Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006377_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:2:206076000:206098072:-1 gene:Zm00001d006377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Asparagine--tRNA ligase chloroplastic/mitochondrial
Sequence

ATGGCGGCCGCCGCCGCCGCCCGGATCCTCCGCCTGGCCCCGCGCCGGATTCAGGTTCCC
AAGACCTCCCCGCTCGCCGCACTCTCGTTCCCACTCCCTCGAACGGCGCCGATCGCCGCT
GCCTCGGGAAGGCGGCAGCGCTTCTGCGCCGTGGCGCAGGCCCCCGCCCCCGCAGCCGCG
GCGACAGGGGCGGCGGGAGAGGCCGTGGGGGAGTTCAGGAAGCGGCTGCGGGTGGCGGAC
GTGAAGGGCGGGGAGGACGAGGGCGCCGCGTGGGTGGGCAAGGAGCTCGCCGTGCGCGGG
TGGGTGCGCACCTGCCGCGCCCAGAGGACCATAACCTTCGTCGAGGTCAATGATGGCTCT
TGCTTATCCAATATGCAATGTGTATTGACTCCTGAAACAGAAGGCTATGACCAGATAGAC
TCTGTCACTACTGGAGCATCTGTACTAGTTGAGGGAGTTGTTGCAAGCAGCCAAGGCGGT
AAGCAAAAAGTGGAGTTGAAGGTTTCAAAGATCACCGTGATTGGTAAGAGTGACCCCACA
TCTTTTCCTATACAGAAGAAACGGGCATCAAGAGAATTCCTTAGGACCGTAGCCCATCTC
CGTCCTCGGACAAACACTTTTGGTGCAGTTGCAAGAGTGAGAAATACTCTGGCATACGCA
ACTCATAAATTCTTTCAAGACAATGGATTTGTTTGGGTTTCGAGCCCAATTATTACGGCC
TCAGATTGTGAAGGAGCTGGGGAGCAGTTTTACGTGACTACTTTGCTTTCAAACAGCGCT
GATGGTGGTTCTCTACTCAAAGATATTCCTGCTACCAAGGATGGAAGGGTTGATTGGTCA
CAGGATTTCTTCTGCAAACCAGCATTTCTGACAGTGTCTGGACAGCTTAATGGTGAAACA
TATGCTTCAGCTCTATCTGATATTTACACATTTGGTCCAACGTTTAGGGCTGAAAATTCA
AACACTTCAAGACATCTGGCTGAATTTTGGATGATTGAACCTGAGCTTGCCTTTGCGGAT
CTGAACGATGACATGGCTTGTGCAACTGCATATCTCCAGTATGTAGTAAAGTATATTCTG
GAGAACTGCAAAGAGGATATGGATTTCTTCAATACTTGGATTGAAAAAGGCATCATAGAT
CGGTTAAATGATGTAGTAGAGAAGAACTTCGTTCACCTGTCTTACACTGATGCTGTTGAG
CTACTTCTTGGGTCCAAGAAGGAATTCGAGTTCCCGGTAAAGTGGGGTTTGGATCTTCAA
AGCGAGCATGAGCGATATATCACAGAAGTTGCCTTTGGTGGGCGCCCTGTAATAATTAGA
GATTACCCAAAGGAGATCAAAGCTTTCTATATGAGAGAAAATGATGATGGGAAGACAGTT
GCTGCAATGGATCTGTTGGTTCCTCGGGTTGGTGAACTTATTGGAGGAAGCCAGAGGGAA
GAGCGTCTTGATTACCTTGAAGCCCGGTTGGACGAGCAAAATCTGAATAAGGAGAGCTAC
TGGTGGTATTTGGACCTACGACGATATGGATCAGTTCCACACGCTGGTTTCGGTCTCGGA
TTTGAGCGGCTTGTACAGTTTGCTACTGGAATGGACAACATCAGAGACACCATCCCATTT
CCTCGAGTTCCTGGCTCTGCCGAGTTTTAG

Peptide Sequence

PEP ID

Zm00001d006377_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:2:206076000:206098072:-1 gene:Zm00001d006377 transcript:Zm00001d006377_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Asparagine--tRNA ligase chloroplastic/mitochondrial
Sequence

MAAAAAARILRLAPRRIQVPKTSPLAALSFPLPRTAPIAAASGRRQRFCAVAQAPAPAAA
ATGAAGEAVGEFRKRLRVADVKGGEDEGAAWVGKELAVRGWVRTCRAQRTITFVEVNDGS
CLSNMQCVLTPETEGYDQIDSVTTGASVLVEGVVASSQGGKQKVELKVSKITVIGKSDPT
SFPIQKKRASREFLRTVAHLRPRTNTFGAVARVRNTLAYATHKFFQDNGFVWVSSPIITA
SDCEGAGEQFYVTTLLSNSADGGSLLKDIPATKDGRVDWSQDFFCKPAFLTVSGQLNGET
YASALSDIYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLNDDMACATAYLQYVVKYIL
ENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYTDAVELLLGSKKEFEFPVKWGLDLQ
SEHERYITEVAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRVGELIGGSQRE
ERLDYLEARLDEQNLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPF
PRVPGSAEF

Transcript Sequence

Transcript ID

Zm00001d006377_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:206076000:206098072:-1 gene:Zm00001d006377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Asparagine--tRNA ligase chloroplastic/mitochondrial
Sequence

ACCGCCTCGCTGCCGATGGCGGCCGCCGCCGCCGCCCGGATCCTCCGCCTGGCCCCGCGC
CGGATTCAGGTTCCCAAGACCTCCCCGCTCGCCGCACTCTCGTTCCCACTCCCTCGAACG
GCGCCGATCGCCGCTGCCTCGGGAAGGCGGCAGCGCTTCTGCGCCGTGGCGCAGGCCCCC
GCCCCCGCAGCCGCGGCGACAGGGGCGGCGGGAGAGGCCGTGGGGGAGTTCAGGAAGCGG
CTGCGGGTGGCGGACGTGAAGGGCGGGGAGGACGAGGGCGCCGCGTGGGTGGGCAAGGAG
CTCGCCGTGCGCGGGTGGGTGCGCACCTGCCGCGCCCAGAGGACCATAACCTTCGTCGAG
GTCAATGATGGCTCTTGCTTATCCAATATGCAATGTGTATTGACTCCTGAAACAGAAGGC
TATGACCAGATAGACTCTGTCACTACTGGAGCATCTGTACTAGTTGAGGGAGTTGTTGCA
AGCAGCCAAGGCGGTAAGCAAAAAGTGGAGTTGAAGGTTTCAAAGATCACCGTGATTGGT
AAGAGTGACCCCACATCTTTTCCTATACAGAAGAAACGGGCATCAAGAGAATTCCTTAGG
ACCGTAGCCCATCTCCGTCCTCGGACAAACACTTTTGGTGCAGTTGCAAGAGTGAGAAAT
ACTCTGGCATACGCAACTCATAAATTCTTTCAAGACAATGGATTTGTTTGGGTTTCGAGC
CCAATTATTACGGCCTCAGATTGTGAAGGAGCTGGGGAGCAGTTTTACGTGACTACTTTG
CTTTCAAACAGCGCTGATGGTGGTTCTCTACTCAAAGATATTCCTGCTACCAAGGATGGA
AGGGTTGATTGGTCACAGGATTTCTTCTGCAAACCAGCATTTCTGACAGTGTCTGGACAG
CTTAATGGTGAAACATATGCTTCAGCTCTATCTGATATTTACACATTTGGTCCAACGTTT
AGGGCTGAAAATTCAAACACTTCAAGACATCTGGCTGAATTTTGGATGATTGAACCTGAG
CTTGCCTTTGCGGATCTGAACGATGACATGGCTTGTGCAACTGCATATCTCCAGTATGTA
GTAAAGTATATTCTGGAGAACTGCAAAGAGGATATGGATTTCTTCAATACTTGGATTGAA
AAAGGCATCATAGATCGGTTAAATGATGTAGTAGAGAAGAACTTCGTTCACCTGTCTTAC
ACTGATGCTGTTGAGCTACTTCTTGGGTCCAAGAAGGAATTCGAGTTCCCGGTAAAGTGG
GGTTTGGATCTTCAAAGCGAGCATGAGCGATATATCACAGAAGTTGCCTTTGGTGGGCGC
CCTGTAATAATTAGAGATTACCCAAAGGAGATCAAAGCTTTCTATATGAGAGAAAATGAT
GATGGGAAGACAGTTGCTGCAATGGATCTGTTGGTTCCTCGGGTTGGTGAACTTATTGGA
GGAAGCCAGAGGGAAGAGCGTCTTGATTACCTTGAAGCCCGGTTGGACGAGCAAAATCTG
AATAAGGAGAGCTACTGGTGGTATTTGGACCTACGACGATATGGATCAGTTCCACACGCT
GGTTTCGGTCTCGGATTTGAGCGGCTTGTACAGTTTGCTACTGGAATGGACAACATCAGA
GACACCATCCCATTTCCTCGAGTTCCTGGCTCTGCCGAGTTTTAGCGCCCTGAAAGTGTT
GTCGTATACGTATACTTTAGAAACATTCTTTCCTAGGATGTAATGTGAGAAAGGCATACG
TTGTACTGTACTACTGTTTCATCATTGTACAGAGTTAAGCTGAGACTTGTGATTAATCGG
AGGCAAGCAGTGCTGTGGCAAGCTTTGTCGTTTGTTGTAATTGTCGTCAAAGAATGTCAC
TGGTGGATGATGCAATTTTTTCACGGGTAAGACTGAGACC