Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006242_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:2:202646763:202649881:-1 gene:Zm00001d006242 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase chloroplastic
Sequence	ATGGCGGCCTCCGCGTCCTCCCTGCTTGCAGACGCCGCATCCTCATCCTGCGGGGCCATC TCTCCGCGTCCCCGGTTGCTTCGTGGAGCTCCGGCCGCCGCCTTCGTCCCCTCGCCGTCG CGTCACTCCTGCTGTTCCCTCCGCGCTTCCCCCGCGAGGCGCCATCGGAGCCGCTTTGTA GCCAGCGCCGTTCCCACGATGCAGCCTCCGGCGGAGTCCAGGGTCTCCACGGTAGTCGAT GTCGACCTCGGCGATCGTAGCTACCCGATCTACATCGGCGCAGGCCTCCTCGACGAGCCG GACCTGCTGCAGAGGCATGTTCATGGTAAGAGGGTTCTGGTGGTGACCAACACGACCGTC GCGCCGCTTTACCTGGAGAAGGTGGCATGGGCACTCACCCACAACAATCCCAATGTGTCA GTGGAGAGTGTGATCCTGCCTGACGGCGAAAAGTACAAAGATATGGACACGCTGATGAAG GTGTTTGACAAGGCAGTCGAGTCCCGGTTTGACCGCCGGTGCACATTTGTAGCACTGGGT GGTGGTGTCATCGGGGACATGTGTGGATTTGCAGCTGCTGCATTCCTCCGGGGCGTCAAT TTCATACAGATACCAACTACTCTGATGGCCCAGGTGGATTCATCTGTTGGCGGGAAAACT GGGATTAACCACCCACTAGGGAAGAACTTGATTGGAGCATTCTACCAGCCACAATGTGTT CTAATTGACACAGATACACTGAACACATTGCCTGACAGGGAGCTAGCCTCAGGCATTGCC GAGGTAGTGAAGTATGGGCTCATAAGGGATGCACCATTCTTTGAGTGGCAAGAGAAAAAC ATGCCTGAATTGTTAGCAAGAGAACCAAATGCTTTGGCCTATGCTATCAAGAGATCTTGT GAAAACAAAGCTGAGGTGGTCGCACAAGATGAGAAGGAAAGTGGCCTACGAGCAACACTA AACCTGGGTCACACATTTGGCCATGTATGTGTTATCATGTTTGGATTTTTATGTCTGATT ATTTTTTACTGTCATTGA

Peptide Sequence

PEP ID	Zm00001d006242_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:2:202646763:202649881:-1 gene:Zm00001d006242 transcript:Zm00001d006242_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase chloroplastic
Sequence	MAASASSLLADAASSSCGAISPRPRLLRGAPAAAFVPSPSRHSCCSLRASPARRHRSRFV ASAVPTMQPPAESRVSTVVDVDLGDRSYPIYIGAGLLDEPDLLQRHVHGKRVLVVTNTTV APLYLEKVAWALTHNNPNVSVESVILPDGEKYKDMDTLMKVFDKAVESRFDRRCTFVALG GGVIGDMCGFAAAAFLRGVNFIQIPTTLMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCV LIDTDTLNTLPDRELASGIAEVVKYGLIRDAPFFEWQEKNMPELLAREPNALAYAIKRSC ENKAEVVAQDEKESGLRATLNLGHTFGHVCVIMFGFLCLIIFYCH

Transcript Sequence

Transcript ID	Zm00001d006242_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:202646763:202649881:-1 gene:Zm00001d006242 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase chloroplastic
Sequence	ACACCACCACATTGCCGTCACCGTCACCGCCGGCCCGCCGCCACCGCTTCCCAAGCTATC TCATGGCGGCCTCCGCGTCCTCCCTGCTTGCAGACGCCGCATCCTCATCCTGCGGGGCCA TCTCTCCGCGTCCCCGGTTGCTTCGTGGAGCTCCGGCCGCCGCCTTCGTCCCCTCGCCGT CGCGTCACTCCTGCTGTTCCCTCCGCGCTTCCCCCGCGAGGCGCCATCGGAGCCGCTTTG TAGCCAGCGCCGTTCCCACGATGCAGCCTCCGGCGGAGTCCAGGGTCTCCACGGTAGTCG ATGTCGACCTCGGCGATCGTAGCTACCCGATCTACATCGGCGCAGGCCTCCTCGACGAGC CGGACCTGCTGCAGAGGCATGTTCATGGTAAGAGGGTTCTGGTGGTGACCAACACGACCG TCGCGCCGCTTTACCTGGAGAAGGTGGCATGGGCACTCACCCACAACAATCCCAATGTGT CAGTGGAGAGTGTGATCCTGCCTGACGGCGAAAAGTACAAAGATATGGACACGCTGATGA AGGTGTTTGACAAGGCAGTCGAGTCCCGGTTTGACCGCCGGTGCACATTTGTAGCACTGG GTGGTGGTGTCATCGGGGACATGTGTGGATTTGCAGCTGCTGCATTCCTCCGGGGCGTCA ATTTCATACAGATACCAACTACTCTGATGGCCCAGGTGGATTCATCTGTTGGCGGGAAAA CTGGGATTAACCACCCACTAGGGAAGAACTTGATTGGAGCATTCTACCAGCCACAATGTG TTCTAATTGACACAGATACACTGAACACATTGCCTGACAGGGAGCTAGCCTCAGGCATTG CCGAGGTAGTGAAGTATGGGCTCATAAGGGATGCACCATTCTTTGAGTGGCAAGAGAAAA ACATGCCTGAATTGTTAGCAAGAGAACCAAATGCTTTGGCCTATGCTATCAAGAGATCTT GTGAAAACAAAGCTGAGGTGGTCGCACAAGATGAGAAGGAAAGTGGCCTACGAGCAACAC TAAACCTGGGTCACACATTTGGCCATGTATGTGTTATCATGTTTGGATTTTTATGTCTGA TTATTTTTTACTGTCATTGATAAGGTTCGGGAGCAAGAACCTTAACCACCTTTATCACAT CAGGATTTATCAGAATTTTGGCAACCTTATGTTATTGTAATGCACCAACCATATACTGAT CCTCACAGTCGTTTGTCAGGCTATCGAGACTGGGACTGGATATGGAGCATGGCTCCATGG GGAGGCTGTCGCAACTGGAATAGTTAATCACTTGCAAATGCTTATACAGCCTCTTGTTAT TTTGTAGTGTTGTTTTCTTATCTTTTTCTTATGTTCCGGTGTGGAACTACCCTAGGTTAT GGCAGCTGATATGTCTCATCGCCTGGGGTGGATAGATGACTCCATAAAAGAACGTGTGTT TGCCATACTAAAGCAAGCCAAACTTCCCATTGCACCTCCAGAGACCATGACCGTGGAGAA GTTTAAAAACATCATTGCTGTTGACAAGAAGGTTGCTGATGGTCTGTTGAGACTCATCCT TCTGAAAGGACCACTAGGGCGCTGTGTCTTTACCGGGGATTATGACCGGAATGCGCTCGA TGAAACCCTTCACGCATTCTGCAACAACTGACCCATCTCAGTTTTGGACTTCACTTCTGT ATGCTAATACTAGGCCATGTATATCCATCAAAGAAAAGATTGCGATGTAC