Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006118_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:2:199149321:199152831:1 gene:Zm00001d006118 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Sequence	ATGGAGCACACTAAGTCAGGCCCCAGCAGTTGGCCAGAACTGGCCGACGTGGTGCCGGTG CCGCAGGACGATGGGCCTAGCCCTGTGGTGTCCATCGCCTATCGAGATGACTTTCGTGAG GTCATGGATTACTTCCGCGCCCTCTACCTCACCGGTGAGCGAAGCCCTCGCGCTCTCCGC CTCACCGCCGAGGCCATCGAGCTCAACCCCGGCAACTACACTGTCTGGCATTTCCGGCGC CTTATTCTGGAGTCACTAGATTTTGATTTACTAGAGGAGATGAAATTTGTCGAAAAAATT GCTGAATGCAATCCAAAAAATTACCAAATCTGGCACCATAAGAGATGGCTTGCTGAGAAA TTAGGACCTGGTATTGCAAACAAAGAGCATGAATTCACAATGAAGATACTTGCTATTGAT GCAAAAAATTATCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCGTTGGGGGGATGG GAGACTGAATTAGAATACTGTGACCACTTACTTAAGGAAGACGTCTTCAATAATTCAGCT TGGAATCAGAGATACTTTGTTATAACAAGATCACCATTTCTTGGTGGCCTTGCGGCAATG CGTGATTCAGAAGTAGACTACACAATTGAAGCTATTCTAGCAAACGCTCAGAATGAAAGC CCCTGGAGGTACCTCAAGGGTCTATACAAGGGTGAGAATAACCTGCTAGTAGAGGACGAG CGCATCTCTGCTGTTTGTTTCAAGGTCCTGAAGAATGATTGGACTTGTGTATTTGCTTTG AGTTTGCTGCTCGATCTTCTCTGCACTGGTTTGCAGCCTTCAGATGAACTTAGGTCCACT CTTGAAACAATAAGGAGCTCCCATCCTGAAACCGCGGATGATGATCCTGCAGCCGCTGTT TGCTGTATCCTGCAGAAATGTGATCCCCTGCGGGTAAATTATTGGTCTTGGTTCAAGGAC ACTCTTTCTCAGATCTCATGA

Peptide Sequence

PEP ID	Zm00001d006118_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:2:199149321:199152831:1 gene:Zm00001d006118 transcript:Zm00001d006118_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Sequence	MEHTKSGPSSWPELADVVPVPQDDGPSPVVSIAYRDDFREVMDYFRALYLTGERSPRALR LTAEAIELNPGNYTVWHFRRLILESLDFDLLEEMKFVEKIAECNPKNYQIWHHKRWLAEK LGPGIANKEHEFTMKILAIDAKNYHAWSHRQWVLQALGGWETELEYCDHLLKEDVFNNSA WNQRYFVITRSPFLGGLAAMRDSEVDYTIEAILANAQNESPWRYLKGLYKGENNLLVEDE RISAVCFKVLKNDWTCVFALSLLLDLLCTGLQPSDELRSTLETIRSSHPETADDDPAAAV CCILQKCDPLRVNYWSWFKDTLSQIS

Transcript Sequence

Transcript ID	Zm00001d006118_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:199149321:199152831:1 gene:Zm00001d006118 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Sequence	ATCCTACCCTGCCTTGTCTTTTTGCATCACCTAAGAATGCCCCCCCCCCCCCCCCCCCCC CCAACGGCCATCGCTGTTGTCCTACTTCGCCAGCGATGAGCACCGCCTGGTATTCGCTCC CCTTGCTGTGCGAAACCGTGTGCCCAAACCTTGACGTAACTCGTAGATTTGGACAGCGCA ATTACTTAAGCTATTTGTATTCGGATCTGATCCAACCCTGGTGGTCAGCTGGACTCATCG CCCATGGAGCACACTAAGTCAGGCCCCAGCAGTTGGCCAGAACTGGCCGACGTGGTGCCG GTGCCGCAGGACGATGGGCCTAGCCCTGTGGTGTCCATCGCCTATCGAGATGACTTTCGT GAGGTCATGGATTACTTCCGCGCCCTCTACCTCACCGGTGAGCGAAGCCCTCGCGCTCTC CGCCTCACCGCCGAGGCCATCGAGCTCAACCCCGGCAACTACACTGTCTGGCATTTCCGG CGCCTTATTCTGGAGTCACTAGATTTTGATTTACTAGAGGAGATGAAATTTGTCGAAAAA ATTGCTGAATGCAATCCAAAAAATTACCAAATCTGGCACCATAAGAGATGGCTTGCTGAG AAATTAGGACCTGGTATTGCAAACAAAGAGCATGAATTCACAATGAAGATACTTGCTATT GATGCAAAAAATTATCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCGTTGGGGGGA TGGGAGACTGAATTAGAATACTGTGACCACTTACTTAAGGAAGACGTCTTCAATAATTCA GCTTGGAATCAGAGATACTTTGTTATAACAAGATCACCATTTCTTGGTGGCCTTGCGGCA ATGCGTGATTCAGAAGTAGACTACACAATTGAAGCTATTCTAGCAAACGCTCAGAATGAA AGCCCCTGGAGGTACCTCAAGGGTCTATACAAGGGTGAGAATAACCTGCTAGTAGAGGAC GAGCGCATCTCTGCTGTTTGTTTCAAGGTCCTGAAGAATGATTGGACTTGTGTATTTGCT TTGAGTTTGCTGCTCGATCTTCTCTGCACTGGTTTGCAGCCTTCAGATGAACTTAGGTCC ACTCTTGAAACAATAAGGAGCTCCCATCCTGAAACCGCGGATGATGATCCTGCAGCCGCT GTTTGCTGTATCCTGCAGAAATGTGATCCCCTGCGGGTAAATTATTGGTCTTGGTTCAAG GACACTCTTTCTCAGATCTCATGACTTCACATGGGTTCACCCCTTGTCCGCGCTGGTCCG GGCTCTGTGAGATAGACATGTTTTAGATAGTTTCATTGGACACCCAAACAGAGCGGACAG AGTGTATGGCTGCTACCTTCTCCGTGACTGAAAGCAGTGCTTGTAACGATTTTGTTTAGT AAAATTTGTGAGTGTTACTGCTCCAAACAACACCTTATGCAACCATATTTGAATATTTCA CATGTAAGCTTGAATCCAGGTGTGTTTGTTAATGTATTACAATTGCCATGGGAGCCTAAA TGAGACCCATAATCACTTCC