Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006177_T039
CDS Infomation	cds chromosome:B73_RefGen_v4:2:200734993:200742515:-1 gene:Zm00001d006177 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:generative cell specific1 description:Protein HAPLESS 2
Sequence	ATGTTGTTTGGGCACTCTGTGTTCCATGTTTTTGGAATTGGAACAAGGTCACTTGGGTTC AACATCAGGGTACAAGTTAAGAAAGGTTCATCTGTATCGGAGGTTGTTGTTGGTCCAGAG AATAGAACTGTTGTTTCTAAAGACAACTTTCTGAGAGTGAATCTCATTGGTGATTTTGGT GGTTATACCAGCATCCCAGCATTTGAGGACTTCTATCTTGTGACCCCTAGGAAGAGTGCT GGTAGTGGTGAGCCACAAAACCTTGGTGCTGAATATAGAAAGTGGATGCTGTTGGAGAGA GTTCGTTTTACAGACGGTGTCGAATGTAACAAGATTGGTGTTGGTTATGAGGCTTTCCAA AACCAACCTAACTTTTGTGCATCGCCATTTGAGAGCTGTTTGAACAATCAGCTATGGACC TTTTTGGAGTCTGACAAAAACCGGATAAGCATGAGCCGACAGCCCCAATATGTTGTGCAG GGAAGGTTTCAGAGGATCAATCAACATCCAGATGCAAGTGTTCATTCTTTTTCTATTGGA GTGACAGAAGTTATTAATAGCAATTTACGGATAGAGCTGAGTGCTGATGACATAGAATAC ATGTATCAGAGGAGTCCAGGGAATATAACAGACATTAGTGTTCCAGCATTTGAAGTCTTA AGTCAATATGGTACTGCAAAGGTCACAACTAAGAATATTGGTACACTGGAGGCTTCGTAT ACCTTGACATTTCACTGCTCAAGTGGCATCAGTTTTATGGAGGAGCAGTACTATATCCTC AAACCGAATGAAGAGAGTACCCGTTTATTTTACTTGCACGCATCTACAGATCAAGCAGCA AAGTATCAATGTACAGCTATTCTGAAGGCGTCGGATTCTAGTGAACTCGACAGACAAGAA TGTGTTTTTTCTACTACGGCTACAGTTCTTGATAATGGAACACAGATTATCGGTTCAAAT GGCTACAAATTGGGTTTCTTTGACACCATCAAAGGCTATTTGGTTAGCTTCTGGGATTTT CTGATTGATTTAATCAGTGGCAAATCCTGCAGGCTGAACAAATGTCGGAGCTTTTTTGAC TTCAGCTGCCATGCGCAGTACAGATGCATAACCTGGCTCGTCATGTTGGTGCTGCTACTT TTTATGTTACCCGCAGGCGCAATTGTCCTGTATCTTCTTCATCAGAAAGGCTTCTTCGAC CCAGTATACGACTGGTGGGATGACCTGCTGGGGGCGGACTACCGCGCGCACCGGAGGCAC AAGAAAGGCCGCCGCCACCACCATCACCACCACGACCACCATCACCACCGGCACCACCAC CACCACGGGCACTCGCACGGCCATGACCACCACCCCCACAGTCACCACCACGCGCACCAG AGGAGAAAGATCGAGCCCAGCCACCACCACGTCCTACACAGGCAGCAGCCCGGGACAGCG GCAGAAGGCCACCGGCACAAGCACGACCCGGCGCTCGGCGTGCAGCACAGGGAGGCCGGG CACTTGGGGCACAAGCGTCGGCATGGCAAAGCGGTGGTCGCGGAGGACGCCCTGGACCTG GAGTTCAGGGAACGAAGGCCATACGAGGTCAGGCATGCCGGGCACCTGCACCGCGACCAC CACCACCACCACCACTCCTGGGAAGTGTAG

Peptide Sequence

PEP ID	Zm00001d006177_P039
PEP Infomation	pep chromosome:B73_RefGen_v4:2:200734993:200742515:-1 gene:Zm00001d006177 transcript:Zm00001d006177_T039 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:generative cell specific1 description:Protein HAPLESS 2
Sequence	MLFGHSVFHVFGIGTRSLGFNIRVQVKKGSSVSEVVVGPENRTVVSKDNFLRVNLIGDFG GYTSIPAFEDFYLVTPRKSAGSGEPQNLGAEYRKWMLLERVRFTDGVECNKIGVGYEAFQ NQPNFCASPFESCLNNQLWTFLESDKNRISMSRQPQYVVQGRFQRINQHPDASVHSFSIG VTEVINSNLRIELSADDIEYMYQRSPGNITDISVPAFEVLSQYGTAKVTTKNIGTLEASY TLTFHCSSGISFMEEQYYILKPNEESTRLFYLHASTDQAAKYQCTAILKASDSSELDRQE CVFSTTATVLDNGTQIIGSNGYKLGFFDTIKGYLVSFWDFLIDLISGKSCRLNKCRSFFD FSCHAQYRCITWLVMLVLLLFMLPAGAIVLYLLHQKGFFDPVYDWWDDLLGADYRAHRRH KKGRRHHHHHHDHHHHRHHHHHGHSHGHDHHPHSHHHAHQRRKIEPSHHHVLHRQQPGTA AEGHRHKHDPALGVQHREAGHLGHKRRHGKAVVAEDALDLEFRERRPYEVRHAGHLHRDH HHHHHSWEV

Transcript Sequence

Transcript ID	Zm00001d006177_T039
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:200734993:200742515:-1 gene:Zm00001d006177 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:generative cell specific1 description:Protein HAPLESS 2
Sequence	GCTTGGGCGGCGCTAACCGTCGTCTCCTCCTCTTCCTCCCCTCTCTACCTCGCCGCCGTC GGAGCTAGCCGGCGGGTTGTTCGCCCGGCTCGTGAGGAAGGCGGCGGTGGGGCGTTTCGG CGTGTCGTGGCTCGCGGCGGCGGTGGCCTGTGCTCGCGCGCACGCCAACGGCGGTGGCAT TGCTGTGCTCCAACGCGTGGCCGACCGGTTTGGTAAGCATGGCGGTGGTGGTGACGAACA ACAGGGCGAGAGCGGAGCTGGCGTGGCTGCAGTGGCGGGAGCAGGTGCCCCGGAGTTAGC TGATGGCTTGCTCGCGGCGGCGGTGTGGCTCACGCGCCTGCTCTTCCGTCGAGTAGTGGC ATCCCCGGCAATCGCTCTTGAGGCTGGCTCGCGGCGCCGCTCGCGTGTTCGCTGCGTGCG CGGCAACACACGCGGGGAGGAGTGGGCTATGTGGGCTTTGGTCGGCGGCGGATCTGGCAT TGTCGGCGGATCTAGGCCCCATCGGCCTAGATATGGCCCACCCTCAACTGATCTACGCCT TGGCGATGGTTGTCATTGCGGGGTGCATGTTGGTGCGCAACGGAGGCGGTGCGCCCGGCG ACAGCTGGTTTCGATGTCGCGGGTGCCAGGGCCAGTGGCGGTAGCTCAAGCTGGTTTCAG CTCTGGCGAGTGGGCAGTGTGGCGCACAAGGCAAGGTGTTCCCTGGTTCCATGTGCCCAA CCGGAAGGGATGGCAGCCGGCGCAGCTTTGCGGCTGCTGCGGCAGCCGGCACGGTGCCCC TCTGGAGGGGTGTGTGCGGAGGCAAGGGCGGTGGCGACGACAGAGGCTGCATGCTTTGAC CTAGGGTCCTGGACTAGCGATGAGATGGAGGGCATCTTGGACGAAAGCTTCGGCGACAGT GACGCCTGTGTGCGCCACTTCACTCTGTTGAGGGCGACGCATTGCTATGTCTTCCATGGG CGAAAGCCCGATCCATCTGGAATGTGACGGTGGCGTCCTGGATGTCACTCCCTTCCTAAA GGCGTCACGTTTGAGTCCGTCTTGGCCTCGACGTTGCCTTCGGTTGATGCTTTCGCTTCT CGACGTCTGGATTGCGGGTCGAGGTGGGATTTTTTGAAACATGAAGTCGAAGCTGCCACA TTAGGAGATGTGGCTCGTTAACGATGACATGAGGCGAACCTCCTTCTTCGTGGTTTGGAT TGTTTTGGAGGTCGAGCAAAAAACTGGAGGTGGGTGTTGGATCAAGATAGTTGGTGAAGA ATCGGAGCTGCCTCGAGTGTGGGTGTGTTGAGGCTTAGCAACGATGGCGTGTCACGGTCT TCCTCCTTCTGTGCCAGGTTTTAGGTGTAGGTGCCTTCGTGTTTCTTTTGACCGTGTGCG GCCCGTCTGGTGAAGTTGGAGCTGCCCGTACCTTGTGTTGAGCTCGGCAACGGTGACTCT GTATGGGCTTTGTGTGTGGGGTTGCCGCTGCTTATGTTGTTTGGGCACTCTGTGTTCCAT GTTTTTGGAATTGGAACAAGGTCACTTGGGTTCAACATCAGGGTACAAGTTAAGAAAGGT TCATCTGTATCGGAGGTTGTTGTTGGTCCAGAGAATAGAACTGTTGTTTCTAAAGACAAC TTTCTGAGAGTGAATCTCATTGGTGATTTTGGTGGTTATACCAGCATCCCAGCATTTGAG GACTTCTATCTTGTGACCCCTAGGAAGAGTGCTGGTAGTGGTGAGCCACAAAACCTTGGT GCTGAATATAGAAAGTGGATGCTGTTGGAGAGAGTTCGTTTTACAGACGGTGTCGAATGT AACAAGATTGGTGTTGGTTATGAGGCTTTCCAAAACCAACCTAACTTTTGTGCATCGCCA TTTGAGAGCTGTTTGAACAATCAGCTATGGACCTTTTTGGAGTCTGACAAAAACCGGATA AGCATGAGCCGACAGCCCCAATATGTTGTGCAGGGAAGGTTTCAGAGGATCAATCAACAT CCAGATGCAAGTGTTCATTCTTTTTCTATTGGAGTGACAGAAGTTATTAATAGCAATTTA CGGATAGAGCTGAGTGCTGATGACATAGAATACATGTATCAGAGGAGTCCAGGGAATATA ACAGACATTAGTGTTCCAGCATTTGAAGTCTTAAGTCAATATGGTACTGCAAAGGTCACA ACTAAGAATATTGGTACACTGGAGGCTTCGTATACCTTGACATTTCACTGCTCAAGTGGC ATCAGTTTTATGGAGGAGCAGTACTATATCCTCAAACCGAATGAAGAGAGTACCCGTTTA TTTTACTTGCACGCATCTACAGATCAAGCAGCAAAGTATCAATGTACAGCTATTCTGAAG GCGTCGGATTCTAGTGAACTCGACAGACAAGAATGTGTTTTTTCTACTACGGCTACAGTT CTTGATAATGGAACACAGATTATCGGTTCAAATGGCTACAAATTGGGTTTCTTTGACACC ATCAAAGGCTATTTGGTTAGCTTCTGGGATTTTCTGATTGATTTAATCAGTGGCAAATCC TGCAGGCTGAACAAATGTCGGAGCTTTTTTGACTTCAGCTGCCATGCGCAGTACAGATGC ATAACCTGGCTCGTCATGTTGGTGCTGCTACTTTTTATGTTACCCGCAGGCGCAATTGTC CTGTATCTTCTTCATCAGAAAGGCTTCTTCGACCCAGTATACGACTGGTGGGATGACCTG CTGGGGGCGGACTACCGCGCGCACCGGAGGCACAAGAAAGGCCGCCGCCACCACCATCAC CACCACGACCACCATCACCACCGGCACCACCACCACCACGGGCACTCGCACGGCCATGAC CACCACCCCCACAGTCACCACCACGCGCACCAGAGGAGAAAGATCGAGCCCAGCCACCAC CACGTCCTACACAGGCAGCAGCCCGGGACAGCGGCAGAAGGCCACCGGCACAAGCACGAC CCGGCGCTCGGCGTGCAGCACAGGGAGGCCGGGCACTTGGGGCACAAGCGTCGGCATGGC AAAGCGGTGGTCGCGGAGGACGCCCTGGACCTGGAGTTCAGGGAACGAAGGCCATACGAG GTCAGGCATGCCGGGCACCTGCACCGCGACCACCACCACCACCACCACTCCTGGGAAGTG TAGGAATAGTTCTGACCGTCTGAACTTTAAGACATCTAGCGTAAGATGAAGTTGGTGTAC CGTGGGCACGGGACATGCCCTTTT