Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006210_T021
CDS Infomation	cds chromosome:B73_RefGen_v4:2:201907183:201911490:-1 gene:Zm00001d006210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	ATGGATTTGGTTCATAAAGATGATGAAGCACATGTTAAGCAGGAGAATGCCGCTATTGAG CGATCAAAAGCTGTCGATTCTGCTGTGCTTGGAAAATACAGCATATGGCGAAAAGAGAAC GAGAATTCAGATTCTACAGTTAGGCTGATGAGGGACCAAATTATTATGGCTCGTGTCTAT TCTGCGCTTGCTAAATCAAAGAACAAGAGTGATCTATATCAAAAACTGCAGACCCGAATC AAGGAAAGCCAGCGGGCTGTTGGAGATGCTTCTGCTGATGCTGGCCTGCATCACAGCGCA CCTGAGAAAATCATAGCGATGGGTCAAGTTTTATCAAAGGCTAGAGAAGAAGTTTATAAT TGTATGGCAATCACTCAGAAACTAAGGGCTATGCTTCAGTCAGCAGATGAACAGGTCAGG TGCTTGAAGAAGCAGAGTACATTTCTTAGCCAATTGGCTGCAAAGACAATTCCAAACAGC ATTCACTGCTTGTCTATGCGTTTGACGATTGATTACTATCTCCTCCTCCTTGAGGAACGA AAATTTCCAAGGAGTGAAAATTTAGAAAATCCAAATCTCTATCACTATGCACTTTTCTCA GATAATGTCTTGGCAGCTTCTGTTGTTGTGAACTCAACCATCATGACTTTTCAGAAACCA GAGAAACATGTTTTCCATCTTGTGACTGACAAGTTAAACTTTGGAGCCATGAACATGTGG TTTCTGCTGAACCCACCTGGCAAGGCTACCATCCATGTTGAGAATGTGGACGAATTTAAG TGGTTGAACTCATCATACTGTCCTGTGTTGCGGCAACTTGAGTCTGCTGCCATGAAAGAG TACTATTTCAAAGCTGATCGGCCCACCAGTCTCTCAGCAGGTTCTTCAAACCTAAAGTAT CGGAACCCCAAGTACCTCTCTATGCTGAACCACTTGAGGTTCTATCTCCCAGAGGTCTAT CCAAAGGTGGATAAGATACTCTTCCTCGACGATGACATAGTTGTGCAGAAAGATTTGACA GGGTTGTGGGATGTTAATCTTAATGGAAAGGTCAATGGTGCTGTGGAAACCTGTGGGGAG AGTTTCCACCGTTTTGACAAGTATCTCAATTTTTCAAATCCACACATTGCTCGGAACTTT GATCCAAATGCATGTGGCTGGGCTTATGGGATGAACATCTTTGATCTGAAGGAGTGGAAG AAGAAAGATATTACTGGGATCTACCACAAATGGCAAAATATGAATGAAGGCAGAGTTCTT TGGAAGCTTGGGACACTTCCGCCTGGCCTCTTGACCTTCTACAAGTTGACGCACCCACTG GACAAGTCATGGCATGTTCTTGGACTAGGATACAACCCAAGCGTAGACCGTTCAGAGATA GACAGTGCTGCTGTTGTTCATTACAATGGGAACATGAAGCCATGGTTGGAGCTAGCAATG ACCAAATACCGACCATATTGGACCAGGTATATCAAGTATGATCACCCTTACATCCGTGGA TGCAACTTGAGGGAGTAG

Peptide Sequence

PEP ID	Zm00001d006210_P021
PEP Infomation	pep chromosome:B73_RefGen_v4:2:201907183:201911490:-1 gene:Zm00001d006210 transcript:Zm00001d006210_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	MDLVHKDDEAHVKQENAAIERSKAVDSAVLGKYSIWRKENENSDSTVRLMRDQIIMARVY SALAKSKNKSDLYQKLQTRIKESQRAVGDASADAGLHHSAPEKIIAMGQVLSKAREEVYN CMAITQKLRAMLQSADEQVRCLKKQSTFLSQLAAKTIPNSIHCLSMRLTIDYYLLLLEER KFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMTFQKPEKHVFHLVTDKLNFGAMNMW FLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTSLSAGSSNLKY RNPKYLSMLNHLRFYLPEVYPKVDKILFLDDDIVVQKDLTGLWDVNLNGKVNGAVETCGE SFHRFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNMNEGRVL WKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSVDRSEIDSAAVVHYNGNMKPWLELAM TKYRPYWTRYIKYDHPYIRGCNLRE

Transcript Sequence

Transcript ID	Zm00001d006210_T021
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:201907183:201911490:-1 gene:Zm00001d006210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	ACTCCGGCGAAGCGAAGCGTAGGCACACTGCTCTCCGGCGAGCAGCCAGCCGCCGGCGGA TCGGATCCGGATCTCGACCAGCACTGGCATTGCCGCGACGGAGATGCCGACCCCGAAGCA GCGGCTCCCCTGCTCGACCTTCGGCCGAGGCGGAGGAGGGAGGCGCGCCGCCTGCGGCTC CGCCGTGCTGCCACCCGTGGTGGTCCTCGTGTTCCTGTTCGTGGTCGCGCCTTCGCTCTT CTTCGTCGTGCGCAATGGCGGTCGCGGCTACGGCCACGGCCACGTAGCCGTAGCCTCCGG TCCGATTCGCGTTCAGGAACCAACGGCAATGAAGAACCTCAAATCTTTTTTGCCTAAGGA GGTGTGTTTGATGCTATAACTGCTAGACAACAAGAATCAGACACTTTGAGTCTTGATTTT TTTAGGAATCACGCATCGCCCTCTTGGAAAACTAATGATCTAGTCACTGAGAAGAGCATG GATGTCGATGACAAGGCTAAAGCTGAAATCAGTTTGCCAGAACATGATCTACCAACAAAT AGATCACCCAAAGATCCAGATGAACATCAAGCTGACAATGCAGCAAAAGTAGCTTGTAGA AACTTAGGGAGACAAGGCGCGAGAAGAGAGCAATGGATTTGGTTCATAAAGATGATGAAG CACATGTTAAGCAGGAGAATGCCGCTATTGAGCGATCAAAAGCTGTCGATTCTGCTGTGC TTGGAAAATACAGCATATGGCGAAAAGAGAACGAGAATTCAGATTCTACAGTTAGGCTGA TGAGGGACCAAATTATTATGGCTCGTGTCTATTCTGCGCTTGCTAAATCAAAGAACAAGA GTGATCTATATCAAAAACTGCAGACCCGAATCAAGGAAAGCCAGCGGGCTGTTGGAGATG CTTCTGCTGATGCTGGCCTGCATCACAGCGCACCTGAGAAAATCATAGCGATGGGTCAAG TTTTATCAAAGGCTAGAGAAGAAGTTTATAATTGTATGGCAATCACTCAGAAACTAAGGG CTATGCTTCAGTCAGCAGATGAACAGGTCAGGTGCTTGAAGAAGCAGAGTACATTTCTTA GCCAATTGGCTGCAAAGACAATTCCAAACAGCATTCACTGCTTGTCTATGCGTTTGACGA TTGATTACTATCTCCTCCTCCTTGAGGAACGAAAATTTCCAAGGAGTGAAAATTTAGAAA ATCCAAATCTCTATCACTATGCACTTTTCTCAGATAATGTCTTGGCAGCTTCTGTTGTTG TGAACTCAACCATCATGACTTTTCAGAAACCAGAGAAACATGTTTTCCATCTTGTGACTG ACAAGTTAAACTTTGGAGCCATGAACATGTGGTTTCTGCTGAACCCACCTGGCAAGGCTA CCATCCATGTTGAGAATGTGGACGAATTTAAGTGGTTGAACTCATCATACTGTCCTGTGT TGCGGCAACTTGAGTCTGCTGCCATGAAAGAGTACTATTTCAAAGCTGATCGGCCCACCA GTCTCTCAGCAGGTTCTTCAAACCTAAAGTATCGGAACCCCAAGTACCTCTCTATGCTGA ACCACTTGAGGTTCTATCTCCCAGAGGTCTATCCAAAGGTGGATAAGATACTCTTCCTCG ACGATGACATAGTTGTGCAGAAAGATTTGACAGGGTTGTGGGATGTTAATCTTAATGGAA AGGTCAATGGTGCTGTGGAAACCTGTGGGGAGAGTTTCCACCGTTTTGACAAGTATCTCA ATTTTTCAAATCCACACATTGCTCGGAACTTTGATCCAAATGCATGTGGCTGGGCTTATG GGATGAACATCTTTGATCTGAAGGAGTGGAAGAAGAAAGATATTACTGGGATCTACCACA AATGGCAAAATATGAATGAAGGCAGAGTTCTTTGGAAGCTTGGGACACTTCCGCCTGGCC TCTTGACCTTCTACAAGTTGACGCACCCACTGGACAAGTCATGGCATGTTCTTGGACTAG GATACAACCCAAGCGTAGACCGTTCAGAGATAGACAGTGCTGCTGTTGTTCATTACAATG GGAACATGAAGCCATGGTTGGAGCTAGCAATGACCAAATACCGACCATATTGGACCAGGT ATATCAAGTATGATCACCCTTACATCCGTGGATGCAACTTGAGGGAGTAGTAGATATAGT CGTGCTGAAACACTGACAGATGAGGACGAGCCTGCTGGACAGAAGTGTTCCATGTCCTTG CGGTG