Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006479_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:2:209563875:209567777:-1 gene:Zm00001d006479 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase3 description: calcium dependent protein kinase3
Sequence	ATGGGGCAGTGTTGTAGCAGAGCTCCCGCCCCGGACTCTGGACGGGGAGGCACCAATGGT TATGGCTATTCTAACCAGGCAAAGCCAGCGCAAACACCTTCGAGTTACAACCCTCCTCAG CAGCCGGCCGAGGTGAGGTACACGCCGCCGGCGACGAACCCTCCGGTAGTCCCACCTGTG CCTGTGCCACCGAAGCCCACGGCGGACACGATTCTTGGCAAACAGTACGAGGACGTGCGC TCTGTCTACTCCCTCGGAAAGGAGCTTGGCCGGGGCCAGTTCGGGGTGACATACCTCTGC ACAGAGGTTGCCTCTGGTAAGCAGTACGCCTGCAAGTCCATCTCCAAGCGCAAGCTTACC AGCAAGGCAGACAGGGAGGACATTCGAAGAGAGATCCAGATCATGCAGCATCTGTCTGGA CAGCCAAACATTGTTGAGTTCCGGGGAGCATACGAGGACAAGAGCAATGTCCATGTGGTG ATGGAGCTCTGCGCAGGTGGGGAGCTCTTCGATCGCATCATTGCCAAGGGGCACTACACA GAGCGTGCAGCTGCTACAATCTGCAGAGCAGTTGTGAATGTTGTCAACATTTGCCACTTC ATGGGTGTGATGCACCGTGACCTGAAACCGGAGAACTTCTTGCTTGCGAGCAAGGAGGAG AATGCAATGCTCAAGGCCACTGATTTTGGGCTTTCCGTCTTCATCGAAGAAGGAAAGATG TACAGGGACATCGTTGGAAGTGCTTATTATGTTGCGCCTGAAGTCCTTAAGCGGAGCTAT GGAAAAGAGATAGATGTTTGGAGCGCAGGTGTTATTTTGTACATTCTTCTCAGTGGTGTG CCTCCATTTTGGGCTGAAACTGAAAAGGGGATATTTGATGCTATTCTGCATGAGGAGATT GACTTTGAAAGTCAACCTTGGCCATCAATTTCTGAGAGTGCTAAAGACTTGGTTAGAAAG ATGTTGACACGAGATCCAAAGAAAAGACTGACTTCAGCTCAAGTTCTTCAACATTCATGG CTCAGAGAAGGTGGAGGTGCATCTGATAAGCCTATCGACAGTGCTGTTCTTTCTAGAATG AAGCAGTTCAGAGCAATGAATAAGCTGAAAAAGATGGCCCTAAAGGTTATTGCCTCAAAC CTTAACGAGGAAGAGATCAAGGGGCTAAAGCAAATGTTCATGAACATGGACACAGACAAT AGTGGCACAATCACGTATGAAGAACTCAAAGCAGGACTAGCCAAACTTGGATCAAAGCTG TCGGAAGCTGAAGTAAAGCAGTTGATGGAGGCTGCTGATGTTGATGGGAATGGATCCATC GACTATGTTGAGTTCATCACTGCCACAATGCATAGACACAAGCTCGAAAGAGACGAGTAT TTGTTTAAGGCATTCCAGTACTTCGATAAAGATAACAGCGGTTTCATCACAAGAGATGAG CTGGAGTCTGCTTTGATCGAGCATGAGATGGGTGACACGAGTACAATAAAGGAGATCATA TCAGAAGTGGACACAGACAATGATGGGAGGATTAACTATGAGGAGTTCTGCGCAATGATG AGAGGAGGGATGCAGCAGCCAATGAGGCTCAAGTAG

Peptide Sequence

PEP ID	Zm00001d006479_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:2:209563875:209567777:-1 gene:Zm00001d006479 transcript:Zm00001d006479_T006 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase3 description: calcium dependent protein kinase3
Sequence	MGQCCSRAPAPDSGRGGTNGYGYSNQAKPAQTPSSYNPPQQPAEVRYTPPATNPPVVPPV PVPPKPTADTILGKQYEDVRSVYSLGKELGRGQFGVTYLCTEVASGKQYACKSISKRKLT SKADREDIRREIQIMQHLSGQPNIVEFRGAYEDKSNVHVVMELCAGGELFDRIIAKGHYT ERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLASKEENAMLKATDFGLSVFIEEGKM YRDIVGSAYYVAPEVLKRSYGKEIDVWSAGVILYILLSGVPPFWAETEKGIFDAILHEEI DFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVLQHSWLREGGGASDKPIDSAVLSRM KQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKL SEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEYLFKAFQYFDKDNSGFITRDE LESALIEHEMGDTSTIKEIISEVDTDNDGRINYEEFCAMMRGGMQQPMRLK

Transcript Sequence

Transcript ID	Zm00001d006479_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:209563875:209567777:-1 gene:Zm00001d006479 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase3 description: calcium dependent protein kinase3
Sequence	TCTTGCTCCGTCCTCCCTCCAACTCCAAGATTTGTTTCGCACCCGATTCCTGAGCTTCCG CGGCGCTTCTTGCTGAAAAGAAAGCTCCGAGTTCTTCAGTTCTGGATCGATAGAGAGGCG GTTCCTTTGCGGGCTCTGAGGTTCAGCTCTCGCTCTTGATTTGTCTCATCGACGCATCAG TTGGGCTGCAGGCTTAGAGCTGGAAGGAATAATTTGACTAGAGAAATGGGGCAGTGTTGT AGCAGAGCTCCCGCCCCGGACTCTGGACGGGGAGGCACCAATGGTTATGGCTATTCTAAC CAGGCAAAGCCAGCGCAAACACCTTCGAGTTACAACCCTCCTCAGCAGCCGGCCGAGGTG AGGTACACGCCGCCGGCGACGAACCCTCCGGTAGTCCCACCTGTGCCTGTGCCACCGAAG CCCACGGCGGACACGATTCTTGGCAAACAGTACGAGGACGTGCGCTCTGTCTACTCCCTC GGAAAGGAGCTTGGCCGGGGCCAGTTCGGGGTGACATACCTCTGCACAGAGGTTGCCTCT GGTAAGCAGTACGCCTGCAAGTCCATCTCCAAGCGCAAGCTTACCAGCAAGGCAGACAGG GAGGACATTCGAAGAGAGATCCAGATCATGCAGCATCTGTCTGGACAGCCAAACATTGTT GAGTTCCGGGGAGCATACGAGGACAAGAGCAATGTCCATGTGGTGATGGAGCTCTGCGCA GGTGGGGAGCTCTTCGATCGCATCATTGCCAAGGGGCACTACACAGAGCGTGCAGCTGCT ACAATCTGCAGAGCAGTTGTGAATGTTGTCAACATTTGCCACTTCATGGGTGTGATGCAC CGTGACCTGAAACCGGAGAACTTCTTGCTTGCGAGCAAGGAGGAGAATGCAATGCTCAAG GCCACTGATTTTGGGCTTTCCGTCTTCATCGAAGAAGGAAAGATGTACAGGGACATCGTT GGAAGTGCTTATTATGTTGCGCCTGAAGTCCTTAAGCGGAGCTATGGAAAAGAGATAGAT GTTTGGAGCGCAGGTGTTATTTTGTACATTCTTCTCAGTGGTGTGCCTCCATTTTGGGCT GAAACTGAAAAGGGGATATTTGATGCTATTCTGCATGAGGAGATTGACTTTGAAAGTCAA CCTTGGCCATCAATTTCTGAGAGTGCTAAAGACTTGGTTAGAAAGATGTTGACACGAGAT CCAAAGAAAAGACTGACTTCAGCTCAAGTTCTTCAACATTCATGGCTCAGAGAAGGTGGA GGTGCATCTGATAAGCCTATCGACAGTGCTGTTCTTTCTAGAATGAAGCAGTTCAGAGCA ATGAATAAGCTGAAAAAGATGGCCCTAAAGGTTATTGCCTCAAACCTTAACGAGGAAGAG ATCAAGGGGCTAAAGCAAATGTTCATGAACATGGACACAGACAATAGTGGCACAATCACG TATGAAGAACTCAAAGCAGGACTAGCCAAACTTGGATCAAAGCTGTCGGAAGCTGAAGTA AAGCAGTTGATGGAGGCTGCTGATGTTGATGGGAATGGATCCATCGACTATGTTGAGTTC ATCACTGCCACAATGCATAGACACAAGCTCGAAAGAGACGAGTATTTGTTTAAGGCATTC CAGTACTTCGATAAAGATAACAGCGGTTTCATCACAAGAGATGAGCTGGAGTCTGCTTTG ATCGAGCATGAGATGGGTGACACGAGTACAATAAAGGAGATCATATCAGAAGTGGACACA GACAATGATGGGAGGATTAACTATGAGGAGTTCTGCGCAATGATGAGAGGAGGGATGCAG CAGCCAATGAGGCTCAAGTAGCCTGTTCCCTTAGTAGAAATGGTGTACCGTTAGTTACTG TTCTTCACTCTTTTTCCCCCTTCGTATTTGGTACTCTTGGTAGCCGGATTAAGCTTACAA TGGGCGTCGCTCTTTTGCATTGTCAAGAGATGATTGTGTATATCTTTTTCTTTTGCTCGT GTTTGTTGCATTGTAGTATCCTGAACGTCCCTTCCTTTTGTAAGTTTGTTTATACACAAG CACATCCAATAGAAAGTGCAATTTGT