Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006476_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:2:209512508:209518574:1 gene:Zm00001d006476 gene_biotype:protein_coding transcript_biotype:protein_coding description: aconitase5
Sequence	ATGCACAGAGCGGCCGCCTCACCGCTCCGACACAGCCTCCGCCGCCTCTCCTCCTGCTCC GCGGCTACCCCTCTCGTTTGGGCTGCCCGCTTCTTCGTGCCCTGCTCCGAGAGTCGTCTC CCCGCGTTCACCTCGTCTCGCTTCCTCCGGTCGGCGGCGGCTGCGCCGTGCCGGTGTTGC TCAGGCGCTGCGATCACCGAGCGGCCTGCGTCTGCGTGGCGCGGAGTCGCCACCATGGCC GATGGTAGTAGCCGCTTCGGGCATGTCCTCACAAGCCTCCCAAAGCCCGGTGGTGGAGAG TACGGGAAGTACTATAGCTTACCAGCCCTGAATGATCGTAGGATAGAAAGATTGCCATAC TCTATCCGGTATCTACTGGAGTCAGCCATCCGCAACTGTGACGGTTTTCAGATTACAGAG AAGGATGTCGAAAATATCATTGACTGGGAGAATACCGCTCCCAAGCTAGTGGAGATACCC TTCAAGCCTGCCCGTGTGCTTCTGCAGGATTTTACCGGTGTCCCAGCTATCGTTGATCTT GCAAGCATGCGTGATGCTATGGCCCGACTGGGTGATGATCCTGGAAAGATTGATCCCCTG ATTCCAGTGGATCTAGTCATTGATCATTCGGTACAAGCTGATGTGGTAAGATCAGAGAAT GCCCTCCAAGCTAATATGCAGCGCGAATTCGATAGGAACAAGGAGCGCTTCGCTTTCCTT CGGTGGGGCTCTGTGGCATTCAATAATATGCTTATTGTTCCACCAGGTTCAGGAATTGTT CATCAGGTGAATCTTGAATATCTTGGACGAGTTGTTTTCAATACCGATGGCATTTTATAT CTTGATAGCGTGCTGGGAACAGATTCTCACACTACTATGATTGATGGAATGGGGGTTGCA GGCTGGGGTGTTGGGGGAATTGAAGCAGAAGCAACAATGCTTGGTCAGCCAATGAGCATG GTCTTGCCCAGTGTAGTTGGATTTAAACTGTCAGGGAAATTGCGTGATGGTGTTACTGCA ACCGATCTAGTATTGACAGTGACACATATTCTTAGGAAGCATGGTGTTGTTGGCAAATTT GTTGAGTTTTATGGCGAGGGAATGAGTGAGTTAGCAGTTGCTAACAGGGCAACAATTGCT AACATGTCACCAGAATACGGTGCAACAATGGGCTTCTTCCCTGTTGATCATGTGACCCTT GGATACCTGAAGCTGACAGGGAGAAGTGATGAAAAGGTTGAGATGGTGGAGGCATATCTT CGAGCTAACAATATGTTTGTTGATTACAACGAGGTTAGCATCGTTGTCACTATCTCTGAT ACCAAAGGAAACATATGCCCGAAAAGACCTCATGACCATGTTGCTCTGAAAGATATGAAA TCAGACTGGCATTCCTGTCTCGGTAATAAAGTTGGTTTTAAGGGCTTTGGTGTACCTAAA GAGCAACATGATAAATTCGTCAAGTTCACCTTCCATGGACAACCTGCAGAGATTAGACAT GGTAGCATTGTGATTGCTGCCATAACAAGTTGCACAAACACATCAAATCCAAGTGTCATG CTTGGCGCTGGCCTTGTTGCAAAGAAGGCGTGTGAGCTTGGCCTTGAGGTTAATCCATGG ATTAAAACTAGTCTTGCGCCAGGATCCGGGGCAGTGACCAAATATCTGCTGAAAAGTGGC TTGCAAAAGTATTTAGATCATCTAGGTTTCAACTTAATTGGATATGGTTGCACAACATGC ATTGGTAACTCGGGCGAGCTTGATGAAGATGTTGCTAAGGCAGTTACCGACAACGATATC ATTGCGGCTGCAGTACTCTCCGGTAACAGGAACTTCGAAGGGCGAATTCATGCATTGGTT CGGGCCAATTATCTTGCCTCCCCTCCTCTGGTTGTGGCCTATGCCCTTGCTGGCACTGTT TATATTGATTTTGAGACGGAACCAATTGGGAAAGGAAAAGATGGAACGGATGTGTACTTT AAGGACATATGGCCATCAAATGAAGAAATTGCAGAGGTTGAGCAATCAAGTGTGCTGCCT GACATGTTCAGGAGCACCTATGAAGCAATCACGCAGGGCAACCCAATGTGGAACCAGCTG TCAGTTCCAAAGGCAGACCGCTTCCCATGGGACCCCAGTTCCACCTACATTCATGATCCT CCATTCTTCAAGGATATTACACCGACTCCGCCAGGTCCATGCAGCATAGAGAATGCCTAT TGCCTGCTGAAGTTTGGTGACAGCATCACGACCGACCACATCTCACCAGCTGGGAGCATC CCCAGGGACAGCCCTGCTGGCAAGTACCTGCTTGAGCGTGGTGTGCAGCCAAAGGATTTC AATTCTTATGGAAGCCGTCGGGGCAACGATGAAGTGATGGCACGAGGAACCTTTGCAAAT ATCAGGATTGTGAATAGGCTGTTAAATGGAGAAGTTGGACCGAAGACGATTCACGTCCCT ACAAACGAGAAGCTTTTCGTGTTCGATGCTGCAATGGTCAGTTCTTCACCAAGCTACGTT TCTACCAACATACTATTCAGCATTATATTAAGACAAAAAAGGCACTCGATTCGCCTTAGA TACAAAGCTGATGGGCATCACACCATAGTGTTGGCTGGAGAGGAATATGGCAGTGGAAAA ATTCGCAAGAATCTTTTGACAAAACCATGTCATCAGGGGGTCAAAGCAGTAATTGCCAAG AGTTTCGAGAGGATCCACCGCAGCAACCTTGTAGGAATGGGAGTGTTACCGCTGTGTTTC AAACCTGGTGAGGATGCTGATTCTCTGGGGCTCACCGGTCATGAGCGCTACACGATAAGG CTCCCTACCAATGTGAGCGAGATACAACCGGGCCAAGATGTCCAGGTGCTCAGTGACACT GGGAAGTCATTCACCTGCAAGCTCCGGATTGATACAATGGTGGAGCTGGCTTACTTCGAT CATGGCGGGATCCTTCACTACGTTTTGAGGAACCTGGTGAGGCAGCAACAGCAGTAA

Peptide Sequence

PEP ID	Zm00001d006476_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:2:209512508:209518574:1 gene:Zm00001d006476 transcript:Zm00001d006476_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description: aconitase5
Sequence	MHRAAASPLRHSLRRLSSCSAATPLVWAARFFVPCSESRLPAFTSSRFLRSAAAAPCRCC SGAAITERPASAWRGVATMADGSSRFGHVLTSLPKPGGGEYGKYYSLPALNDRRIERLPY SIRYLLESAIRNCDGFQITEKDVENIIDWENTAPKLVEIPFKPARVLLQDFTGVPAIVDL ASMRDAMARLGDDPGKIDPLIPVDLVIDHSVQADVVRSENALQANMQREFDRNKERFAFL RWGSVAFNNMLIVPPGSGIVHQVNLEYLGRVVFNTDGILYLDSVLGTDSHTTMIDGMGVA GWGVGGIEAEATMLGQPMSMVLPSVVGFKLSGKLRDGVTATDLVLTVTHILRKHGVVGKF VEFYGEGMSELAVANRATIANMSPEYGATMGFFPVDHVTLGYLKLTGRSDEKVEMVEAYL RANNMFVDYNEVSIVVTISDTKGNICPKRPHDHVALKDMKSDWHSCLGNKVGFKGFGVPK EQHDKFVKFTFHGQPAEIRHGSIVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVNPW IKTSLAPGSGAVTKYLLKSGLQKYLDHLGFNLIGYGCTTCIGNSGELDEDVAKAVTDNDI IAAAVLSGNRNFEGRIHALVRANYLASPPLVVAYALAGTVYIDFETEPIGKGKDGTDVYF KDIWPSNEEIAEVEQSSVLPDMFRSTYEAITQGNPMWNQLSVPKADRFPWDPSSTYIHDP PFFKDITPTPPGPCSIENAYCLLKFGDSITTDHISPAGSIPRDSPAGKYLLERGVQPKDF NSYGSRRGNDEVMARGTFANIRIVNRLLNGEVGPKTIHVPTNEKLFVFDAAMVSSSPSYV STNILFSIILRQKRHSIRLRYKADGHHTIVLAGEEYGSGKIRKNLLTKPCHQGVKAVIAK SFERIHRSNLVGMGVLPLCFKPGEDADSLGLTGHERYTIRLPTNVSEIQPGQDVQVLSDT GKSFTCKLRIDTMVELAYFDHGGILHYVLRNLVRQQQQ

Transcript Sequence

Transcript ID	Zm00001d006476_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:209512508:209518574:1 gene:Zm00001d006476 gene_biotype:protein_coding transcript_biotype:protein_coding description: aconitase5
Sequence	GGGGGCAGCTCGCAGCTCGCTCCCCCTCTTCTTTATCACTCGCCAATCGCCGCAGCGCAG CGAAGATGCACAGAGCGGCCGCCTCACCGCTCCGACACAGCCTCCGCCGCCTCTCCTCCT GCTCCGCGGCTACCCCTCTCGTTTGGGCTGCCCGCTTCTTCGTGCCCTGCTCCGAGAGTC GTCTCCCCGCGTTCACCTCGTCTCGCTTCCTCCGGTCGGCGGCGGCTGCGCCGTGCCGGT GTTGCTCAGGCGCTGCGATCACCGAGCGGCCTGCGTCTGCGTGGCGCGGAGTCGCCACCA TGGCCGATGGTAGTAGCCGCTTCGGGCATGTCCTCACAAGCCTCCCAAAGCCCGGTGGTG GAGAGTACGGGAAGTACTATAGCTTACCAGCCCTGAATGATCGTAGGATAGAAAGATTGC CATACTCTATCCGGTATCTACTGGAGTCAGCCATCCGCAACTGTGACGGTTTTCAGATTA CAGAGAAGGATGTCGAAAATATCATTGACTGGGAGAATACCGCTCCCAAGCTAGTGGAGA TACCCTTCAAGCCTGCCCGTGTGCTTCTGCAGGATTTTACCGGTGTCCCAGCTATCGTTG ATCTTGCAAGCATGCGTGATGCTATGGCCCGACTGGGTGATGATCCTGGAAAGATTGATC CCCTGATTCCAGTGGATCTAGTCATTGATCATTCGGTACAAGCTGATGTGGTAAGATCAG AGAATGCCCTCCAAGCTAATATGCAGCGCGAATTCGATAGGAACAAGGAGCGCTTCGCTT TCCTTCGGTGGGGCTCTGTGGCATTCAATAATATGCTTATTGTTCCACCAGGTTCAGGAA TTGTTCATCAGGTGAATCTTGAATATCTTGGACGAGTTGTTTTCAATACCGATGGCATTT TATATCTTGATAGCGTGCTGGGAACAGATTCTCACACTACTATGATTGATGGAATGGGGG TTGCAGGCTGGGGTGTTGGGGGAATTGAAGCAGAAGCAACAATGCTTGGTCAGCCAATGA GCATGGTCTTGCCCAGTGTAGTTGGATTTAAACTGTCAGGGAAATTGCGTGATGGTGTTA CTGCAACCGATCTAGTATTGACAGTGACACATATTCTTAGGAAGCATGGTGTTGTTGGCA AATTTGTTGAGTTTTATGGCGAGGGAATGAGTGAGTTAGCAGTTGCTAACAGGGCAACAA TTGCTAACATGTCACCAGAATACGGTGCAACAATGGGCTTCTTCCCTGTTGATCATGTGA CCCTTGGATACCTGAAGCTGACAGGGAGAAGTGATGAAAAGGTTGAGATGGTGGAGGCAT ATCTTCGAGCTAACAATATGTTTGTTGATTACAACGAGGTTAGCATCGTTGTCACTATCT CTGATACCAAAGGAAACATATGCCCGAAAAGACCTCATGACCATGTTGCTCTGAAAGATA TGAAATCAGACTGGCATTCCTGTCTCGGTAATAAAGTTGGTTTTAAGGGCTTTGGTGTAC CTAAAGAGCAACATGATAAATTCGTCAAGTTCACCTTCCATGGACAACCTGCAGAGATTA GACATGGTAGCATTGTGATTGCTGCCATAACAAGTTGCACAAACACATCAAATCCAAGTG TCATGCTTGGCGCTGGCCTTGTTGCAAAGAAGGCGTGTGAGCTTGGCCTTGAGGTTAATC CATGGATTAAAACTAGTCTTGCGCCAGGATCCGGGGCAGTGACCAAATATCTGCTGAAAA GTGGCTTGCAAAAGTATTTAGATCATCTAGGTTTCAACTTAATTGGATATGGTTGCACAA CATGCATTGGTAACTCGGGCGAGCTTGATGAAGATGTTGCTAAGGCAGTTACCGACAACG ATATCATTGCGGCTGCAGTACTCTCCGGTAACAGGAACTTCGAAGGGCGAATTCATGCAT TGGTTCGGGCCAATTATCTTGCCTCCCCTCCTCTGGTTGTGGCCTATGCCCTTGCTGGCA CTGTTTATATTGATTTTGAGACGGAACCAATTGGGAAAGGAAAAGATGGAACGGATGTGT ACTTTAAGGACATATGGCCATCAAATGAAGAAATTGCAGAGGTTGAGCAATCAAGTGTGC TGCCTGACATGTTCAGGAGCACCTATGAAGCAATCACGCAGGGCAACCCAATGTGGAACC AGCTGTCAGTTCCAAAGGCAGACCGCTTCCCATGGGACCCCAGTTCCACCTACATTCATG ATCCTCCATTCTTCAAGGATATTACACCGACTCCGCCAGGTCCATGCAGCATAGAGAATG CCTATTGCCTGCTGAAGTTTGGTGACAGCATCACGACCGACCACATCTCACCAGCTGGGA GCATCCCCAGGGACAGCCCTGCTGGCAAGTACCTGCTTGAGCGTGGTGTGCAGCCAAAGG ATTTCAATTCTTATGGAAGCCGTCGGGGCAACGATGAAGTGATGGCACGAGGAACCTTTG CAAATATCAGGATTGTGAATAGGCTGTTAAATGGAGAAGTTGGACCGAAGACGATTCACG TCCCTACAAACGAGAAGCTTTTCGTGTTCGATGCTGCAATGGTCAGTTCTTCACCAAGCT ACGTTTCTACCAACATACTATTCAGCATTATATTAAGACAAAAAAGGCACTCGATTCGCC TTAGATACAAAGCTGATGGGCATCACACCATAGTGTTGGCTGGAGAGGAATATGGCAGTG GAAAAATTCGCAAGAATCTTTTGACAAAACCATGTCATCAGGGGGTCAAAGCAGTAATTG CCAAGAGTTTCGAGAGGATCCACCGCAGCAACCTTGTAGGAATGGGAGTGTTACCGCTGT GTTTCAAACCTGGTGAGGATGCTGATTCTCTGGGGCTCACCGGTCATGAGCGCTACACGA TAAGGCTCCCTACCAATGTGAGCGAGATACAACCGGGCCAAGATGTCCAGGTGCTCAGTG ACACTGGGAAGTCATTCACCTGCAAGCTCCGGATTGATACAATGGTGGAGCTGGCTTACT TCGATCATGGCGGGATCCTTCACTACGTTTTGAGGAACCTGGTGAGGCAGCAACAGCAGT AAAACGCTAAAACCGCATGCAAACATGTGAATATCTTGTCTGTTTCGAAAAAGGCTATGA TAAGAATAAAATTGGACTCAAGAAGAAGCCGATGTAAATGTCCATGAGATGAGCTGTGGT GTTTTGTATAGTACCCTTTTTATGTGATAATAAAGGTGCATTTGTGTCATGTACGGGCAC AAGTATAGGCGCCGTCGTGACATCAGACGCGCAGCTGAGCGCGCTGCTCACGCTACACAG GATGGCGCCACCATTAGTGGCTGAGATTTCAAAATTTAAACAGCAGATTAGTTTCCATTT TTCCTAAATCAATAGTTTCCTTGCTATGCCTAAATTATAGGAGCAGATTAGTTTCCCTTT TTCCCCAAATCAATAGTTTCCTTTCTATTAGTTTCCCTTTTTACCCAAATCAATAGTTTC CCTTCTATGCCTAAAATATAGGAGCCATTAGTGGGGGCAATGGCCTATATAATGTAATCA GACTTGGAGGAATGGAATCAAGCAATCAGTTATC