Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006459_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:2:208858830:208874179:-1 gene:Zm00001d006459 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
Sequence	ATGGCGCATGCTGGTAGGAGCGGAACCGGCGCTCAAGCACAAGGTGCCCCGAGGCCGAGC AGTCATCAAGTTCCCTCAAAGACAAGTGCTGTGGCTGCAGGAGGTTCCTCAAGTGCACCT ACACCGACGAGTGCTGCTGCAAATGCAATGCCATCTTCAAGTGCTCAAGCTCCACCATCA GAAGGTCCTGACACCCTTGCTGACAAGAAACGGGCAGCGGGCGGTGGCTCTGTGTTTAAG CCACCCCCTCCCATGGTAGCTGTTGCTGTGGGTTCCATCGATGAAGATGAGAAGCCAGGA CCTACAGAGAATGACGCGACAAGCCTCTCTACGACAATTCGCAGTAACTCATTGCGACGC TACCGAGGAAGTGGTTCCGATGATAAAACATCTTTGAATGTCACTGATGAGGACGAAAGG GCCCCATCACCCAACCATCAGGATGAGCCCCACCGGCAAGAGGCCCACATCTCTAGAAGC TCTCAAGGTTCTCGTCCTCATGGCACTCCTCGTGGTTATGGTTACTATGATGATAGAGGA TCCCATGATAAACATGGTGATCGTGAGAGATCTGCATCCATTGGCTATAGTAATAGTGGA AGGCGAAGATACCATGATGATAGAGAATCTCATACTAGGCGCGCTGAGCGTGAGAGGTCT ACATCAAATGAATATACTAACAAGAGAAGTCGACATGAGCATAGCTCAAGAAGCTCAAGA ACATCTGCACGATCTGATTGGGATGATGGACGCTGGGAATGGGAAGATACACCTCGTCGA GATTATCGTGATAATCGTCCTGGCTCCCGGAGACAACATCCAACACGATCTCCTATGCTC GCTGCTGCATCCCCGGATGCACGCCTGGTATCTCCTTGGTTAGACGGGAATACACCACGT CTAGCAGCGTCCCCGTGGGATAATGTATCCCCTTCACCTGCTCCAATACGTGCTTCTGGT TCCTCAAAAGGGTCTTCTTATTCACATTCCAGTGGAAGATCACACCAGCTTACCTTTTCA TCAACTACTAGTTCTAATATTATTGATGCTGATAGAAGCCCCTCAAATCCTGATAGGAAC AGTGAGATAACCGAGGAAATGATGCAGGAGATGGACTACAATGCTGACCGTGCATGGTAT GACTGCGAAGAACACACTACCATGTTTGATGGTGATCATTCTATGTATCTTGGAGATGAT AATTCCTACAAAAAGAGGGAAGCAGAGATGCCGAAGAAGCTGACTCGTAGAGATGGTAGC CTGATGACCCTTGCTCAAAGCAAAAAGATGTCACAGATGACTGCTGATAATGCTCAGTGG GAGGATAGACAATTGTTGAGATCTGGAGCTGTTAAAGGAACAGAAGTGCAAACTGAATTT GATGATGAGGAGGAACGGAAAGTAATACTTCTTGTTCATGACACAAAGCCCCCCTTCCTG GATGGGAGAGTTGTTTTCACAAAACAAGCAGAACCTGTAATGCCTCTGAAGGACCCAACA TCTGATATGGCTATTATTGCACGCAAAGGTTCTAGTCTGGTTAGGGAAATCCGTGAAAAG CAAAGCATGAACAAATCAAGGCAACGATTTTGGGAGCTTGCTGGATCTAAGCTTGGCAAT ATCTTGGGTGTTGAGAAAACAGCTGAACAGGTTGATGCAGATACTGCTGTTGTTGGTGAC CAAGGTGAGATTAATTTTAAAGAAGAAGCAAAGTTTTCACAACATTTGAAGGATAAAGCA GAAGCTGTCAGTGATTTTGCAAAATCAAAATCCCTTTCTCAACAAAGGCAATATCTTCCC ATATTTACCGTCCGGGATGATCTGCTACAGGTTGTGCGTGAAAATCAAGTGGTTGTGGTT GTTGGTGAAACTGGTTCTGGGAAGACTACTCAACTGACTCAGTATCTGCATGAGGATGGA TATACTACCACAGGAGTTGTTGGTTGTACCCAACCAAGGCGTGTGGCTGCCATGAGTGTT GCTAAGCGAGTCAGCGAGGAAATGGAGACTGATCTGGGAGATAAAGTCGGATATGCCATA CGGTTTGAGGATGTCACTGGTCCAAACACTATAATAAAGTATATGACAGATGGAGTGCTT CTCCGTGAAACCTTGAAAGATGCTGACCTCGACAAATATCGTGTTGTTGTCATGGATGAA GCACATGAAAGATCACTCAACACTGATGTTTTGTTTGGTATACTGAAGAAGGTTGTTGCA CGTAGACGGGATTTTAAACTAATCGTTACATCTGCAACCCTAAATGCTGACAAGTTCTCC AAGTTCTTCGGAGGTGTGCCTGTATTCCATATTCCGGGTCGGACTTTCCCAGTTAACATT ATGTTCAGCAAAACACCATGTGAGGACTATGTGGAAGCTGCAGTGAAGCAGGCCATGACT ATCCACATAACCAGCGGCCTTGGTGATATCCTAATCTTCATGACTGGGCAGGAAGAAATT GAGGCTACCTGCTATGCGCTTGCTGAACGCATGGAACAGTTAATATCGTCATCCACCAAG ACTATCCCCAAGCTAGAGATTCTGCCCATCTACTCACAGTTGCCTGCTGACTTGCAAGCC AAGATTTTTCAGAAGGCTGAAGAGGGCGCTCGCAAGTGTATTGTTGCTACCAATATTGCT GAGACCTCATTAACAGTTGATGGTATCTTCTATGTCATTGATACCGGGTATGGGAAGATG AAGGTGTACAACCCGCGGATGGGTATGGACGCCCTCCAGGTTTTCCCAGTCAGCCGGGCA GCTGCCGACCAGCGTGCAGGTCGGGCAGGAAGAACTGGCCCTGGCACATGCTACAGATTG TTCACAGAATCAGCCTACCAGAATGAGATGCTCCCTAACCCTGTGCCAGAGATCCAAAGG ACTAACCTGGGGAATGTGGTGCTTTTACTGAAATCCCTCAGAGTTGAAAACTTGCTCGAC TTTGACTTTATGGACCCACCGCCCCAGGAGAATATCCTCAACTCAATGTACCAACTCTGG GTGTTAGGTGCATTGAACAATGTTGGTGGCCTTACAGAAATTGGCTGGAAGATGGTGGAG TTCCCGTTGGATCCAACTCTGGCAAAAATGCTTCTTATGGGGGAGCAGCTAGAGTGCCTT GATGAGGTGCTGACCATTGTATCCATGCTATCAGTGCCGTCAGTCTTCTTCCGGCCAAAA GACCGAGCAGAGGAGAGTGACGCAGCAAGGGAGAAATTCTTTGTCCCAGAGTCTGACCAC CTGACACTCCTGAACGTGTATCTTCAGTGGAAGTCGAATCAGTATCGAGGCGATTGGTGC AACGACCACTTCCTCCATGTCAAGGGTCTCCGCAAGGCTCGTGAGGTGAGATCTCAGCTG CTGGACATACTGAAAACCCTGAAGATCCCCCTGACATCATGCCATATGGAATGGGACGTG GTGAGGAAGGCTATCTGCTCTGCGTACTTCCACAATTCCGCCCGGTTGAAGGGTATTGGG GAGTACGTCAACTGCCGGAATGGGATGCCGTGCCACCTGCACCCCAGCAGTGCGCTATAT GGCCTTGGCTACACTCCTGACTATGTCGTCTACCATGAGCTTGTCCTGACCACCAAGGAG TACATGCAGTGCGTCACCGCAGTTGATCCACAGTGGCTAGCGGAGATGGGGCCCATGTTC TTCTCTGTGAAGGAGACAGACACCTCTCTTCTTGACCACAAGAAGAGGCAGAAGGAAGAG AAGACGGCGATGGAGGAGGAGATGGAGAAGCTGAGGCGGCAGCAAGCAGAGGCCGCGCGC ATGGAGAAGGAGAAGGAACGGGAGAAGAGAGCTAAGCAGCAGCAACAGGTTGCTATGCCC GGCCTGAAGAAGGGTGCGACTTATCTGAGGCCCAAGAGAATGGGTCTGTAG

Peptide Sequence

PEP ID	Zm00001d006459_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:2:208858830:208874179:-1 gene:Zm00001d006459 transcript:Zm00001d006459_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
Sequence	MAHAGRSGTGAQAQGAPRPSSHQVPSKTSAVAAGGSSSAPTPTSAAANAMPSSSAQAPPS EGPDTLADKKRAAGGGSVFKPPPPMVAVAVGSIDEDEKPGPTENDATSLSTTIRSNSLRR YRGSGSDDKTSLNVTDEDERAPSPNHQDEPHRQEAHISRSSQGSRPHGTPRGYGYYDDRG SHDKHGDRERSASIGYSNSGRRRYHDDRESHTRRAERERSTSNEYTNKRSRHEHSSRSSR TSARSDWDDGRWEWEDTPRRDYRDNRPGSRRQHPTRSPMLAAASPDARLVSPWLDGNTPR LAASPWDNVSPSPAPIRASGSSKGSSYSHSSGRSHQLTFSSTTSSNIIDADRSPSNPDRN SEITEEMMQEMDYNADRAWYDCEEHTTMFDGDHSMYLGDDNSYKKREAEMPKKLTRRDGS LMTLAQSKKMSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDDEEERKVILLVHDTKPPFL DGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNKSRQRFWELAGSKLGN ILGVEKTAEQVDADTAVVGDQGEINFKEEAKFSQHLKDKAEAVSDFAKSKSLSQQRQYLP IFTVRDDLLQVVRENQVVVVVGETGSGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSV AKRVSEEMETDLGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDADLDKYRVVVMDE AHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNADKFSKFFGGVPVFHIPGRTFPVNI MFSKTPCEDYVEAAVKQAMTIHITSGLGDILIFMTGQEEIEATCYALAERMEQLISSSTK TIPKLEILPIYSQLPADLQAKIFQKAEEGARKCIVATNIAETSLTVDGIFYVIDTGYGKM KVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLFTESAYQNEMLPNPVPEIQR TNLGNVVLLLKSLRVENLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTEIGWKMVE FPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDH LTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTSCHMEWDV VRKAICSAYFHNSARLKGIGEYVNCRNGMPCHLHPSSALYGLGYTPDYVVYHELVLTTKE YMQCVTAVDPQWLAEMGPMFFSVKETDTSLLDHKKRQKEEKTAMEEEMEKLRRQQAEAAR MEKEKEREKRAKQQQQVAMPGLKKGATYLRPKRMGL

Transcript Sequence

Transcript ID	Zm00001d006459_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:208858830:208874179:-1 gene:Zm00001d006459 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
Sequence	ACCCGGACAAGAGGCAAACGGCAAACCCGATCGGCCGATCCATTCTCCAACCCTAGCCGC CGGCCGCCGCCACCTACCCGGCTACCCCACGTTTCCAGTCCCCACTCCCTCCGCCGGCGC ATCCTGCTTCCAGCCTCCATCGGCGCATCCTGCTCCTGGCCTCCCGCCACCGGCGCATCC TTGCTCCCGGCCTCCTGCCACCGGCCGCATCCCCAGGGCCGCGAGATCCTGCTCCCGCCA CCGGCCGCCGCAACCTGCCAGCGTCCAGGGCACTCGCCCCCACCATCCGCCGCCGCCCCC CACCGGCAGTCGCAACCTGCCAGCGTCCAGGGCTCCAGGCAAGGGCCGCCACGTGACCAC GTCTCGCAGGTCAGCAGGTCCCTTGCCTCCTTCCATGGCGCATGCTGGTAGGAGCGGAAC CGGCGCTCAAGCACAAGGTGCCCCGAGGCCGAGCAGTCATCAAGTTCCCTCAAAGACAAG TGCTGTGGCTGCAGGAGGTTCCTCAAGTGCACCTACACCGACGAGTGCTGCTGCAAATGC AATGCCATCTTCAAGTGCTCAAGCTCCACCATCAGAAGGTCCTGACACCCTTGCTGACAA GAAACGGGCAGCGGGCGGTGGCTCTGTGTTTAAGCCACCCCCTCCCATGGTAGCTGTTGC TGTGGGTTCCATCGATGAAGATGAGAAGCCAGGACCTACAGAGAATGACGCGACAAGCCT CTCTACGACAATTCGCAGTAACTCATTGCGACGCTACCGAGGAAGTGGTTCCGATGATAA AACATCTTTGAATGTCACTGATGAGGACGAAAGGGCCCCATCACCCAACCATCAGGATGA GCCCCACCGGCAAGAGGCCCACATCTCTAGAAGCTCTCAAGGTTCTCGTCCTCATGGCAC TCCTCGTGGTTATGGTTACTATGATGATAGAGGATCCCATGATAAACATGGTGATCGTGA GAGATCTGCATCCATTGGCTATAGTAATAGTGGAAGGCGAAGATACCATGATGATAGAGA ATCTCATACTAGGCGCGCTGAGCGTGAGAGGTCTACATCAAATGAATATACTAACAAGAG AAGTCGACATGAGCATAGCTCAAGAAGCTCAAGAACATCTGCACGATCTGATTGGGATGA TGGACGCTGGGAATGGGAAGATACACCTCGTCGAGATTATCGTGATAATCGTCCTGGCTC CCGGAGACAACATCCAACACGATCTCCTATGCTCGCTGCTGCATCCCCGGATGCACGCCT GGTATCTCCTTGGTTAGACGGGAATACACCACGTCTAGCAGCGTCCCCGTGGGATAATGT ATCCCCTTCACCTGCTCCAATACGTGCTTCTGGTTCCTCAAAAGGGTCTTCTTATTCACA TTCCAGTGGAAGATCACACCAGCTTACCTTTTCATCAACTACTAGTTCTAATATTATTGA TGCTGATAGAAGCCCCTCAAATCCTGATAGGAACAGTGAGATAACCGAGGAAATGATGCA GGAGATGGACTACAATGCTGACCGTGCATGGTATGACTGCGAAGAACACACTACCATGTT TGATGGTGATCATTCTATGTATCTTGGAGATGATAATTCCTACAAAAAGAGGGAAGCAGA GATGCCGAAGAAGCTGACTCGTAGAGATGGTAGCCTGATGACCCTTGCTCAAAGCAAAAA GATGTCACAGATGACTGCTGATAATGCTCAGTGGGAGGATAGACAATTGTTGAGATCTGG AGCTGTTAAAGGAACAGAAGTGCAAACTGAATTTGATGATGAGGAGGAACGGAAAGTAAT ACTTCTTGTTCATGACACAAAGCCCCCCTTCCTGGATGGGAGAGTTGTTTTCACAAAACA AGCAGAACCTGTAATGCCTCTGAAGGACCCAACATCTGATATGGCTATTATTGCACGCAA AGGTTCTAGTCTGGTTAGGGAAATCCGTGAAAAGCAAAGCATGAACAAATCAAGGCAACG ATTTTGGGAGCTTGCTGGATCTAAGCTTGGCAATATCTTGGGTGTTGAGAAAACAGCTGA ACAGGTTGATGCAGATACTGCTGTTGTTGGTGACCAAGGTGAGATTAATTTTAAAGAAGA AGCAAAGTTTTCACAACATTTGAAGGATAAAGCAGAAGCTGTCAGTGATTTTGCAAAATC AAAATCCCTTTCTCAACAAAGGCAATATCTTCCCATATTTACCGTCCGGGATGATCTGCT ACAGGTTGTGCGTGAAAATCAAGTGGTTGTGGTTGTTGGTGAAACTGGTTCTGGGAAGAC TACTCAACTGACTCAGTATCTGCATGAGGATGGATATACTACCACAGGAGTTGTTGGTTG TACCCAACCAAGGCGTGTGGCTGCCATGAGTGTTGCTAAGCGAGTCAGCGAGGAAATGGA GACTGATCTGGGAGATAAAGTCGGATATGCCATACGGTTTGAGGATGTCACTGGTCCAAA CACTATAATAAAGTATATGACAGATGGAGTGCTTCTCCGTGAAACCTTGAAAGATGCTGA CCTCGACAAATATCGTGTTGTTGTCATGGATGAAGCACATGAAAGATCACTCAACACTGA TGTTTTGTTTGGTATACTGAAGAAGGTTGTTGCACGTAGACGGGATTTTAAACTAATCGT TACATCTGCAACCCTAAATGCTGACAAGTTCTCCAAGTTCTTCGGAGGTGTGCCTGTATT CCATATTCCGGGTCGGACTTTCCCAGTTAACATTATGTTCAGCAAAACACCATGTGAGGA CTATGTGGAAGCTGCAGTGAAGCAGGCCATGACTATCCACATAACCAGCGGCCTTGGTGA TATCCTAATCTTCATGACTGGGCAGGAAGAAATTGAGGCTACCTGCTATGCGCTTGCTGA ACGCATGGAACAGTTAATATCGTCATCCACCAAGACTATCCCCAAGCTAGAGATTCTGCC CATCTACTCACAGTTGCCTGCTGACTTGCAAGCCAAGATTTTTCAGAAGGCTGAAGAGGG CGCTCGCAAGTGTATTGTTGCTACCAATATTGCTGAGACCTCATTAACAGTTGATGGTAT CTTCTATGTCATTGATACCGGGTATGGGAAGATGAAGGTGTACAACCCGCGGATGGGTAT GGACGCCCTCCAGGTTTTCCCAGTCAGCCGGGCAGCTGCCGACCAGCGTGCAGGTCGGGC AGGAAGAACTGGCCCTGGCACATGCTACAGATTGTTCACAGAATCAGCCTACCAGAATGA GATGCTCCCTAACCCTGTGCCAGAGATCCAAAGGACTAACCTGGGGAATGTGGTGCTTTT ACTGAAATCCCTCAGAGTTGAAAACTTGCTCGACTTTGACTTTATGGACCCACCGCCCCA GGAGAATATCCTCAACTCAATGTACCAACTCTGGGTGTTAGGTGCATTGAACAATGTTGG TGGCCTTACAGAAATTGGCTGGAAGATGGTGGAGTTCCCGTTGGATCCAACTCTGGCAAA AATGCTTCTTATGGGGGAGCAGCTAGAGTGCCTTGATGAGGTGCTGACCATTGTATCCAT GCTATCAGTGCCGTCAGTCTTCTTCCGGCCAAAAGACCGAGCAGAGGAGAGTGACGCAGC AAGGGAGAAATTCTTTGTCCCAGAGTCTGACCACCTGACACTCCTGAACGTGTATCTTCA GTGGAAGTCGAATCAGTATCGAGGCGATTGGTGCAACGACCACTTCCTCCATGTCAAGGG TCTCCGCAAGGCTCGTGAGGTGAGATCTCAGCTGCTGGACATACTGAAAACCCTGAAGAT CCCCCTGACATCATGCCATATGGAATGGGACGTGGTGAGGAAGGCTATCTGCTCTGCGTA CTTCCACAATTCCGCCCGGTTGAAGGGTATTGGGGAGTACGTCAACTGCCGGAATGGGAT GCCGTGCCACCTGCACCCCAGCAGTGCGCTATATGGCCTTGGCTACACTCCTGACTATGT CGTCTACCATGAGCTTGTCCTGACCACCAAGGAGTACATGCAGTGCGTCACCGCAGTTGA TCCACAGTGGCTAGCGGAGATGGGGCCCATGTTCTTCTCTGTGAAGGAGACAGACACCTC TCTTCTTGACCACAAGAAGAGGCAGAAGGAAGAGAAGACGGCGATGGAGGAGGAGATGGA GAAGCTGAGGCGGCAGCAAGCAGAGGCCGCGCGCATGGAGAAGGAGAAGGAACGGGAGAA GAGAGCTAAGCAGCAGCAACAGGTTGCTATGCCCGGCCTGAAGAAGGGTGCGACTTATCT GAGGCCCAAGAGAATGGGTCTGTAGATAAGACCTGATATAACTTAACTGTCTCCGGTGAT TTTGTTACTAGGCTGAGGGAACTTGTAATGTGTAGCCTGCTCAAGCAGCATGTAAAACAA CACGTCAATGTGAATGTATACAACATCGACATG