Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006269_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:2:203289756:203291013:-1 gene:Zm00001d006269 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen-specific kinase partner protein

Sequence

ATGGCGACCGCGTCGGAGGACGAGGCCGCCTCGGACCGCTGCAGCGGCAGCTACAGCCCC
AGCGCCGACGTCAGCGAGTCCGAAACCTCCAGTGACTGCTCCGCGCCCACCACGCGCCGC
TTCGCCTCCTCCTCCTCGGCCTCCGCCACCGTCTCCCGCCTCGCGTCCTCCTCCTCGTCG
CTCCCCACCCCGGCATCGGCCGCCGCCTTCTACCTCTCCAAGCCAACCCCCGACCTCTCC
GAGATCGACATGATGAAGGAGCGCTTCGCGAAGCTCCTGCTCGGCGAGGACATGTCGGGC
AGCGGGAAGGGCGTCTGCACCGCGCTCGCCATCTCCAATGCCATCACCAACCTCTCCGCC
ACCGTGTTCGGCGAGCTGTGGAGGCTGGAGCCGCTCGCGACGGCGAGGAAGGCGATGTGG
ACGCGGGAGATGGAGTGGCTGCTCTCCGTCGCTGACTCCATCGTCGAGCTCACCCCCTCC
ATCCAGGAGCTCCCCGAAGGCGGCGGCCAGTTCGAGGTCATGGTCCCGCGCCCGCGCAGC
GACCTCTACATGAACCTCCCCGCGCTCAAGAAACTCGACGCCATGCTCCTCGCGATGATT
GACGGGTTCAAGGATACGGAGTTCTGGTACGTGGACAGAGGGGTTATGGTCGAGGATAGC
GGGGGTCCGTTCCCGTCCTCATCCTCGTCGTCTTGTGGCCGGCCGTCAGTGCGGCAGGAG
GACAAGTGGTGGTTGCCCTGCCCAAGAGTGCCGCCCAAGGGGCTGTCTGAGGACGCGAGG
AGGAAGTTGCAGCAAAGCAGGGATTGTGCAAACCAGATACTCAAGGCGGCCATGGCGATT
AACAGCGATGTGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAG
GTAAAACAATTACAG

Peptide Sequence

PEP ID

Zm00001d006269_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:2:203289756:203291013:-1 gene:Zm00001d006269 transcript:Zm00001d006269_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen-specific kinase partner protein

Sequence

MATASEDEAASDRCSGSYSPSADVSESETSSDCSAPTTRRFASSSSASATVSRLASSSSS
LPTPASAAAFYLSKPTPDLSEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLSA
TVFGELWRLEPLATARKAMWTREMEWLLSVADSIVELTPSIQELPEGGGQFEVMVPRPRS
DLYMNLPALKKLDAMLLAMIDGFKDTEFWYVDRGVMVEDSGGPFPSSSSSSCGRPSVRQE
DKWWLPCPRVPPKGLSEDARRKLQQSRDCANQILKAAMAINSDVLAEMEIPEVYLETLPK
VKQLQ

Transcript Sequence

Transcript ID

Zm00001d006269_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:203289756:203291013:-1 gene:Zm00001d006269 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen-specific kinase partner protein

Sequence

GCTGTGCCTGTGCGTCCAGTTCCATCGCTTTCCCTCCTCCCCAGTCCCCACTCCCAGATG
CGATTTCCCTCTCCACCGCCACAGCGCCTAGCTTAGCCAGCCAGCCGGCGGCCATCGCCG
CCGCAATGGCGACCGCGTCGGAGGACGAGGCCGCCTCGGACCGCTGCAGCGGCAGCTACA
GCCCCAGCGCCGACGTCAGCGAGTCCGAAACCTCCAGTGACTGCTCCGCGCCCACCACGC
GCCGCTTCGCCTCCTCCTCCTCGGCCTCCGCCACCGTCTCCCGCCTCGCGTCCTCCTCCT
CGTCGCTCCCCACCCCGGCATCGGCCGCCGCCTTCTACCTCTCCAAGCCAACCCCCGACC
TCTCCGAGATCGACATGATGAAGGAGCGCTTCGCGAAGCTCCTGCTCGGCGAGGACATGT
CGGGCAGCGGGAAGGGCGTCTGCACCGCGCTCGCCATCTCCAATGCCATCACCAACCTCT
CCGCCACCGTGTTCGGCGAGCTGTGGAGGCTGGAGCCGCTCGCGACGGCGAGGAAGGCGA
TGTGGACGCGGGAGATGGAGTGGCTGCTCTCCGTCGCTGACTCCATCGTCGAGCTCACCC
CCTCCATCCAGGAGCTCCCCGAAGGCGGCGGCCAGTTCGAGGTCATGGTCCCGCGCCCGC
GCAGCGACCTCTACATGAACCTCCCCGCGCTCAAGAAACTCGACGCCATGCTCCTCGCGA
TGATTGACGGGTTCAAGGATACGGAGTTCTGGTACGTGGACAGAGGGGTTATGGTCGAGG
ATAGCGGGGGTCCGTTCCCGTCCTCATCCTCGTCGTCTTGTGGCCGGCCGTCAGTGCGGC
AGGAGGACAAGTGGTGGTTGCCCTGCCCAAGAGTGCCGCCCAAGGGGCTGTCTGAGGACG
CGAGGAGGAAGTTGCAGCAAAGCAGGGATTGTGCAAACCAGATACTCAAGGCGGCCATGG
CGATTAACAGCGATGTGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGC
CCAAGGTAAAACAATTACAGCT