Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006481_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:2:209648854:209654484:1 gene:Zm00001d006481 gene_biotype:protein_coding transcript_biotype:protein_coding description:BNR/Asp-box repeat family protein
Sequence

ATGTACAACATGAACACCAGTTCGATCAATGCAGCTTCCAGTTGGAGCATTATGAAGGAG
GAGTTCACATTTCAAGCACATGATCGCCCTTTCAATAATTGTCATGCTTCCACCATTGTA
GAGGTTGAGAAAGAAATTTTTTTGGTTTCATATTTTGGTGGATCCATAGAAGGGGCTCCT
GATGTCAAAATCTGGACACAGAGATACAGTGATGGCTATTGGCATCCTCCAGTAGTAGCT
GATGAAGAAAATGCGACAGCAATGTGGAATCCTGTTTTATTTCAGCTCCCCTCTCATGAG
TTGCTTCTCTTCTACAAGATTGGTGAACACCCTCAAAACTGGAGCGGTGCCATGAAAAGA
TCTCTCAATGGTGGTATGTCCTGGTTAGAGAGGGAGCAATTACCACCTGGTATTCTTGGC
CCTATTAAGAATAAGCCCTTTTTGCTTGATGATGGCCGTTTACTATGTGGGACATCTGTT
GAAAGTTGGAACTCTTGGGGTGCATGGCTTGAGGTAACAGAAGATGCTGGCCGGACATGG
AGCAAATATGGTCCTATATTTATCCAAGGCGAGAAACTTGGTGTCATTCAGCCAGTACCT
TATCAGACCACCAATGGGAGTATACGTATGTTGCTGAGGTCTCACCAAACAATCGGTTCG
GTATGCATGGCTGATTCCTACGATGGAGGATTAAGATGGAGTTTTGCGCGCAAGAGTGTG
CTTCCAAACCCTAATTCAGGGATCGATGGAATCAAGATGAAAGATGGGAGAGTGGCACTT
GCCTACAACACCGTCTCCAGAGGCACGCTCAAAGTGGCCGTCTCCACAGACGACGGCCTC
TCATGGCAAGAGGTGGTGACGCTGGAGAACGCGGAAGGCTGGGAGTTCTCGTATCCTGCA
GTGATCCAAACCCAGGGCCGGCCCTGA

Peptide Sequence

PEP ID

Zm00001d006481_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:2:209648854:209654484:1 gene:Zm00001d006481 transcript:Zm00001d006481_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:BNR/Asp-box repeat family protein
Sequence

MYNMNTSSINAASSWSIMKEEFTFQAHDRPFNNCHASTIVEVEKEIFLVSYFGGSIEGAP
DVKIWTQRYSDGYWHPPVVADEENATAMWNPVLFQLPSHELLLFYKIGEHPQNWSGAMKR
SLNGGMSWLEREQLPPGILGPIKNKPFLLDDGRLLCGTSVESWNSWGAWLEVTEDAGRTW
SKYGPIFIQGEKLGVIQPVPYQTTNGSIRMLLRSHQTIGSVCMADSYDGGLRWSFARKSV
LPNPNSGIDGIKMKDGRVALAYNTVSRGTLKVAVSTDDGLSWQEVVTLENAEGWEFSYPA
VIQTQGRP

Transcript Sequence

Transcript ID

Zm00001d006481_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:209648854:209654484:1 gene:Zm00001d006481 gene_biotype:protein_coding transcript_biotype:protein_coding description:BNR/Asp-box repeat family protein
Sequence

GCGGCGGCAGCGGACAGAGCCAGATGCGGTCAGGGTCAATCTCTCCTTGAGCTCTCCTCT
CCACCGCGCTGAGACCAGCCTTTCGGCCCTTGCACGCCGCACACGCCAGTCCAGGTCTCA
CCGTCGGGCTGCTTCACCGGTGCCTAATAGCGATGCCCACCACCATCTGCAGTTTGAGCA
AGCAACATAAATGGAAGATAGCAGTCTCTGTGATGCTGTTCTCCGTGCTCCTAATAGCAT
GTGATTCGCCATTCAGGGCCTTTTTTAGCAAGTACCTCAGCTCCATTGTACCATCATCTG
GATCATCACATGACACTGCACTAACCCAGGAGTAAGAATGAACTGGCGCCCCCGTGTAGC
CTTAGGAGTGATTAAGTAGTACTGTTAAGATCAAAATTTGCTACCTTGAAACAGGAATCG
ACATTTATACTCAGAGGTCAGAGCATGCCACTAACCTGACTAACAGCAAGGCAGCGAAAC
AGATCGAACATGGCATGTACAACATGAACACCAGTTCGATCAATGCAGCTTCCAGTTGGA
GCATTATGAAGGAGGAGTTCACATTTCAAGCACATGATCGCCCTTTCAATAATTGTCATG
CTTCCACCATTGTAGAGGTTGAGAAAGAAATTTTTTTGGTTTCATATTTTGGTGGATCCA
TAGAAGGGGCTCCTGATGTCAAAATCTGGACACAGAGATACAGTGATGGCTATTGGCATC
CTCCAGTAGTAGCTGATGAAGAAAATGCGACAGCAATGTGGAATCCTGTTTTATTTCAGC
TCCCCTCTCATGAGTTGCTTCTCTTCTACAAGATTGGTGAACACCCTCAAAACTGGAGCG
GTGCCATGAAAAGATCTCTCAATGGTGGTATGTCCTGGTTAGAGAGGGAGCAATTACCAC
CTGGTATTCTTGGCCCTATTAAGAATAAGCCCTTTTTGCTTGATGATGGCCGTTTACTAT
GTGGGACATCTGTTGAAAGTTGGAACTCTTGGGGTGCATGGCTTGAGGTAACAGAAGATG
CTGGCCGGACATGGAGCAAATATGGTCCTATATTTATCCAAGGCGAGAAACTTGGTGTCA
TTCAGCCAGTACCTTATCAGACCACCAATGGGAGTATACGTATGTTGCTGAGGTCTCACC
AAACAATCGGTTCGGTATGCATGGCTGATTCCTACGATGGAGGATTAAGATGGAGTTTTG
CGCGCAAGAGTGTGCTTCCAAACCCTAATTCAGGGATCGATGGAATCAAGATGAAAGATG
GGAGAGTGGCACTTGCCTACAACACCGTCTCCAGAGGCACGCTCAAAGTGGCCGTCTCCA
CAGACGACGGCCTCTCATGGCAAGAGGTGGTGACGCTGGAGAACGCGGAAGGCTGGGAGT
TCTCGTATCCTGCAGTGATCCAAACCCAGGGCCGGCCCTGAGGGTATGCAGGATATACGA
CCGCTCAGGACCCTCAAGGTTTATAGGGCCCCCGTTTATTCAACTTATATCCAAATACAT
ATACATTACAGATAAATCTATATTCTCGTTCTTTTGTTGTGTCTCTTTAATTTTCTGGCA
ATCATCTCTTCGAGGTCGCGCAAC