Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006214_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:2:201993697:202008246:-1 gene:Zm00001d006214 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lon protease homolog 2 peroxisomal
Sequence	ATGTGGGAGGAATCCTTGTTTTTGCAGATTGTTTTGATTTTTTACTTGGTTTGTAACTTT GTCGGTGTGATTGTTTGCCTCTCCAGTGTGAAGTTGGTGGAGCAAGAGCTCTGGCAGAAG GAAGATAAAGGACTGATCGGGGTACTTCCTGTGCGGGACTCGGAGGCAACAGCTATTGGC TCTTTGCTGTCTCCTGGTGTGGGCAGTGATTCAGGCGGAGGAGGCAGTAAGGCCGTCGGT TCTGCAGGAGAGTCATCAAAGCAGCACCTAAAAAATGGGAAGGAGCCCATTCAGTGGCAC ACCAAGGGAGTTGCTGCCAGAGCTTTACACCTTTCCAGAGGGGTGGAGAAGCCAAGTGGA AGGGTTACATACATTGTTGTTCTTGAAGGTCTATGTAGGTTCAGCGTTCAGGAACTAAAT GCAAGAGGACCATACCATTTTGCCCGTGTTTCGCGCCTTGACATGACAAAGACTGAATTG GAGCATGCAGAGCAAGACGCAGATCTTATTGCTCTTTCTAGGCAGTTTAAAGCTACTGCC ATGGAACTAATTTCTGTACTTGAACAGAAGCAGAAGACAGTTGGTAGGACAAAGGTGCTC CTTGATACGGTTCCTGTTTACAGGCTAGCTGATATTTTTGTTGCTAGCTTTGAGATAAGT TTTGAGGAGCAGCTTTCAATGCTGGATTCAGTTGACTTGAAAGTTAGACTTTCAAAGGCA AATGAACTTGTAGATAGACACTTGCAGTCCATTCTTGTAGCTGAAAAAATAACTCAAAAG GTTGAGGGGCAGCTATCAAAGTCACAAAAAGAGTTTCTACTGCGCCAACAGATGAGGGCC ATAAAAGAGGAACTTGGCGATAACGATGATGAAGAAGATGATGTGGCTGCACTGGAAAGA AAGATGCAGAATGCAGGAATGCCTGCTAATATTTGGAAGCTTGCTCAAAGGGAAATGAGG CGCCTACGAAAGATGCAACCTCAGCAACCTGGTTATAGTAGCTCTCGAGCCTACTTGGAA CTTCTTGCTGACCTTCCTTGGCAAAAGGTCAGTGAAGAAAGGGAGCTTGACCTTAGAGCT GCAAAAGAGAGCCTTGACCAGGATCATTATGGACTAACAAAAGTTAAGCAAAGGATTATT GAGTATTTGGCTGTTCGTAAGCTCAAACCTGATGCCAGGGGTCCAGTGCTGTGTTTTGTT GGACCACCTGGTGTTGGGAAGACTTCTTTGGCCTCCTCCATAGCAAAGGCCCTGAACAGA AAATTCTTAAGAATCTCTCTTGGTGGTGTAAAAGATGAAGCTGATATTAGGGGCCACCGA AGGACATACATTGGAAGCATGCCAGGGAGACTTATTGATGGACTAAAGAGGGTATCTGTG AGCAATCCAGTGATGCTTCTAGATGAAATTGACAAGACTGGTTCTGATGTACGTGGTGAT CCAGCATCAGCACTACTGGAAGTTCTTGATCCTGAGCAGAACAAAGCATTCAACGATCAC TATTTGAATGTGCCGTTCGACCTGTCGAAAGTCATATTTGTTGCAACTGCCAATAAGATG CAACCTATACCCCCTCCTCTGTTAGATAGGATGGAAGTCATTGAGCTGCCAGGCTACACA CCTGAAGAGAAGTTAAAAATAGCCATGAAACATCTCATACCAAGGGTATTGGAGCAGCAT GGCTTGAGTACGGCAAATCTTCAGATTCCTGAGGCTATGGTCAAACTGATCATCGAGAGG TACACTAGAGAAGCTGGTGTGCGCAATCTTGAGCGGAACCTAGCTGCATTGGCCCGTGCA GCTGCTGTTAAGGTTGCAGAGCAAGTTAAAACTCTTAGACTTGGCAAGGAAATACAACCA ATCACTACAACTCTTCTTGATTCGAGGCTTGCTGATGGTGGTGAAGTTGAAATGGAAGTT ATTCCCATGGGGCATGATATGTCAAACACTTATGAAAATCCATCTCCTATGACTGTTGAT GAGGCTATGCTAGAAAAAGTACTTGGGCCTCCTAGATTTGATGATACAGAAGCTGCAGAT CGTGTAGCAAGCCCAGGAGTATCAGTTGGCCTTGTCTGGACTTCGGTTGGTGGGGAAGTT CAGTTTGTGGAGGCTACAGCCATGGTGGGCAAGGGTGACTTGCATTTGACTGGGCAGCTT GGTGATGTTATTAAGGAGTCAGCACAGTTAGCTTTGACATGGGTGAGAGCAAGAGCTGCT GACCTCAATTTGTCACCTGCTTCTGATATCAACTTATTGGAGAGCCGTGATATTCACATA CATTTTCCAGCTGGTGCTGTGCCAAAGGATGGCCCTTCTGCAGGCGTGACATTGGTAACG GCACTGGTGTCACTTTTTAGTAACAGAAAAGTCAGAGCAGATACTGCTATGACTGGAGAG ATGACTCTAAGGGGCATTGTATTGCCAGTTGGTGGTGTTAAGGACAAGGTACTTGCGGCA CATCGTTATGGAATCAAGAGAGTAATTTTACCTGAAAGGAACCTGAAGGACTTATCAGAG GTTCCATCACCGATTCTCTCTGGCATGGAGATTCTGCTTGTGAAACACATCGAGGACGTA CTCGACCATGCTTTCGAAGGCGGATGTCCACTTAAATCACGCTCCAAGTTATAG

Peptide Sequence

PEP ID	Zm00001d006214_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:2:201993697:202008246:-1 gene:Zm00001d006214 transcript:Zm00001d006214_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lon protease homolog 2 peroxisomal
Sequence	MWEESLFLQIVLIFYLVCNFVGVIVCLSSVKLVEQELWQKEDKGLIGVLPVRDSEATAIG SLLSPGVGSDSGGGGSKAVGSAGESSKQHLKNGKEPIQWHTKGVAARALHLSRGVEKPSG RVTYIVVLEGLCRFSVQELNARGPYHFARVSRLDMTKTELEHAEQDADLIALSRQFKATA MELISVLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKA NELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDEEDDVAALER KMQNAGMPANIWKLAQREMRRLRKMQPQQPGYSSSRAYLELLADLPWQKVSEERELDLRA AKESLDQDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNR KFLRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGD PASALLEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANKMQPIPPPLLDRMEVIELPGYT PEEKLKIAMKHLIPRVLEQHGLSTANLQIPEAMVKLIIERYTREAGVRNLERNLAALARA AAVKVAEQVKTLRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGHDMSNTYENPSPMTVD EAMLEKVLGPPRFDDTEAADRVASPGVSVGLVWTSVGGEVQFVEATAMVGKGDLHLTGQL GDVIKESAQLALTWVRARAADLNLSPASDINLLESRDIHIHFPAGAVPKDGPSAGVTLVT ALVSLFSNRKVRADTAMTGEMTLRGIVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLSE VPSPILSGMEILLVKHIEDVLDHAFEGGCPLKSRSKL

Transcript Sequence

Transcript ID	Zm00001d006214_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:201993697:202008246:-1 gene:Zm00001d006214 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lon protease homolog 2 peroxisomal
Sequence	GATTTTGGGTTTGGGGATTAATTTGGTGCGCGTTCGGCGTATCGGGCTCAAGGTTTTCTG TTTAGGGAGTTTATTTTCTTTATATTGGTTTTATCCCCATCGCAACTGTTTTGTAGACAC GTGGTCTGTGTTACGTCTAATTACCCACACTTGCTACGAAATAGCGACTCCTTGCCTTCA ATTTTGAAGCAGTATGCGAATTAAGTAAATTTGGTATCTCGCTTCAGACGGAAAATTTTG AAATTTGTGGTTTTCAGTGGGCTGTTTGCTTTTGAGGGCCGGCAGATTCCGCGTCCGTTT TCCACCTTCCCGTTAGTGTCCTACTTTTCTACGCGCAGTTTGGTCCCTTGTGGTTGAGCT TTCCTTCGGAGTCGACTTACTATTATGTATATTGACTATGTGGGAGGAATCCTTGTTTTT GCAGATTGTTTTGATTTTTTACTTGGTTTGTAACTTTGTCGGTGTGATTGTTTGCCTCTC CAGTGTGAAGTTGGTGGAGCAAGAGCTCTGGCAGAAGGAAGATAAAGGACTGATCGGGGT ACTTCCTGTGCGGGACTCGGAGGCAACAGCTATTGGCTCTTTGCTGTCTCCTGGTGTGGG CAGTGATTCAGGCGGAGGAGGCAGTAAGGCCGTCGGTTCTGCAGGAGAGTCATCAAAGCA GCACCTAAAAAATGGGAAGGAGCCCATTCAGTGGCACACCAAGGGAGTTGCTGCCAGAGC TTTACACCTTTCCAGAGGGGTGGAGAAGCCAAGTGGAAGGGTTACATACATTGTTGTTCT TGAAGGTCTATGTAGGTTCAGCGTTCAGGAACTAAATGCAAGAGGACCATACCATTTTGC CCGTGTTTCGCGCCTTGACATGACAAAGACTGAATTGGAGCATGCAGAGCAAGACGCAGA TCTTATTGCTCTTTCTAGGCAGTTTAAAGCTACTGCCATGGAACTAATTTCTGTACTTGA ACAGAAGCAGAAGACAGTTGGTAGGACAAAGGTGCTCCTTGATACGGTTCCTGTTTACAG GCTAGCTGATATTTTTGTTGCTAGCTTTGAGATAAGTTTTGAGGAGCAGCTTTCAATGCT GGATTCAGTTGACTTGAAAGTTAGACTTTCAAAGGCAAATGAACTTGTAGATAGACACTT GCAGTCCATTCTTGTAGCTGAAAAAATAACTCAAAAGGTTGAGGGGCAGCTATCAAAGTC ACAAAAAGAGTTTCTACTGCGCCAACAGATGAGGGCCATAAAAGAGGAACTTGGCGATAA CGATGATGAAGAAGATGATGTGGCTGCACTGGAAAGAAAGATGCAGAATGCAGGAATGCC TGCTAATATTTGGAAGCTTGCTCAAAGGGAAATGAGGCGCCTACGAAAGATGCAACCTCA GCAACCTGGTTATAGTAGCTCTCGAGCCTACTTGGAACTTCTTGCTGACCTTCCTTGGCA AAAGGTCAGTGAAGAAAGGGAGCTTGACCTTAGAGCTGCAAAAGAGAGCCTTGACCAGGA TCATTATGGACTAACAAAAGTTAAGCAAAGGATTATTGAGTATTTGGCTGTTCGTAAGCT CAAACCTGATGCCAGGGGTCCAGTGCTGTGTTTTGTTGGACCACCTGGTGTTGGGAAGAC TTCTTTGGCCTCCTCCATAGCAAAGGCCCTGAACAGAAAATTCTTAAGAATCTCTCTTGG TGGTGTAAAAGATGAAGCTGATATTAGGGGCCACCGAAGGACATACATTGGAAGCATGCC AGGGAGACTTATTGATGGACTAAAGAGGGTATCTGTGAGCAATCCAGTGATGCTTCTAGA TGAAATTGACAAGACTGGTTCTGATGTACGTGGTGATCCAGCATCAGCACTACTGGAAGT TCTTGATCCTGAGCAGAACAAAGCATTCAACGATCACTATTTGAATGTGCCGTTCGACCT GTCGAAAGTCATATTTGTTGCAACTGCCAATAAGATGCAACCTATACCCCCTCCTCTGTT AGATAGGATGGAAGTCATTGAGCTGCCAGGCTACACACCTGAAGAGAAGTTAAAAATAGC CATGAAACATCTCATACCAAGGGTATTGGAGCAGCATGGCTTGAGTACGGCAAATCTTCA GATTCCTGAGGCTATGGTCAAACTGATCATCGAGAGGTACACTAGAGAAGCTGGTGTGCG CAATCTTGAGCGGAACCTAGCTGCATTGGCCCGTGCAGCTGCTGTTAAGGTTGCAGAGCA AGTTAAAACTCTTAGACTTGGCAAGGAAATACAACCAATCACTACAACTCTTCTTGATTC GAGGCTTGCTGATGGTGGTGAAGTTGAAATGGAAGTTATTCCCATGGGGCATGATATGTC AAACACTTATGAAAATCCATCTCCTATGACTGTTGATGAGGCTATGCTAGAAAAAGTACT TGGGCCTCCTAGATTTGATGATACAGAAGCTGCAGATCGTGTAGCAAGCCCAGGAGTATC AGTTGGCCTTGTCTGGACTTCGGTTGGTGGGGAAGTTCAGTTTGTGGAGGCTACAGCCAT GGTGGGCAAGGGTGACTTGCATTTGACTGGGCAGCTTGGTGATGTTATTAAGGAGTCAGC ACAGTTAGCTTTGACATGGGTGAGAGCAAGAGCTGCTGACCTCAATTTGTCACCTGCTTC TGATATCAACTTATTGGAGAGCCGTGATATTCACATACATTTTCCAGCTGGTGCTGTGCC AAAGGATGGCCCTTCTGCAGGCGTGACATTGGTAACGGCACTGGTGTCACTTTTTAGTAA CAGAAAAGTCAGAGCAGATACTGCTATGACTGGAGAGATGACTCTAAGGGGCATTGTATT GCCAGTTGGTGGTGTTAAGGACAAGGTACTTGCGGCACATCGTTATGGAATCAAGAGAGT AATTTTACCTGAAAGGAACCTGAAGGACTTATCAGAGGTTCCATCACCGATTCTCTCTGG CATGGAGATTCTGCTTGTGAAACACATCGAGGACGTACTCGACCATGCTTTCGAAGGCGG ATGTCCACTTAAATCACGCTCCAAGTTATAGCATCCAACTCGCCTTTGCTATGGATATTT GCTTCGGAGGATCATCGTCAACAGTACCACGAATGGTCAACAGTCAGAATAAGAGCCTAG CTCTCTTGCCAGCACAGGTCTTGACACGCCCATTTTTGTTAGGCTTCGCATCTGAATGTG TATACTGGTCAGAATTCGGAGAGCAGTCAGAAGATCTGCTCGTTCACCTGCTGGGACTCA TTGCATAGTTTCTCGACACCAGCTGTTGATGTTTATGCACAGATGCAACAGAAATCAGGG AGGAATTACGCTGGTTGGTTTCTCTGTCGTGGGTGTATATATGTATGTATGCATGTAATC TAATCCAGGGAAATATAGCTACAACAAGGTTGTCAAAACTAAAGACATCGAGAAACATCA CACGTCCTTTGGGCTTGGGTG