Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006319_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:2:204432499:204451772:-1 gene:Zm00001d006319 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein indeterminate-domain 5 chloroplastic
Sequence	ATGCGGCCACGGGGAACCTCTCTGCAACAAAGCTCCGCATCTGCTCTCGGCGACGGCGAT GCGGCGCTACCGAAGAAGAAGAGGAACCGGCCAGGCAATCCGAAACCTGATGCGGAGGTG ATCGCGCTGTCGCCTCGAACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCAGC AAGGGCTTCCAGCGGGACCAGAACCTGCAGCTGCACCTGCGGGGCCACAACATGCCGTGG AAGCTGAAGCAGAAGGACCCCAAGGACGCGCGCCGGCGGGTGTACCTGTGCCCGGAGCCG ACGTGCGTGCACCACAGCCCGTCCCGGGCGCTGGGCGACCTCACGGGGATCAAGAAGCAC TACTGCCGCAAGCACGGCGAGAAGAAGTTCAGGTGCGACAGGTGCAGCAAGCGCTACGCC GTCGAGTCCGACTGGAAGGCGCACGGCAAGACCTGCGGCGCCCGCGAGTATCGCTGCCAC TGCAACGCCCTCTTCTCCAGGAAAGACAACTTCATCACCCACCGCGCTACCTGCGACGCA GCAGTTCGTGGGACCGCCCAGAAGCCACCGCTGGTCGCCGGCCTCTACGTCGGCTCAGGC AGCGATGATAGGCTCGGGCTCTCCGACGCCGCCGCCCAGATGCATGGCTTCGCAGATCAA GGCCAGTCCTCTTCAGCAGCAGAAGCCTCACAGTTTGACCATGTCATGCCATCGTACTCG GGCTCCTCCATGTTCCGTTCTCAGGCGTCAGACTTCTCGTTGTCTTTCTTCCTCGGCGGC GGCACTCCTCTTATCGAACAAGACCTGTCCGACAACGGTGGTGATCTCTCCGAAGGCAGC CAGGGCCCTCTGCTCCATGGCAAGGCGCCCTTGCATGGCGTGATGACGCATCTCCCCGAG CAGCAGTATCAGCCAAACAGCGGCAACGCCAACGTTAACCTCCTGGACATTGGGTTCTTC TCTGGCAACAGTGGTGGCACGTCTGGCAGCCAGGGCCCTCTGCTCCACGGCAAGGAGCCC TTCCATAGCCATGACCTGACGCAACTTCCCGAGCAGCAGCACCAGCCAGGCAGCAGCAAC GCCCGCGTCAACCTCCCTAACCTTGGGGTCTTCTCTGGCAACAGCGGTGGATGGCCCGGA AGCAGCCATCAGGACGCGCGCCTTGTCATCCAAGACCAACTCAACGGCGGCAGCAGCAGC AACACCGAGCATGGTAACGGGATGGCGTCCATCGGAAGCCACTTCGGCGGAGGCTTCGTC CCTTCCCTGCACAACTCATCTCCGTCGGCCGGGCTCTCAGCGACGGCGCTCCTGATGAAG GCGGCTCAGATGGGCTCGACGACGTCGAGCACCACCCACAACCCCAACGGCCCCAGCGCG CTGCTCCGCGCAGCCGGCTTCGCAGGCACTGCCAGCGTCCGGGAGACTAGTAGCAGGGCA GCGGAAGAAGAGAAGTCTCACGAGGCATATTTCCATGATCTCATCATGAACTCACTGCCA TTAACGGGAGGAGGCACCGGCGGCCTCTCAGGGTTGGCGGGCGTGGACGACGGCAATGTG AGCACAAGGGACTTCCTTGGCGTCGGCAGGGACGACGCGACGGCACCGCAGGGCCTCCAC GGCATGGGCGCCCCGAATCCGACCCAGATGAAATGGTACATGTGA

Peptide Sequence

PEP ID	Zm00001d006319_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:2:204432499:204451772:-1 gene:Zm00001d006319 transcript:Zm00001d006319_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein indeterminate-domain 5 chloroplastic
Sequence	MRPRGTSLQQSSASALGDGDAALPKKKRNRPGNPKPDAEVIALSPRTLLATNRFVCEVCS KGFQRDQNLQLHLRGHNMPWKLKQKDPKDARRRVYLCPEPTCVHHSPSRALGDLTGIKKH YCRKHGEKKFRCDRCSKRYAVESDWKAHGKTCGAREYRCHCNALFSRKDNFITHRATCDA AVRGTAQKPPLVAGLYVGSGSDDRLGLSDAAAQMHGFADQGQSSSAAEASQFDHVMPSYS GSSMFRSQASDFSLSFFLGGGTPLIEQDLSDNGGDLSEGSQGPLLHGKAPLHGVMTHLPE QQYQPNSGNANVNLLDIGFFSGNSGGTSGSQGPLLHGKEPFHSHDLTQLPEQQHQPGSSN ARVNLPNLGVFSGNSGGWPGSSHQDARLVIQDQLNGGSSSNTEHGNGMASIGSHFGGGFV PSLHNSSPSAGLSATALLMKAAQMGSTTSSTTHNPNGPSALLRAAGFAGTASVRETSSRA AEEEKSHEAYFHDLIMNSLPLTGGGTGGLSGLAGVDDGNVSTRDFLGVGRDDATAPQGLH GMGAPNPTQMKWYM

Transcript Sequence

Transcript ID	Zm00001d006319_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:204432499:204451772:-1 gene:Zm00001d006319 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein indeterminate-domain 5 chloroplastic
Sequence	GGTGCTAAAACAACGTTTGTCATGCATACCTACTATCTCTTTCTCACACAAGTCTCTTCT CCGTTTTCACTCTCTTGCTAGCTCCTCTTTGTCCTTCAGATCAGATCTCTCAGAAGAGTA GAGTGCCTGCCAGTGCCATGTCGCTGCCAGTCACACAGCCCATTGCATGAGCAGAAGGGC AAGGAAGCTTGGGAGGGTGTAAGCTGAGGATCGGTGACGTGCAAATGCGGCCACGGGGAA CCTCTCTGCAACAAAGCTCCGCATCTGCTCTCGGCGACGGCGATGCGGCGCTACCGAAGA AGAAGAGGAACCGGCCAGGCAATCCGAAACCTGATGCGGAGGTGATCGCGCTGTCGCCTC GAACGCTGCTGGCGACGAACCGGTTCGTGTGCGAGGTGTGCAGCAAGGGCTTCCAGCGGG ACCAGAACCTGCAGCTGCACCTGCGGGGCCACAACATGCCGTGGAAGCTGAAGCAGAAGG ACCCCAAGGACGCGCGCCGGCGGGTGTACCTGTGCCCGGAGCCGACGTGCGTGCACCACA GCCCGTCCCGGGCGCTGGGCGACCTCACGGGGATCAAGAAGCACTACTGCCGCAAGCACG GCGAGAAGAAGTTCAGGTGCGACAGGTGCAGCAAGCGCTACGCCGTCGAGTCCGACTGGA AGGCGCACGGCAAGACCTGCGGCGCCCGCGAGTATCGCTGCCACTGCAACGCCCTCTTCT CCAGGAAAGACAACTTCATCACCCACCGCGCTACCTGCGACGCAGCAGTTCGTGGGACCG CCCAGAAGCCACCGCTGGTCGCCGGCCTCTACGTCGGCTCAGGCAGCGATGATAGGCTCG GGCTCTCCGACGCCGCCGCCCAGATGCATGGCTTCGCAGATCAAGGCCAGTCCTCTTCAG CAGCAGAAGCCTCACAGTTTGACCATGTCATGCCATCGTACTCGGGCTCCTCCATGTTCC GTTCTCAGGCGTCAGACTTCTCGTTGTCTTTCTTCCTCGGCGGCGGCACTCCTCTTATCG AACAAGACCTGTCCGACAACGGTGGTGATCTCTCCGAAGGCAGCCAGGGCCCTCTGCTCC ATGGCAAGGCGCCCTTGCATGGCGTGATGACGCATCTCCCCGAGCAGCAGTATCAGCCAA ACAGCGGCAACGCCAACGTTAACCTCCTGGACATTGGGTTCTTCTCTGGCAACAGTGGTG GCACGTCTGGCAGCCAGGGCCCTCTGCTCCACGGCAAGGAGCCCTTCCATAGCCATGACC TGACGCAACTTCCCGAGCAGCAGCACCAGCCAGGCAGCAGCAACGCCCGCGTCAACCTCC CTAACCTTGGGGTCTTCTCTGGCAACAGCGGTGGATGGCCCGGAAGCAGCCATCAGGACG CGCGCCTTGTCATCCAAGACCAACTCAACGGCGGCAGCAGCAGCAACACCGAGCATGGTA ACGGGATGGCGTCCATCGGAAGCCACTTCGGCGGAGGCTTCGTCCCTTCCCTGCACAACT CATCTCCGTCGGCCGGGCTCTCAGCGACGGCGCTCCTGATGAAGGCGGCTCAGATGGGCT CGACGACGTCGAGCACCACCCACAACCCCAACGGCCCCAGCGCGCTGCTCCGCGCAGCCG GCTTCGCAGGCACTGCCAGCGTCCGGGAGACTAGTAGCAGGGCAGCGGAAGAAGAGAAGT CTCACGAGGCATATTTCCATGATCTCATCATGAACTCACTGCCATTAACGGGAGGAGGCA CCGGCGGCCTCTCAGGGTTGGCGGGCGTGGACGACGGCAATGTGAGCACAAGGGACTTCC TTGGCGTCGGCAGGGACGACGCGACGGCACCGCAGGGCCTCCACGGCATGGGCGCCCCGA ATCCGACCCAGATGAAATGGTACATGTGATGGATCAGGTCGGAAACGCGAAAAGAGGAAG ACAACAAGAAGATGCAAGCTAAGAAGGGAGTCAATAAACAGAACAGAAGATCGTGCACTA GCTAGTGAGTGGCGATCAGAGAGATCGAGAAAACTTAATCTAGTTTTGTTTCGTGGATTA GTTCACTTTTCTCATATGCCGCCCGCCATGATTGATATGGCTAATAGTAACAGGGCTGCA AGCAATGCAGCTGCTGAACTTGTTCATTGCTTTTATTTCGGTACAATTTTGTGGTGTTTT TCAAGTGTTCACTGTTTTGGGTTGGAGAGATGGTGGTGGTCTCTGCAGATGTCGAGTTCA TTATGTAGAGGCCGGACCAGACCAGAATTT