGCTTGGCCCTGCG GGGGAGCTGAGGTACCCGTCGTATCCGGAGACGCAGGGGTGGGTGTTCCCCGGCATCGGA CAGTTCCAGTGTTACGACAAGTACCTGGAGGCGGATTTCAAGGCGGCGGCGGCGGAGGCC GGGCACCCAGACTGGGAGCTACCAGACGACGCCGGGGAGATCAACGACACGCCGGAGGAC ACTGGGTTCTTCGCGGCGGAGCGAGGGACCTACCTCACCGAGCAGGGGAGGTTCTTCCTG ACATGGTACTCCCGCAAGCTGATCCAGCACGGAGACAGGGTCTTGGACGAAGCCAACAAG GCCTTCCTGGGGTGCAAGGTCAAGCTCGCCGCAAAAGTGTCCGGGATACACTGGTGGTAC AGGCACCCGAGCCACGCCGCGGAGCTGACCTCGGGGTACTACAACCTCGGCGGCCGGGAC GGGTACGCGCCGATCGCGCGCATGCTGGCGCGGCACGACGGCGCCGTCCTCAACTTCACC TGCGCGGAGATGCGGAACTCGGAGCAGGCCGAGGAGGCCCTGAGCGCCCCGGAGCAGCTC GTCCAGCAGGTGCTGAGCGCCGGGTGGAGGGAGGGGGTCGAGGTGGCGTGCGAGAACGCG CTGAGCCGGTACGACCGCCGCGGGTACAACCAGATGCTGCTCAACGCGCGGCCCAACGGC GTGGGTCTCTCCGGCGCCGGCGCCGGCGCCGCGCGGCGCAGGGTCGCGGCGGTGACGTTC CTCCGGCTCTCGGACGAGCTCCTGGCGAGCAACAACTTCCGGATCTTCCGGACCTTCGTC CGGAAAATGCACGCCGACCTGGATTACTGCCCTGATGCGGACCGGTACGGTCGGCCCCTC AAGCCCCTAGAGCGGTCCGCGCCAGAGATGCCCATGGAGCGGCTGCTGGAAGCCACCGCG CCGGCGCCGGCGTTCCCGTTTGATCCGGAGACCGACATGAGCGTCGGCGGCGGGCTCGCA GAGGCTGTCGACTGGGTGCTCGACAAGATCGCGTGGCTATTTGGATAG

Peptide Sequence

PEP ID	Zm00001d006539_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:210700847:210703733:1 gene:Zm00001d006539 transcript:Zm00001d006539_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase
Sequence	MLTASPSSQVKPQQWGTCGVSVASTPALLPPPAAGRLVAVDTRRRTRTVASAALGPVATE PAERSPVPQPPPLSSDEETVLRLGNYVPVFVMLPLEVVTTENDLEDAGKLREQLRRLRGA GVDGVMVDVWWGAVEGAGPALYEWRAYRDLFRVVQGEGLKLQAIMSFHACGGNVGDDAVS IPLPRWVREVGEADPDVFYTSSSGARNQECLSIGVDDEPLFHGRTAIQLYADFMKSFREN MADFLDSGLIVDIEVGLGPAGELRYPSYPETQGWVFPGIGQFQCYDKYLEADFKAAAAEA GHPDWELPDDAGEINDTPEDTGFFAAERGTYLTEQGRFFLTWYSRKLIQHGDRVLDEANK AFLGCKVKLAAKVSGIHWWYRHPSHAAELTSGYYNLGGRDGYAPIARMLARHDGAVLNFT CAEMRNSEQAEEALSAPEQLVQQVLSAGWREGVEVACENALSRYDRRGYNQMLLNARPNG VGLSGAGAGAARRRVAAVTFLRLSDELLASNNFRIFRTFVRKMHADLDYCPDADRYGRPL KPLERSAPEMPMERLLEATAPAPAFPFDPETDMSVGGGLAEAVDWVLDKIAWLFG

Transcript Sequence

Transcript ID	Zm00001d006539_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:210700847:210703733:1 gene:Zm00001d006539 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-amylase
Sequence	GGCAGTTGAACATTTCAAGGACGAGACACAATTTCTCAGTACACCATGCTAACGGCCTCG CCGTCGTCTCAGGTGAAGCCGCAACAATGGGGTACATGCGGGGTCAGCGTGGCATCGACG CCGGCGCTTCTTCCGCCACCGGCCGCCGGACGGCTTGTCGCCGTCGATACCAGGAGGAGG ACGAGGACGGTTGCCTCCGCCGCGCTTGGTCCTGTGGCCACCGAGCCCGCAGAAAGGTCT CCCGTGCCACAGCCCCCGCCACTGTCCAGCGACGAGGAGACGGTGCTCCGGCTCGGCAAC TACGTCCCGGTCTTCGTCATGCTCCCACTTGAAGTGGTGACCACCGAGAACGACCTGGAG GACGCGGGGAAGCTGCGGGAGCAGCTGCGGCGGCTGCGGGGGGCCGGCGTCGACGGCGTG ATGGTGGACGTGTGGTGGGGCGCCGTGGAGGGCGCCGGGCCGGCGCTGTACGAGTGGCGC GCGTACCGGGACCTGTTCCGGGTCGTGCAGGGCGAGGGGCTCAAGCTGCAGGCCATCATG TCGTTCCACGCGTGCGGCGGCAACGTCGGCGACGACGCCGTCAGCATCCCGCTCCCGCGG TGGGTGCGGGAGGTCGGCGAGGCCGACCCCGACGTGTTCTACACGAGCTCCAGCGGGGCG CGGAACCAGGAGTGCCTCTCCATTGGCGTCGACGACGAGCCGCTGTTCCATGGCAGGACT GCCATCCAGTTGTATGCCGATTTCATGAAGAGCTTCAGGGAGAACATGGCGGACTTCCTG GACTCCGGCCTGATCGTGGACATCGAAGTCGGGCTTGGCCCTGCGGGGGAGCTGAGGTAC CCGTCGTATCCGGAGACGCAGGGGTGGGTGTTCCCCGGCATCGGACAGTTCCAGTGTTAC GACAAGTACCTGGAGGCGGATTTCAAGGCGGCGGCGGCGGAGGCCGGGCACCCAGACTGG GAGCTACCAGACGACGCCGGGGAGATCAACGACACGCCGGAGGACACTGGGTTCTTCGCG GCGGAGCGAGGGACCTACCTCACCGAGCAGGGGAGGTTCTTCCTGACATGGTACTCCCGC AAGCTGATCCAGCACGGAGACAGGGTCTTGGACGAAGCCAACAAGGCCTTCCTGGGGTGC AAGGTCAAGCTCGCCGCAAAAGTGTCCGGGATACACTGGTGGTACAGGCACCCGAGCCAC GCCGCGGAGCTGACCTCGGGGTACTACAACCTCGGCGGCCGGGACGGGTACGCGCCGATC GCGCGCATGCTGGCGCGGCACGACGGCGCCGTCCTCAACTTCACCTGCGCGGAGATGCGG AACTCGGAGCAGGCCGAGGAGGCCCTGAGCGCCCCGGAGCAGCTCGTCCAGCAGGTGCTG AGCGCCGGGTGGAGGGAGGGGGTCGAGGTGGCGTGCGAGAACGCGCTGAGCCGGTACGAC CGCCGCGGGTACAACCAGATGCTGCTCAACGCGCGGCCCAACGGCGTGGGTCTCTCCGGC GCCGGCGCCGGCGCCGCGCGGCGCAGGGTCGCGGCGGTGACGTTCCTCCGGCTCTCGGAC GAGCTCCTGGCGAGCAACAACTTCCGGATCTTCCGGACCTTCGTCCGGAAAATGCACGCC GACCTGGATTACTGCCCTGATGCGGACCGGTACGGTCGGCCCCTCAAGCCCCTAGAGCGG TCCGCGCCAGAGATGCCCATGGAGCGGCTGCTGGAAGCCACCGCGCCGGCGCCGGCGTTC CCGTTTGATCCGGAGACCGACATGAGCGTCGGCGGCGGGCTCGCAGAGGCTGTCGACTGG GTGCTCGACAAGATCGCGTGGCTATTTGGATAGGATCAGAATCAGATCACACTCAGGCGA TCAGCATTTCCGTTGGACACGAACCATTGATCCGCAACAGGAATGGCATGGCCAGTGATA CATGCAGTTGCGCTAGCAGCACCATGTCATGACACCGACATTGTACCTGTACACGCTTCT GCTTCGTCCTCCTTTTAGCGGAAGGCTATTTATGATATACTGATGAAATTTACAGCATCT TGGGTAAGATGTTTTAGATGTTGTTTGAATTTTCACGTATTCATGTTAATGTACGTGTAT TAGGGGTGGTTTCGTGTAGAGTTTAGTTTAAATTTCACGTAAATTTGGCTACCATATAGA TTGAGGTGGATACATGTCCTGAGCCAGGCTTACCGAAGAAATCGATGGTCTGTCCTACGA ATTTTTTTCCCAGAAGCTTTATGTAAAAGGAATTAGTTAAATATATTTAAGAGTTGTGTC GTC