Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006112_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:198703657:198708355:1 gene:Zm00001d006112 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arabinogalactan protein

Sequence

ATGGCGGAGAACCCGCAGCTGTTTGGGAATGGGATGCCGGTGCCGTTCTACAGTGAGATG
TTCGTCCTCGCCCGGGATGGCGTCGAGTTCCACGTCGACAAGATCCCATCAGCTCCTGGT
GGTCATGTGAAAACAAAAGGCACAATTTACCTGTCTAATATAAGGATGGTGTTTGTTGCC
AACAAGCATGTTGGCAACTTCTTTGCTTTTGATATGCCACTGTTGTTTGTGCACGGTCAG
AAGTTCAATCAGCCAATATTTCACTGCAACAACATCTCTGGATTCGTTGAGCCAGTTGTT
CCAGACAACCAGAACAGGGCCCTGTACTCAACTCACACCTTCAAGGTCTTGTTCAAGGAC
GGCGGCTGTGGTACTTTCGTTCCTCTGTTCCTCAACCTGACTGCATCTGTGCGGCGCTAC
AACCAGTTTGAAACCCAGTCTGCTGCTAGCATGGCACCTCGTGTGGACCCTCTGCAAGCT
GTGCAGACTCCTGTTGATGACATGATGCGTCATGCGTGA

Peptide Sequence

PEP ID

Zm00001d006112_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:198703657:198708355:1 gene:Zm00001d006112 transcript:Zm00001d006112_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arabinogalactan protein

Sequence

MAENPQLFGNGMPVPFYSEMFVLARDGVEFHVDKIPSAPGGHVKTKGTIYLSNIRMVFVA
NKHVGNFFAFDMPLLFVHGQKFNQPIFHCNNISGFVEPVVPDNQNRALYSTHTFKVLFKD
GGCGTFVPLFLNLTASVRRYNQFETQSAASMAPRVDPLQAVQTPVDDMMRHA

Transcript Sequence

Transcript ID

Zm00001d006112_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:198703657:198708355:1 gene:Zm00001d006112 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arabinogalactan protein

Sequence

GTCTTCGCTCCGCGATCGATCCAGGAGGGGGAAGCAGAAGGAGGGATGGCGGAGAACCCG
CAGCTGTTTGGGAATGGGATGCCGGTGCCGTTCTACAGTGAGATGTTCGTCCTCGCCCGG
GATGGCGTCGAGTTCCACGTCGACAAGATCCCATCAGCTCCTGGTGGTCATGTGAAAACA
AAAGGCACAATTTACCTGTCTAATATAAGGATGGTGTTTGTTGCCAACAAGCATGTTGGC
AACTTCTTTGCTTTTGATATGCCACTGTTGTTTGTGCACGGTCAGAAGTTCAATCAGCCA
ATATTTCACTGCAACAACATCTCTGGATTCGTTGAGCCAGTTGTTCCAGACAACCAGAAC
AGGGCCCTGTACTCAACTCACACCTTCAAGGTCTTGTTCAAGGACGGCGGCTGTGGTACT
TTCGTTCCTCTGTTCCTCAACCTGACTGCATCTGTGCGGCGCTACAACCAGTTTGAAACC
CAGTCTGCTGCTAGCATGGCACCTCGTGTGGACCCTCTGCAAGCTGTGCAGACTCCTGTT
GATGACATGATGCGTCATGCGTGAGTGCTCACAACCAACCAAGCAACTGGCTATCAATCT
CTCCGTTGTGAACTCATGTGAGTTGATATATGTGCAGGTATGTTGACCCAAACGATCCTA
CCAAGATCTTCCTTCAGCAACCTGCGCCAGAATCGCAGCTGAGGAGGAGGAACTACCACG
GCCCAGCTGATGCAAATTAGCGCTTGGCTGGATTGGCAGAACTCATGCTCAATTAAGTGC
TGTGTCCATTTGAGCATTTCACAACTGACTTCAATATTCGGGTACCCCTGGGTCCTGTGA
CCTTACATATATAGTACATAATGTTGCGAGTTCTCGCAATATGTAATGTACATAAGTGGC
GTGTTCATATATTATTG