Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006525_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:210497851:210499212:-1 gene:Zm00001d006525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	ATGTCGTCGTCGACCTCACAAATGGCGTCGCTCGCCGTGCTCGTCTTCCTGGTGGTCTGC GCAACGCTTGCGTCCGGTGCCGCCAGCGTCCGCGTTGGGCTCACGCGCATCCACTCCGAC CCGGACACCACCGCGCCCCAGTTCGTGCGCGACGCGCTGCGCCGCGACATGCACCGGCAG CGGTCCCGATCGTTCGGCCGCGACCGCGACCGCGAGCTCGCGGAGTCCGACGGGCGCACC ACGGTGTCCGCGCGCACCCGCAAGGACCTGCCCAACGGCGGGGAGTACCTCATGACGCTG GCCATCGGCACGCCGCCGCTGCCGTACGCGGCCGTCGCCGACACGGGCAGCGACCTCATC TGGACGCAGTGCGCGCCCTGCGGCACCCAGTGCTTCGAGCAGCCGGCGCCGCTGTACAAC CCAGCGAGCTCGACCACGTTCAGCGTGCTCCCGTGCAACAGCTCCCTGAGCATGTGCGCG GGGGCGCTGGCGGGGGCCGCGCCGCCGCCCGGGTGCGCCTGCATGTACAACCAGACGTAC GGCACCGGGTGGACGGCGGGCGTGCAGGGCTCCGAGACCTTCACCTTCGGCTCGTCCGCC GCCGACCAGGCCCGCGTCCCCGGCGTCGCCTTCGGCTGCAGCAACGCCAGCAGCAGCGAC TGGAACGGCTCGGCGGGGCTGGTGGGGCTGGGCAGGGGCAGCCTGTCGCTCGTCTCGCAG CTCGGCGCCGGCAGGTTCTCCTACTGCCTGACGCCGTTCCAGGACACCAACAGCACCAGC ACCCTCCTCCTCGGCCCGTCGGCGGCGCTCAACGGCACCGGCGTCCGCTCCACGCCGTTC GTCGCTAGCCCGGCCAGGGCGCCCATGAGCACCTACTACTACCTCAACCTGACGGGCATA TCCCTGGGCGCGAAGGCGCTGCCCATCTCTCCCGGCGCATTCTCCCTCAAGCCCGACGGC ACGGGCGGCCTCATCATCGACTCCGGCACGACCATCACCTCGCTGGCCAACGCGGCGTAC CAGCAGGTCCGCGCCGCGGTAAAGTCCCTGGTCACGACGCTGCCAACGGTCGACGGGTCG GACTCCACGGGGCTCGACCTGTGCTTCGCGCTGCCGGCCCCGACGTCGGCGCCGCCGGCC GTGCTGCCGAGCATGACGCTCCACTTCGACGGCGCCGACATGGTGCTCCCCGCGGACAGC TACATGATCTCGGGGTCCGGCGTGTGGTGCCTGGCCATGCGGAACCAGACGGACGGCGCG ATGAGCACGTTCGGGAACTACCAGCAGCAGAACATGCACATCCTCTACGACGTCCGGGAG GAGACGCTGTCGTTCGCTCCGGCCAAGTGCAGCACTCTTTGA

Peptide Sequence

PEP ID	Zm00001d006525_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:210497851:210499212:-1 gene:Zm00001d006525 transcript:Zm00001d006525_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	MSSSTSQMASLAVLVFLVVCATLASGAASVRVGLTRIHSDPDTTAPQFVRDALRRDMHRQ RSRSFGRDRDRELAESDGRTTVSARTRKDLPNGGEYLMTLAIGTPPLPYAAVADTGSDLI WTQCAPCGTQCFEQPAPLYNPASSTTFSVLPCNSSLSMCAGALAGAAPPPGCACMYNQTY GTGWTAGVQGSETFTFGSSAADQARVPGVAFGCSNASSSDWNGSAGLVGLGRGSLSLVSQ LGAGRFSYCLTPFQDTNSTSTLLLGPSAALNGTGVRSTPFVASPARAPMSTYYYLNLTGI SLGAKALPISPGAFSLKPDGTGGLIIDSGTTITSLANAAYQQVRAAVKSLVTTLPTVDGS DSTGLDLCFALPAPTSAPPAVLPSMTLHFDGADMVLPADSYMISGSGVWCLAMRNQTDGA MSTFGNYQQQNMHILYDVREETLSFAPAKCSTL

Transcript Sequence

Transcript ID	Zm00001d006525_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:210497851:210499212:-1 gene:Zm00001d006525 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase nepenthesin-1
Sequence	ATGTCGTCGTCGACCTCACAAATGGCGTCGCTCGCCGTGCTCGTCTTCCTGGTGGTCTGC GCAACGCTTGCGTCCGGTGCCGCCAGCGTCCGCGTTGGGCTCACGCGCATCCACTCCGAC CCGGACACCACCGCGCCCCAGTTCGTGCGCGACGCGCTGCGCCGCGACATGCACCGGCAG CGGTCCCGATCGTTCGGCCGCGACCGCGACCGCGAGCTCGCGGAGTCCGACGGGCGCACC ACGGTGTCCGCGCGCACCCGCAAGGACCTGCCCAACGGCGGGGAGTACCTCATGACGCTG GCCATCGGCACGCCGCCGCTGCCGTACGCGGCCGTCGCCGACACGGGCAGCGACCTCATC TGGACGCAGTGCGCGCCCTGCGGCACCCAGTGCTTCGAGCAGCCGGCGCCGCTGTACAAC CCAGCGAGCTCGACCACGTTCAGCGTGCTCCCGTGCAACAGCTCCCTGAGCATGTGCGCG GGGGCGCTGGCGGGGGCCGCGCCGCCGCCCGGGTGCGCCTGCATGTACAACCAGACGTAC GGCACCGGGTGGACGGCGGGCGTGCAGGGCTCCGAGACCTTCACCTTCGGCTCGTCCGCC GCCGACCAGGCCCGCGTCCCCGGCGTCGCCTTCGGCTGCAGCAACGCCAGCAGCAGCGAC TGGAACGGCTCGGCGGGGCTGGTGGGGCTGGGCAGGGGCAGCCTGTCGCTCGTCTCGCAG CTCGGCGCCGGCAGGTTCTCCTACTGCCTGACGCCGTTCCAGGACACCAACAGCACCAGC ACCCTCCTCCTCGGCCCGTCGGCGGCGCTCAACGGCACCGGCGTCCGCTCCACGCCGTTC GTCGCTAGCCCGGCCAGGGCGCCCATGAGCACCTACTACTACCTCAACCTGACGGGCATA TCCCTGGGCGCGAAGGCGCTGCCCATCTCTCCCGGCGCATTCTCCCTCAAGCCCGACGGC ACGGGCGGCCTCATCATCGACTCCGGCACGACCATCACCTCGCTGGCCAACGCGGCGTAC CAGCAGGTCCGCGCCGCGGTAAAGTCCCTGGTCACGACGCTGCCAACGGTCGACGGGTCG GACTCCACGGGGCTCGACCTGTGCTTCGCGCTGCCGGCCCCGACGTCGGCGCCGCCGGCC GTGCTGCCGAGCATGACGCTCCACTTCGACGGCGCCGACATGGTGCTCCCCGCGGACAGC TACATGATCTCGGGGTCCGGCGTGTGGTGCCTGGCCATGCGGAACCAGACGGACGGCGCG ATGAGCACGTTCGGGAACTACCAGCAGCAGAACATGCACATCCTCTACGACGTCCGGGAG GAGACGCTGTCGTTCGCTCCGGCCAAGTGCAGCACTCTTTGA