Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006227_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:2:202364749:202368567:1 gene:Zm00001d006227 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein XAP5 CIRCADIAN TIMEKEEPER
Sequence	ATGTCGGGTTTCGGCGATGGGTACGTGGGGACGGCGCAGGACGCGGTGAAGATCCGGCGG CTGGAGAAGCAGCGCGAGGCGGAGCGCCGCAAGATCGAGGAGCTCAAGAACAAGTCCGCG GACGGGCAGCCCGGCCTCCTCCAGTTCGGCTCCAGCACCTCCGAGATTCTTGAGACTGCA TTTAAGAAGGAAACAGTTGGTCTCGTCACCAGGGAGCAGTATGTCGAGAAGAGGGTTAAC ATTCGAACCAAGATTGAGGAGGAAGAGAAAGAGAAACTTCAAAAGCTGCAACAAGAAGAA GAAGAATTGCAAATGCAGAAAAGGAAAAAGAGGAGAGTGAAGAGTGATCCACGCTTATCT TTCTGTGATGACATTGAGAATGGAAGTGACGAAGATGATTTTGAGAATCAAGAAACCAAG AAAAATGGCCCTGCCAAACTTGGGAAGGATCCAACTGTGGAGACAAGTTTTCTACCTGAT AGAGAAAGGGAGGCAGAGGAACAAGCAGAACGAGAACGACTGAAGAAGCAGTGGTCGCAT GAGCAGGAATTGATTAAAAATGAACCTCTTTCAATTACTTACAGTTACTGGGATGGGACT GGGCACAGAAGAGCAATCCAGGTCCGTAAAGGTGACACCATTGGAGAATTTCTAAGGGCT GTTCAACAGCAGCTTGCCCCTGAATTCCGTGAAGTACGGACAACTTCAGTTGAGAATCTA CTTTATGTGAAGGAAGATCTTATCATCCCTCATCAACACAGCTTTTATGAATTAATTATC AACAAAGCAAGGGGCAAGAGTGGACCACTTTTCCATTTTGACGTTCATGAGGATGTTCGT ACCATTGCCGACGCAACAAAAGAAAAGGATGAGTCCCACGCGGGGAAAGTTGTAGAGAGG CATTGGTATGAGAAAAATAAGCATATATTCCCAGCCTCAAGATGGGAGATCTATGACCCA ACGAAGAAGTGGGAACGCTACACAATCCATGGGGATTAG

Peptide Sequence

PEP ID	Zm00001d006227_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:2:202364749:202368567:1 gene:Zm00001d006227 transcript:Zm00001d006227_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein XAP5 CIRCADIAN TIMEKEEPER
Sequence	MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNKSADGQPGLLQFGSSTSEILETA FKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVKSDPRLS FCDDIENGSDEDDFENQETKKNGPAKLGKDPTVETSFLPDREREAEEQAERERLKKQWSH EQELIKNEPLSITYSYWDGTGHRRAIQVRKGDTIGEFLRAVQQQLAPEFREVRTTSVENL LYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVER HWYEKNKHIFPASRWEIYDPTKKWERYTIHGD

Transcript Sequence

Transcript ID	Zm00001d006227_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:202364749:202368567:1 gene:Zm00001d006227 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein XAP5 CIRCADIAN TIMEKEEPER
Sequence	AGGCCGCAGTTGTAGGTACAGGGACAAATCCCCGGTTCTTTCTCCACCCTCCGACCGGCC GGCGGCCGCTGCAAGTTTCACCGCAGTTGGCAACTGGCAACCCCGCTCTGACCTAGGAGG ATGTCGGGTTTCGGCGATGGGTACGTGGGGACGGCGCAGGACGCGGTGAAGATCCGGCGG CTGGAGAAGCAGCGCGAGGCGGAGCGCCGCAAGATCGAGGAGCTCAAGAACAAGTCCGCG GACGGGCAGCCCGGCCTCCTCCAGTTCGGCTCCAGCACCTCCGAGATTCTTGAGACTGCA TTTAAGAAGGAAACAGTTGGTCTCGTCACCAGGGAGCAGTATGTCGAGAAGAGGGTTAAC ATTCGAACCAAGATTGAGGAGGAAGAGAAAGAGAAACTTCAAAAGCTGCAACAAGAAGAA GAAGAATTGCAAATGCAGAAAAGGAAAAAGAGGAGAGTGAAGAGTGATCCACGCTTATCT TTCTGTGATGACATTGAGAATGGAAGTGACGAAGATGATTTTGAGAATCAAGAAACCAAG AAAAATGGCCCTGCCAAACTTGGGAAGGATCCAACTGTGGAGACAAGTTTTCTACCTGAT AGAGAAAGGGAGGCAGAGGAACAAGCAGAACGAGAACGACTGAAGAAGCAGTGGTCGCAT GAGCAGGAATTGATTAAAAATGAACCTCTTTCAATTACTTACAGTTACTGGGATGGGACT GGGCACAGAAGAGCAATCCAGGTCCGTAAAGGTGACACCATTGGAGAATTTCTAAGGGCT GTTCAACAGCAGCTTGCCCCTGAATTCCGTGAAGTACGGACAACTTCAGTTGAGAATCTA CTTTATGTGAAGGAAGATCTTATCATCCCTCATCAACACAGCTTTTATGAATTAATTATC AACAAAGCAAGGGGCAAGAGTGGACCACTTTTCCATTTTGACGTTCATGAGGATGTTCGT ACCATTGCCGACGCAACAAAAGAAAAGGATGAGTCCCACGCGGGGAAAGTTGTAGAGAGG CATTGGTATGAGAAAAATAAGCATATATTCCCAGCCTCAAGATGGGAGATCTATGACCCA ACGAAGAAGTGGGAACGCTACACAATCCATGGGGATTAGCATGGAACATCATACATAGAG AGTTAAATTATTTTGTACTTTGGATGTCCGAAATTACCAGCACTCAAGAATATGAGAATG GCACAAGTGACGATTTGAATAGCATAAATTATTACTGTTGTTTGCAAACATGTCCTGCAT AGAGTACTAGGTAAAGCCTCTTTCTCACACTCCAAATATGTTGCTTTAACTATTAAAGGG GCAAGAGTACTACC