Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006260_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:203038721:203039941:1 gene:Zm00001d006260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	ATGGAGGTGAAGGTGCTGAGCTCCAAGCTCGTGAAACCGTCCTACCCGGCGGGCGCGCCG CGGCCGGACACCACAAAGCACGTGCCGTCGTCGGTGTTCGACAAGGCCACGTACCACACG CAGACGGTCACCATCTACTACATCTCTCCGCCGGTCCCGTCCCCAGACGCCATCGAGCGC GGCTACGCCACGGCGCTGGGCGCGTACCGGCTCTTCGCCGGCCAGGTCCGCCCGGGTCCG GACGGCGCGCCAGGGGTGCTGCTCAACGACCACGGCGCCCGCCTCGTGGAGGCGTCCGTG GACGCGCGCCTCGCCGACATCGCCCCCACGAAGCCGCCCCCCGCCGTGCTGCGGCTGCAC CCGGACCTCGACATCGTGGAGGTGGTGCAGGTGCAGCTCACGCGGTTCGCGTGCGGCTCG CTCGCCGTGGGCTTCACCGCCAACCCCGCCGTGGCGGACGGCCACGCCACCAGCGACTTC CTCGTCGCCTGGGACCGCGCCGCGCGCGGGCTCCCCGTCGGCCCGTCGCCGCCGGTCCAC TTCCCGCCGCGCCACGACCCGCCGCGCGCCGGGTTCGAGCACCGCGGCGTGGAGTACTAC AGGCCCGCGCCGTCGTTGGCCCACGGCCACGTCCACGGCGACACTACCCAGCACAGCATC GTGGTCCACAAGGCTCACTTCACCAAGGACTTCGTGGCGGGGCTCCGCGCCAGGGCGTCC GAAGGCCGTGGCCGTCCCTTCAGCCGGTTCGAGACGATCCTCGCCCACGTCTGGCGCACC ATGACGCGCGCGCGCGGGCTGGGCAGCAACCCGCTCCAGATCTCCACCATCCGCATCTCC GTGGACGGCCGGCCGCGCCTCGCGGCGGCGCCGGCAGGCTACTTCGGGAACCTGGTCCTC TGGGCGTTCCCGCGCGCCACGGTGGGGAGCCTCCTCGGCCGGCCGCTGAAGCACGCGGCG CAGGCGATCCACGACGCCGTGGCGCGGGTGGACGGGGCCTACGACTTCCAGTCGTTCGTC GACTTCGCGGGCTCCGGCACGGTGGAGAAGGAAGGGCTGGAGACGACGGCCCCTGCTCAA GGAGGAAGGGCCTACTTCCCCACGGAGGGCATGCTGTTACTGGTGCCGTCCTACATCGGC GACGGCAGCATCGACGCCATCGTGCCGGTGTTCGAGCACAACCTGGATGCGTTCAAGCAG TGCTGCTACTCCATGGAGTAG

Peptide Sequence

PEP ID	Zm00001d006260_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:203038721:203039941:1 gene:Zm00001d006260 transcript:Zm00001d006260_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	MEVKVLSSKLVKPSYPAGAPRPDTTKHVPSSVFDKATYHTQTVTIYYISPPVPSPDAIER GYATALGAYRLFAGQVRPGPDGAPGVLLNDHGARLVEASVDARLADIAPTKPPPAVLRLH PDLDIVEVVQVQLTRFACGSLAVGFTANPAVADGHATSDFLVAWDRAARGLPVGPSPPVH FPPRHDPPRAGFEHRGVEYYRPAPSLAHGHVHGDTTQHSIVVHKAHFTKDFVAGLRARAS EGRGRPFSRFETILAHVWRTMTRARGLGSNPLQISTIRISVDGRPRLAAAPAGYFGNLVL WAFPRATVGSLLGRPLKHAAQAIHDAVARVDGAYDFQSFVDFAGSGTVEKEGLETTAPAQ GGRAYFPTEGMLLLVPSYIGDGSIDAIVPVFEHNLDAFKQCCYSME

Transcript Sequence

Transcript ID	Zm00001d006260_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:203038721:203039941:1 gene:Zm00001d006260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spermidine hydroxycinnamoyl transferase
Sequence	ATGGAGGTGAAGGTGCTGAGCTCCAAGCTCGTGAAACCGTCCTACCCGGCGGGCGCGCCG CGGCCGGACACCACAAAGCACGTGCCGTCGTCGGTGTTCGACAAGGCCACGTACCACACG CAGACGGTCACCATCTACTACATCTCTCCGCCGGTCCCGTCCCCAGACGCCATCGAGCGC GGCTACGCCACGGCGCTGGGCGCGTACCGGCTCTTCGCCGGCCAGGTCCGCCCGGGTCCG GACGGCGCGCCAGGGGTGCTGCTCAACGACCACGGCGCCCGCCTCGTGGAGGCGTCCGTG GACGCGCGCCTCGCCGACATCGCCCCCACGAAGCCGCCCCCCGCCGTGCTGCGGCTGCAC CCGGACCTCGACATCGTGGAGGTGGTGCAGGTGCAGCTCACGCGGTTCGCGTGCGGCTCG CTCGCCGTGGGCTTCACCGCCAACCCCGCCGTGGCGGACGGCCACGCCACCAGCGACTTC CTCGTCGCCTGGGACCGCGCCGCGCGCGGGCTCCCCGTCGGCCCGTCGCCGCCGGTCCAC TTCCCGCCGCGCCACGACCCGCCGCGCGCCGGGTTCGAGCACCGCGGCGTGGAGTACTAC AGGCCCGCGCCGTCGTTGGCCCACGGCCACGTCCACGGCGACACTACCCAGCACAGCATC GTGGTCCACAAGGCTCACTTCACCAAGGACTTCGTGGCGGGGCTCCGCGCCAGGGCGTCC GAAGGCCGTGGCCGTCCCTTCAGCCGGTTCGAGACGATCCTCGCCCACGTCTGGCGCACC ATGACGCGCGCGCGCGGGCTGGGCAGCAACCCGCTCCAGATCTCCACCATCCGCATCTCC GTGGACGGCCGGCCGCGCCTCGCGGCGGCGCCGGCAGGCTACTTCGGGAACCTGGTCCTC TGGGCGTTCCCGCGCGCCACGGTGGGGAGCCTCCTCGGCCGGCCGCTGAAGCACGCGGCG CAGGCGATCCACGACGCCGTGGCGCGGGTGGACGGGGCCTACGACTTCCAGTCGTTCGTC GACTTCGCGGGCTCCGGCACGGTGGAGAAGGAAGGGCTGGAGACGACGGCCCCTGCTCAA GGAGGAAGGGCCTACTTCCCCACGGAGGGCATGCTGTTACTGGTGCCGTCCTACATCGGC GACGGCAGCATCGACGCCATCGTGCCGGTGTTCGAGCACAACCTGGATGCGTTCAAGCAG TGCTGCTACTCCATGGAGTAG