Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006323_T163
CDS Infomation

cds chromosome:B73_RefGen_v4:2:204596939:204611648:1 gene:Zm00001d006323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase ATX4
Sequence

ATGAAGCGTTCTGAAGGTGATGAGCTTACAGATGATACATCCAAGAATTCATTTATCTCA
TTATTTCTTTCACACCTTGAGAGGAATAATACACCCGAACCCATCGATGACATTCTCAAC
AGTAATGAGCACTATCTTCCTAAGGCCCTGGATGTTGCATGTGGTTCTGATCATCCAGAA
AGTGCCACTAGACAGATTGAAACAAGGGTGCCTAATGATAAGCACTCAAAGTTGGCCTCA
GCCATTGTTCATACGAAAAGGAGATCAGAGGGCATTTCTCTTTCAGTGGCTTCTTCTGGA
TATAATCCTCAAGATGCATCCCATGCTAATAGTCAGGAACACTTGATTCATGGTGATTCC
TTGTCACATTTGCTGCCTAGTCAACCTAACACCGGAATCTCGAAAATTTCTGCAAGGGTT
TCATGTCATGCAAATTGCATGAGCTGCATTCACGTGGGTAATAAATCCCATCAGGTTGCA
CATGGTGAGATTGGGGTTCCCTGTTTCTATGATAAAATGGCCAGGGGCCATGGTACTTTT
GAGCGAGTTGATGACTGCACACATAGAAGTTTGAGAGCTTTCACAAAAATCAGTTGCGAT
AATGGGAAATCTTGTTGTTCTTCTCGTGAGCTTCTACCTAGCTTTTGCCAAAATGATCAG
CCAACATTGGGAAAATCGATTTGTGGATGCTGTTGCAAAATTCAGGAAGATGCTTCCAAG
CTTGGTTTTATACCTGGTCACATGTGCAGAACTCATTTTTCTAGTGATGTTGGTCCAGTT
CTAGCCAATAAGCCTACTATTGAAGGGCTAGATGAATTTTGTGCTTGCAGTTGCTCCACT
TTTACACAACGATCATCATTATGTTCTCGGGAATACGTCTTGCAGTCTTCCTGTGACTCA
TGTCCCATTAATGGACTGCACTGCAGAAGTTGTATGGGACATGCAGCAGATAGCTTAACA
AAACACTCTCTGTTTGATCCTCTTAATACAAAAGAACGAGGTTCTTGTTGCAATGGAAGA
TGCTGCTACTCTGTAGTCCCAAAATGTTTGTCTAGTTGTGACTTTACAAAACACTGTGAT
GTCATAATTGACCAAATAGGTCATGCTGCACCTAAAGATAACCATCAGCTGCAAATGCCT
ACCAGATGCTGCACACTGGGGGAGAATGAGAAGTTAATATGCCAATGCTTAAGCAATAAA
ATAGCTGTAAGAAACTTGCCTCAAACTTCTCATTGTAAAGATGTCTCTGAGAAAGTAATG
AACCAGCCTTCTATTGCTATAACGGAGAGACTGGAGAATGTATCAGAACCTTCAGTGGCT
GATGACAGTTCATCCAAAGCTGTAGCAGAGAAAAAGGATGCTTATAGAGATTCTGCAGTA
TCTAAAGGACAGCCAAATTTTGGTTTCTCATCTGGGTCGTCCAGCATTATAGTGACAAAG
TTCCAGAAATCACCTGAATTTAACAATGTATCCTCTACTGCTAAACATAGCAAACATAAA
AATCTGTGTGATGAAGGATCAAGAATTGAGAAAAGTTCAGCATCCAGCTATGTGCCTACC
AGTACAGGATGTGAAGAACCCCTAAATAGTTCTGCCAAATCTGAGCTGGGTCCATCAAGA
GTGAAGCGCAAATGTAATCAGATTTCTGAGGGAAGGAGACTGGAAGAAACAGATAATGAG
GAACATTGTTCTGAACTGCTAAAAAAGACTAGAACACTGAGGTGCTCTGTTAAAGGTTCT
GAATCAGATGATTGTACTAGGGCTAGTTCCCAGTCGTCCCAGAAGGGGGTTTATCAACCA
CAAAATGAGGTTAACTCATTTTCTTGCAGGGTGTTGAGAACCAAGCGAAAACATCCTATT
ATGCATCTAAATAAGCATGTGAAACAGCTTCACAGACAGACCAAGTTTTTTGAAGGTGAT
GAGCAACCAGATGCCAAGGGCAATTTTCTTGGTGGATTAGATTCCTATGATAGAAAGAGG
CAAGTAGAGGATATGAGCACTCTGGATAAAACAAGACATCACCAGGAAGGGAGTCGAGCA
TTTGTCCGCAAACTTCCTAAATATGTGTCTCTGAATTGCATTGTTAATGAACCGAATACT
AACAGTGAAGGTGCTTGCAGTGGGAGTGGTGGGATTGATTCTAGTTTAATTGCTACAGGG
ATTACAAACGATAACAGGAAATCTCCCAAAATTGTTCCTCTCAATCTGGTTCTTAAAAAG
GCTAAGAGATGCAATGCTGTTAAACTCCGTAAGACAGAAAGCACCCACTTGTATGAGGAG
AAAAGCTCAGATTGTTCTGTGAACAGCTCAGATTATTCTATAGAAAAGTATTCCGTTGAT
GATGAAAATTGCAGCCCACAAGCTGAATATGAACTGCAGGATTCCAAAAGGAGTAGGTAT
TCATCTAATGATCTGAGGTCACATGTGGCTCTCCACAAAAGAACATCTGGTGGAACCAAG
AATCGAAGAACAAGTGTATCCCTTGCCAGGATTAAGAAATTCGGGAGCAAATCAGTATGC
TATTCTGGCAGTGACAAAGACAATGCTGTGCTAGCCCATGAAGTGAATGCTAGGAGATAC
AGTGGAAGACTCAGCTCAAATTCTCCATGCTGTGTTTGTGGGATCTCAGACCTGGAGCCT
TGCAATCGATTAATAGAGTGCAGCAAGTGCTATATCAAAGTGCACCAAGCCTGCTATGGT
GTACTAAAAGTTCCTAGGGGTCAATGGTTTTGCAGACCGTGCAAGAATAATACCATGGAT
ACAGTCTGTGTGCTGTGTGGTTATGGAGGTGGAGCTATGACAAGGGCACTGAAAACCAAG
AATATTTTGAAAAGTTTGCTCCAAGGTTTGATGAATTTAGAAAGGTCAGAATATTATGTT
GATTCCTTAGGAAATGCAAGCAGTGAGTGTACAAGCTTGCAAAATCCAGTAGACAGTGCA
CATGGGGATAACATTATGAATGCGAAGAACATCACCAGCAATTCCTGGACCTCTGGAAAA
TACTATTCGAGTTTACTTGGACCACAACCAATGCAGTGGGTTCACATGGTCTGTGGGCTG
TGGACACCTGGCACAAAATGCCCAAATGACACCACAATGAGCGCTTTTGATGTTTCAGGT
GCTTCACCTGCCAAGAGAAATACTGCATGTTCAATATGTGACAGAACTGGGGGCTCATTT
GTCAAGTGCCGAGCTGTAAATTGTTTGGTATTCTTTCATGCTTGGTGTGCACATCAGAGG
GGTTTGCTGCAAAGTGAGCCTGAAGGCGAGCACAATGAAAATATTGGCTTTTATGGGCGA
TGCGTGTCTCACGCCATTGTTTTTTCTAGTCACGTTAATCCTAAGAAAGAATACTTTAGA
AACAACAATTGGACATGTGCACGTACAGAGGGTTTTAAAGGCCGAAAGGGAGAAGGCTTT
TCTGATAGTAGCCATAAAAAATATGAAGAGTACAGTGGCGAGTTCGGTGTTTCCCAAGAA
CAGATAAATGCTTGGTTACGCATAAATGGTTCAAAGCCCTGCGGACGAGGACAGAAGGAG
TACATCCATTACAAGCAGTTAAAAGGGTGGAAGCATTTGGTTGTTTACAAATCTGGCATA
CATGGACTTGGTCTCTACACATCAGTCTTTATTCCACGCGGCTCTATGGTTGTAGAATAT
GTGGGTGAAATTGTTGGGCAACGGGTTGCTGACAGAAGAGAGATCGAATACCAGTCCGGG
AAACGGCAACAATATAAGAGTGCATGTTATTTCTTTAAGATTGACAGGGAGCATATTATT
GATGCCACCCGCAAAGGTGGGATTGCAAGATTCGTCAATCATTCATGCCAGCCAAACTGC
GTTGCGAAAATAATCTCAGTCAGGAATGAGAAGAAGGTAATGTTCTTTGCAGAACGGCAC
ATAAACCCAGGGGAGGAAATTACGTACGATTACCACTTCAACCGGGAAGATGAAGGCCAG
AGGATCCTTTGCTTTTGTAGATCAAGATACTGCAGGCGGTACCTCAATTAG

Peptide Sequence

PEP ID

Zm00001d006323_P163
PEP Infomation

pep chromosome:B73_RefGen_v4:2:204596939:204611648:1 gene:Zm00001d006323 transcript:Zm00001d006323_T163 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase ATX4
Sequence

MKRSEGDELTDDTSKNSFISLFLSHLERNNTPEPIDDILNSNEHYLPKALDVACGSDHPE
SATRQIETRVPNDKHSKLASAIVHTKRRSEGISLSVASSGYNPQDASHANSQEHLIHGDS
LSHLLPSQPNTGISKISARVSCHANCMSCIHVGNKSHQVAHGEIGVPCFYDKMARGHGTF
ERVDDCTHRSLRAFTKISCDNGKSCCSSRELLPSFCQNDQPTLGKSICGCCCKIQEDASK
LGFIPGHMCRTHFSSDVGPVLANKPTIEGLDEFCACSCSTFTQRSSLCSREYVLQSSCDS
CPINGLHCRSCMGHAADSLTKHSLFDPLNTKERGSCCNGRCCYSVVPKCLSSCDFTKHCD
VIIDQIGHAAPKDNHQLQMPTRCCTLGENEKLICQCLSNKIAVRNLPQTSHCKDVSEKVM
NQPSIAITERLENVSEPSVADDSSSKAVAEKKDAYRDSAVSKGQPNFGFSSGSSSIIVTK
FQKSPEFNNVSSTAKHSKHKNLCDEGSRIEKSSASSYVPTSTGCEEPLNSSAKSELGPSR
VKRKCNQISEGRRLEETDNEEHCSELLKKTRTLRCSVKGSESDDCTRASSQSSQKGVYQP
QNEVNSFSCRVLRTKRKHPIMHLNKHVKQLHRQTKFFEGDEQPDAKGNFLGGLDSYDRKR
QVEDMSTLDKTRHHQEGSRAFVRKLPKYVSLNCIVNEPNTNSEGACSGSGGIDSSLIATG
ITNDNRKSPKIVPLNLVLKKAKRCNAVKLRKTESTHLYEEKSSDCSVNSSDYSIEKYSVD
DENCSPQAEYELQDSKRSRYSSNDLRSHVALHKRTSGGTKNRRTSVSLARIKKFGSKSVC
YSGSDKDNAVLAHEVNARRYSGRLSSNSPCCVCGISDLEPCNRLIECSKCYIKVHQACYG
VLKVPRGQWFCRPCKNNTMDTVCVLCGYGGGAMTRALKTKNILKSLLQGLMNLERSEYYV
DSLGNASSECTSLQNPVDSAHGDNIMNAKNITSNSWTSGKYYSSLLGPQPMQWVHMVCGL
WTPGTKCPNDTTMSAFDVSGASPAKRNTACSICDRTGGSFVKCRAVNCLVFFHAWCAHQR
GLLQSEPEGEHNENIGFYGRCVSHAIVFSSHVNPKKEYFRNNNWTCARTEGFKGRKGEGF
SDSSHKKYEEYSGEFGVSQEQINAWLRINGSKPCGRGQKEYIHYKQLKGWKHLVVYKSGI
HGLGLYTSVFIPRGSMVVEYVGEIVGQRVADRREIEYQSGKRQQYKSACYFFKIDREHII
DATRKGGIARFVNHSCQPNCVAKIISVRNEKKVMFFAERHINPGEEITYDYHFNREDEGQ
RILCFCRSRYCRRYLN

Transcript Sequence

Transcript ID

Zm00001d006323_T163
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:204596939:204611648:1 gene:Zm00001d006323 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone-lysine N-methyltransferase ATX4
Sequence

CAAAGCAAGCAACAAAGATCAGCAAAAGTCTATCCGAACATAATGAACCATCCATTAGTA
CCGGAAATAAGAAGCAACCACTTGAAGTTGTTAATGGCATGAAGCGTTCTGAAGGTGATG
AGCTTACAGATGATACATCCAAGAATTCATTTATCTCATTATTTCTTTCACACCTTGAGA
GGAATAATACACCCGAACCCATCGATGACATTCTCAACAGTAATGAGCACTATCTTCCTA
AGGCCCTGGATGTTGCATGTGGTTCTGATCATCCAGAAAGTGCCACTAGACAGATTGAAA
CAAGGGTGCCTAATGATAAGCACTCAAAGTTGGCCTCAGCCATTGTTCATACGAAAAGGA
GATCAGAGGGCATTTCTCTTTCAGTGGCTTCTTCTGGATATAATCCTCAAGATGCATCCC
ATGCTAATAGTCAGGAACACTTGATTCATGGTGATTCCTTGTCACATTTGCTGCCTAGTC
AACCTAACACCGGAATCTCGAAAATTTCTGCAAGGGTTTCATGTCATGCAAATTGCATGA
GCTGCATTCACGTGGGTAATAAATCCCATCAGGTTGCACATGGTGAGATTGGGGTTCCCT
GTTTCTATGATAAAATGGCCAGGGGCCATGGTACTTTTGAGCGAGTTGATGACTGCACAC
ATAGAAGTTTGAGAGCTTTCACAAAAATCAGTTGCGATAATGGGAAATCTTGTTGTTCTT
CTCGTGAGCTTCTACCTAGCTTTTGCCAAAATGATCAGCCAACATTGGGAAAATCGATTT
GTGGATGCTGTTGCAAAATTCAGGAAGATGCTTCCAAGCTTGGTTTTATACCTGGTCACA
TGTGCAGAACTCATTTTTCTAGTGATGTTGGTCCAGTTCTAGCCAATAAGCCTACTATTG
AAGGGCTAGATGAATTTTGTGCTTGCAGTTGCTCCACTTTTACACAACGATCATCATTAT
GTTCTCGGGAATACGTCTTGCAGTCTTCCTGTGACTCATGTCCCATTAATGGACTGCACT
GCAGAAGTTGTATGGGACATGCAGCAGATAGCTTAACAAAACACTCTCTGTTTGATCCTC
TTAATACAAAAGAACGAGGTTCTTGTTGCAATGGAAGATGCTGCTACTCTGTAGTCCCAA
AATGTTTGTCTAGTTGTGACTTTACAAAACACTGTGATGTCATAATTGACCAAATAGGTC
ATGCTGCACCTAAAGATAACCATCAGCTGCAAATGCCTACCAGATGCTGCACACTGGGGG
AGAATGAGAAGTTAATATGCCAATGCTTAAGCAATAAAATAGCTGTAAGAAACTTGCCTC
AAACTTCTCATTGTAAAGATGTCTCTGAGAAAGTAATGAACCAGCCTTCTATTGCTATAA
CGGAGAGACTGGAGAATGTATCAGAACCTTCAGTGGCTGATGACAGTTCATCCAAAGCTG
TAGCAGAGAAAAAGGATGCTTATAGAGATTCTGCAGTATCTAAAGGACAGCCAAATTTTG
GTTTCTCATCTGGGTCGTCCAGCATTATAGTGACAAAGTTCCAGAAATCACCTGAATTTA
ACAATGTATCCTCTACTGCTAAACATAGCAAACATAAAAATCTGTGTGATGAAGGATCAA
GAATTGAGAAAAGTTCAGCATCCAGCTATGTGCCTACCAGTACAGGATGTGAAGAACCCC
TAAATAGTTCTGCCAAATCTGAGCTGGGTCCATCAAGAGTGAAGCGCAAATGTAATCAGA
TTTCTGAGGGAAGGAGACTGGAAGAAACAGATAATGAGGAACATTGTTCTGAACTGCTAA
AAAAGACTAGAACACTGAGGTGCTCTGTTAAAGGTTCTGAATCAGATGATTGTACTAGGG
CTAGTTCCCAGTCGTCCCAGAAGGGGGTTTATCAACCACAAAATGAGGTTAACTCATTTT
CTTGCAGGGTGTTGAGAACCAAGCGAAAACATCCTATTATGCATCTAAATAAGCATGTGA
AACAGCTTCACAGACAGACCAAGTTTTTTGAAGGTGATGAGCAACCAGATGCCAAGGGCA
ATTTTCTTGGTGGATTAGATTCCTATGATAGAAAGAGGCAAGTAGAGGATATGAGCACTC
TGGATAAAACAAGACATCACCAGGAAGGGAGTCGAGCATTTGTCCGCAAACTTCCTAAAT
ATGTGTCTCTGAATTGCATTGTTAATGAACCGAATACTAACAGTGAAGGTGCTTGCAGTG
GGAGTGGTGGGATTGATTCTAGTTTAATTGCTACAGGGATTACAAACGATAACAGGAAAT
CTCCCAAAATTGTTCCTCTCAATCTGGTTCTTAAAAAGGCTAAGAGATGCAATGCTGTTA
AACTCCGTAAGACAGAAAGCACCCACTTGTATGAGGAGAAAAGCTCAGATTGTTCTGTGA
ACAGCTCAGATTATTCTATAGAAAAGTATTCCGTTGATGATGAAAATTGCAGCCCACAAG
CTGAATATGAACTGCAGGATTCCAAAAGGAGTAGGTATTCATCTAATGATCTGAGGTCAC
ATGTGGCTCTCCACAAAAGAACATCTGGTGGAACCAAGAATCGAAGAACAAGTGTATCCC
TTGCCAGGATTAAGAAATTCGGGAGCAAATCAGTATGCTATTCTGGCAGTGACAAAGACA
ATGCTGTGCTAGCCCATGAAGTGAATGCTAGGAGATACAGTGGAAGACTCAGCTCAAATT
CTCCATGCTGTGTTTGTGGGATCTCAGACCTGGAGCCTTGCAATCGATTAATAGAGTGCA
GCAAGTGCTATATCAAAGTGCACCAAGCCTGCTATGGTGTACTAAAAGTTCCTAGGGGTC
AATGGTTTTGCAGACCGTGCAAGAATAATACCATGGATACAGTCTGTGTGCTGTGTGGTT
ATGGAGGTGGAGCTATGACAAGGGCACTGAAAACCAAGAATATTTTGAAAAGTTTGCTCC
AAGGTTTGATGAATTTAGAAAGGTCAGAATATTATGTTGATTCCTTAGGAAATGCAAGCA
GTGAGTGTACAAGCTTGCAAAATCCAGTAGACAGTGCACATGGGGATAACATTATGAATG
CGAAGAACATCACCAGCAATTCCTGGACCTCTGGAAAATACTATTCGAGTTTACTTGGAC
CACAACCAATGCAGTGGGTTCACATGGTCTGTGGGCTGTGGACACCTGGCACAAAATGCC
CAAATGACACCACAATGAGCGCTTTTGATGTTTCAGGTGCTTCACCTGCCAAGAGAAATA
CTGCATGTTCAATATGTGACAGAACTGGGGGCTCATTTGTCAAGTGCCGAGCTGTAAATT
GTTTGGTATTCTTTCATGCTTGGTGTGCACATCAGAGGGGTTTGCTGCAAAGTGAGCCTG
AAGGCGAGCACAATGAAAATATTGGCTTTTATGGGCGATGCGTGTCTCACGCCATTGTTT
TTTCTAGTCACGTTAATCCTAAGAAAGAATACTTTAGAAACAACAATTGGACATGTGCAC
GTACAGAGGGTTTTAAAGGCCGAAAGGGAGAAGGCTTTTCTGATAGTAGCCATAAAAAAT
ATGAAGAGTACAGTGGCGAGTTCGGTGTTTCCCAAGAACAGATAAATGCTTGGTTACGCA
TAAATGGTTCAAAGCCCTGCGGACGAGGACAGAAGGAGTACATCCATTACAAGCAGTTAA
AAGGGTGGAAGCATTTGGTTGTTTACAAATCTGGCATACATGGACTTGGTCTCTACACAT
CAGTCTTTATTCCACGCGGCTCTATGGTTGTAGAATATGTGGGTGAAATTGTTGGGCAAC
GGGTTGCTGACAGAAGAGAGATCGAATACCAGTCCGGGAAACGGCAACAATATAAGAGTG
CATGTTATTTCTTTAAGATTGACAGGGAGCATATTATTGATGCCACCCGCAAAGGTGGGA
TTGCAAGATTCGTCAATCATTCATGCCAGCCAAACTGCGTTGCGAAAATAATCTCAGTCA
GGAATGAGAAGAAGGTAATGTTCTTTGCAGAACGGCACATAAACCCAGGGGAGGAAATTA
CGTACGATTACCACTTCAACCGGGAAGATGAAGGCCAGAGGATCCTTTGCTTTTGTAGAT
CAAGATACTGCAGGCGGTACCTCAATTAGTTTCCGGTGGGCGTAACATGTCTATATATAA
CTTATATATCTATATGTATATCTTATATATTTACAAATTACAATTGCGATTCATGCCTGC
TGTATATGTAGGAACTTGCATCTAGAACTGCCTGTTTATCTTTTGTGAAGTCAAATGAGT
TATCAGCTGTTCATGTG