Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006440_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:2:208245761:208249764:-1 gene:Zm00001d006440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta-1
Sequence	ATGTATAAGCAGGGGGGAGCGGGGGTAGGGGCTGGTCTGGACCGGAAACGGATCAGCGAC GCGCTAGACAAGCACCTTGAGAAGGCGGTCGCATCGCCGTCCACATCGAGGGGGTCAGCG GGCGGCGGCGGTGTGCGCGACCACCACCGCCTCGTCGTGCCGTCCTCCGTGTCGTCCATC CCCAAGGGCCGCTGCTCCGAAGGGGAGTCTGATTCTGATAGTGAAGCATCAGATGTTAGT GGCTCTGATGGAGAAGACACCTCGTGGATTTCATGGTATTGCAACTTAAGAGGGAATGAG TTCTTCTGTGAAGTCGATGATGACTACATTCAAGACGACTTCAACCTTTGTGGCCTCAGC AGCCAAGTTCCTTATTATGATTATGCTCTTGATCTCATTTTAGATATTGAATCATCTCAT GGTGATATGTTCACTGAGGAACAAAATGAGCTCGTAGAATCAGCTGCAGAGATGCTTTAT GGGCTGATCCATGCACGATACATTCTGACCAGTAAAGGGCTGGCTGCAATGCTGGAGAAG TATAGGAACTATGACTTCGGGCGGTGCCCGCGTGTTTACTGCTGTGGTCAACCATGCCTG CCGGTTGGACAATCAGATATTCATCGATCTAGTACCGTGAAAATATACTGCCCCAAGTGT GAAGACATCTACTACCCACGGTCCAAGTACCAAGGCAGTATCCTAACCATACTCTTATTA TACTATCTTTATGCGTGCGTTTCAAACTTTGATCTCTTCGTGAGAACTCAAACGTATGAC ATCGATGGCGCATATTTTGGGACAACGTTCCCTCACCTGTTCCTGATGACATACGAGCAC CTCAAGCTACAGAAGCCCTTGCAGCGCTATGTTCCTCGTGTCTTTGGCTTCAAGCTCCAC AAGCCATGA

Peptide Sequence

PEP ID	Zm00001d006440_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:2:208245761:208249764:-1 gene:Zm00001d006440 transcript:Zm00001d006440_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta-1
Sequence	MYKQGGAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRDHHRLVVPSSVSSI PKGRCSEGESDSDSEASDVSGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLS SQVPYYDYALDLILDIESSHGDMFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEK YRNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGSILTILLL YYLYACVSNFDLFVRTQTYDIDGAYFGTTFPHLFLMTYEHLKLQKPLQRYVPRVFGFKLH KP

Transcript Sequence

Transcript ID	Zm00001d006440_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:208245761:208249764:-1 gene:Zm00001d006440 gene_biotype:protein_coding transcript_biotype:protein_coding description:Casein kinase II subunit beta-1
Sequence	TGTTTCCTATCCTTTTTCATTCCCACCCGCCCATCCCTTCAAAATTCGCTGCGTGTCCCT CTCTCTCCCTGCGCTCGTGCTCCGCCCAGGCCCCTTTCCTCCACCGCGGGCGCAAACCCT AACCCTACAGCCGCTCGCCCCGCGGCGCCTGCCAATGGCGCGCCCCGTGTGAGTGTGTGT GAGAGGCAGAGACCTAGAGGCCGCTACCCGGGGAGGAGAGGGAGGGAGAGGGAGAGGCTG ATAGATGTATAAGCAGGGGGGAGCGGGGGTAGGGGCTGGTCTGGACCGGAAACGGATCAG CGACGCGCTAGACAAGCACCTTGAGAAGGCGGTCGCATCGCCGTCCACATCGAGGGGGTC AGCGGGCGGCGGCGGTGTGCGCGACCACCACCGCCTCGTCGTGCCGTCCTCCGTGTCGTC CATCCCCAAGGGCCGCTGCTCCGAAGGGGAGTCTGATTCTGATAGTGAAGCATCAGATGT TAGTGGCTCTGATGGAGAAGACACCTCGTGGATTTCATGGTATTGCAACTTAAGAGGGAA TGAGTTCTTCTGTGAAGTCGATGATGACTACATTCAAGACGACTTCAACCTTTGTGGCCT CAGCAGCCAAGTTCCTTATTATGATTATGCTCTTGATCTCATTTTAGATATTGAATCATC TCATGGTGATATGTTCACTGAGGAACAAAATGAGCTCGTAGAATCAGCTGCAGAGATGCT TTATGGGCTGATCCATGCACGATACATTCTGACCAGTAAAGGGCTGGCTGCAATGCTGGA GAAGTATAGGAACTATGACTTCGGGCGGTGCCCGCGTGTTTACTGCTGTGGTCAACCATG CCTGCCGGTTGGACAATCAGATATTCATCGATCTAGTACCGTGAAAATATACTGCCCCAA GTGTGAAGACATCTACTACCCACGGTCCAAGTACCAAGGCAGTATCCTAACCATACTCTT ATTATACTATCTTTATGCGTGCGTTTCAAACTTTGATCTCTTCGTGAGAACTCAAACGTA TGACATCGATGGCGCATATTTTGGGACAACGTTCCCTCACCTGTTCCTGATGACATACGA GCACCTCAAGCTACAGAAGCCCTTGCAGCGCTATGTTCCTCGTGTCTTTGGCTTCAAGCT CCACAAGCCATGAGCCTCATGTATTTGGCTTTTAAGCTCTACAACCCAGAGTTTTGCGAG ATCAAGGTCCTTGAAGACTACATATAAGAGCGCCATTGGCTACATATAAAAGCGCTATTG ACAGATCAGTGGATTGATAAAACTCCACCATGCAGCGGAGCGCTTTTACCTTACCTGGCT GGCACCTACCAACATTTGAATGTAGCTCTAAGGATAACGATGTTGTTGTAACCTAACTGT AATTGTTTTTTTGATTAGTAAACCAGGACCCCGTACGATGTAGAGTATGGGCATTATTTA TGGCTTATGCAAAAAAAATCGTTATGC