Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006098_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:198138267:198148545:1 gene:Zm00001d006098 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane fatty acid synthase

Sequence

ATGAGAGTGGCGGTGGTAGGCGCCGGCGTGAGCGGGCTGGCGGCGGCGCACGAGCTGGCG
AGGAGCGGCGGCTCCCGGGTGACCGTGTACGAGAAGGAGGACTACCTCGGTGGGCACGCC
AGGACCGTGGCCGTCGAGGACGCCGACGCCGCCAGCACCGTGCAGCTCGACCTCGGCTTC
ATGGTCTTCAACCGGGTAACATACCCAAACATGCTGGAGTGGTTTGAAGGGCTCGGTGTA
GAGATGGAGATATCCGACATGTCCTTCTCAGTGAGCACGGAATTGGGGGCCAGCGGCAGC
AGATGCGAGTGGGGCAGCCGCAATGGCATCTCAGGACTCTTGGCACAGAAAAGCAATGCA
CTCAGCCCTAGTTTCTGGCGCATGATTCGGGAGATACTCAAGTTCAAGAACGATGCTCTC
AGGTACTTGGAGGACCATGAAAACAACCCTGATATGGACCGGAATGAGACTCTCGGGCAA
TTCATTCGGTCTCATGGATATTCACAGTTCTTCCAAGAGGCTTACCTTACCCCGATCTGT
GCGTGTATATGGTCATGCCCATCGCAAGGAGTGTTGGGATTCTCTGCTTTCTTTGTGCTC
TCTTTCTGCCGTAACCATCATCTTCTTCAGTTGTTCGGTCGCCCCCAGTGGCTCACCGTG
AAGGGTCGTTCGCACTCCTATGTACACAAGGTAAGGGAGGAGTTGGAAAGTATGGGTTGC
CAAATTAAAACCAGCTGTGAAATCAAATCTGTTTCAAGTTCTGAGGGAGGTTTCAGGGTT
ACAGTGTTTGATGGTTCAGAGGAGACGTATGACAGAATCATATTTGGTGTCCATGCACCT
GATGCTCTAAAGATTCTAGGAGCTGAAGCAACACATGAAGAATTGAGGATCCTAGGAGCT
TTTCAGTACGTCTACAGTGATATATACCTCCACTCCGATAAAAGTTTGATGCCACGGAGT
TTGTCTGCTTGGAGTTCCTGGAACTTCCTGGGGACGACAAGCAAGGGGGTTTGTGTAACC
TACTGGCTAAATCTGCTTCAGAACATAGAATCTACAAGCAGACCTTTTCTGGTGACGCTG
AATCCTCCTCATGTCCCAGACCACGTCTTTCTTAAATGGTACACTAGCCACCCTGTCCCA
TCTGTGGCTGCCGCAAAGGCTTCTCTTGAGCTTCATCACATTCAAGGAAACAGAGGAATT
TGGTTTTGTGGGGCATACCAAGGTTATGGTTTCCATGAAGATGGACTCAAGGCTGGGAAA
GCTGCAGCTCAAGATTTGCTTGGTAAGGAGAGTGACCTTTTGGTGAACCCAAAACAGATG
ATCCCATCGTGGTCTGAGGCTGGGGCGCGTCTTCTGGTAACAAGATTTCTTGGTCAATAT
GTGTCTGTCGGCAACTTGGTCTTGCTTGAAGAAGGAGGCACTATGTTCAGTTTTGGTGAA
GTAGGCAAAAAATGCCATGTGAAATCTGTCCTGCGAGTACATGACCCCATGTTTTACTGG
AAGGTTGCAACTGAAGCAGACCTTGGCTTGGCAGATGCCTACATTAACGGTTATTTCTCA
TTTGTAGACAAGAGAGAAGGTCTTCTAAATCTTTTCCTGATTCTCATTGCGAACAGGGAC
GCAAACAAGAGTAGTAGCAGCGCTGCTGGTAAAAGGGGTTGGTGGACACCCCTGCTATTG
ACAGCTGGGGTTGCCTCCGCTAAATACTTCCTGCGTCACATAGCAAGGAGGAATTCTGTC
TCACAAACACGTCAAAACATCTCTCAACACTATGATCTGAGTAATGAATTCTTCTCTCTT
TTCCTGGATCCATCGATGACTTACTCTTGTGCCATCTTCAAGACGGAGGATCAAAGCTTA
GAGGCAGCCCAGCTACAGAAAGTTTGCCTCCTAATCGATAAGGCTAAAGTGGAGCGAGAT
CACCATGTTCTTGAGATTGGCTGTGGTTGGGGCAGCTTAGCAATCCAATTGGTGAAGCAA
ACTGGTTGCAAATACACTGGGATCACATTATCAGTGGAGCAATTGAAATATGCACAGAGA
AAGGTGAAAGAAGCTGGATTAGAGGACCACATAAGCTTCATGTTGTGTGATTACCGTCAA
ATACCAACTCAGCGCAAATACGACAGGATCATCTCTTGCGAGATGATCGAAGGTGTTGGG
CACGAATACATGGACGATTTCTTCGGCTGCTGCGAGTCCCTTTTGGCTCAAGACGGCATA
TTTGTCCTGCAGTTCATCTCAATCCCAGAAGAACGGTATGAGGAATACAGGCGCAGCTCA
GACTTCATCAAGGAATACATCTTCCCTGGGGGTTGCCTGCCTTCGTTAGCCCGGATCACG
TCTGCCATGTCTGCAGCATCAAGGCTCTGCATCGAGCACCTTGAGAATATTGGGTACCAT
TACTACCCAACGCTGATACAGTGGAGGGACAACTTCATGGCCAATAAGGATGCAATTTTG
GCCCTGGGCTTCGATGAGAAATTCATCCGTATATGGGAATACTACTTCATATACTGCGCC
GCTGGTTTCAAGTCACGGACACTTGGGAACTACCAGATTGTGTTTTCTCGCCCTGGCAAC
GACAAATTAGGTGACAGCGGTATACACTCCTTAAGCAAGCTTTCTGGCAGCTAA

Peptide Sequence

PEP ID

Zm00001d006098_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:198138267:198148545:1 gene:Zm00001d006098 transcript:Zm00001d006098_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane fatty acid synthase

Sequence

MRVAVVGAGVSGLAAAHELARSGGSRVTVYEKEDYLGGHARTVAVEDADAASTVQLDLGF
MVFNRVTYPNMLEWFEGLGVEMEISDMSFSVSTELGASGSRCEWGSRNGISGLLAQKSNA
LSPSFWRMIREILKFKNDALRYLEDHENNPDMDRNETLGQFIRSHGYSQFFQEAYLTPIC
ACIWSCPSQGVLGFSAFFVLSFCRNHHLLQLFGRPQWLTVKGRSHSYVHKVREELESMGC
QIKTSCEIKSVSSSEGGFRVTVFDGSEETYDRIIFGVHAPDALKILGAEATHEELRILGA
FQYVYSDIYLHSDKSLMPRSLSAWSSWNFLGTTSKGVCVTYWLNLLQNIESTSRPFLVTL
NPPHVPDHVFLKWYTSHPVPSVAAAKASLELHHIQGNRGIWFCGAYQGYGFHEDGLKAGK
AAAQDLLGKESDLLVNPKQMIPSWSEAGARLLVTRFLGQYVSVGNLVLLEEGGTMFSFGE
VGKKCHVKSVLRVHDPMFYWKVATEADLGLADAYINGYFSFVDKREGLLNLFLILIANRD
ANKSSSSAAGKRGWWTPLLLTAGVASAKYFLRHIARRNSVSQTRQNISQHYDLSNEFFSL
FLDPSMTYSCAIFKTEDQSLEAAQLQKVCLLIDKAKVERDHHVLEIGCGWGSLAIQLVKQ
TGCKYTGITLSVEQLKYAQRKVKEAGLEDHISFMLCDYRQIPTQRKYDRIISCEMIEGVG
HEYMDDFFGCCESLLAQDGIFVLQFISIPEERYEEYRRSSDFIKEYIFPGGCLPSLARIT
SAMSAASRLCIEHLENIGYHYYPTLIQWRDNFMANKDAILALGFDEKFIRIWEYYFIYCA
AGFKSRTLGNYQIVFSRPGNDKLGDSGIHSLSKLSGS

Transcript Sequence

Transcript ID

Zm00001d006098_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:198138267:198148545:1 gene:Zm00001d006098 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclopropane fatty acid synthase

Sequence

AGAGCGGCTGCTGCTGGCGAATCGACCTCCTGGGCCCGGGAAGAGATTGGGTACTGTAGA
GAGACCGGGTAGAGATAGAGAGGCCAGGATGAGAGTGGCGGTGGTAGGCGCCGGCGTGAG
CGGGCTGGCGGCGGCGCACGAGCTGGCGAGGAGCGGCGGCTCCCGGGTGACCGTGTACGA
GAAGGAGGACTACCTCGGTGGGCACGCCAGGACCGTGGCCGTCGAGGACGCCGACGCCGC
CAGCACCGTGCAGCTCGACCTCGGCTTCATGGTCTTCAACCGGGTAACATACCCAAACAT
GCTGGAGTGGTTTGAAGGGCTCGGTGTAGAGATGGAGATATCCGACATGTCCTTCTCAGT
GAGCACGGAATTGGGGGCCAGCGGCAGCAGATGCGAGTGGGGCAGCCGCAATGGCATCTC
AGGACTCTTGGCACAGAAAAGCAATGCACTCAGCCCTAGTTTCTGGCGCATGATTCGGGA
GATACTCAAGTTCAAGAACGATGCTCTCAGGTACTTGGAGGACCATGAAAACAACCCTGA
TATGGACCGGAATGAGACTCTCGGGCAATTCATTCGGTCTCATGGATATTCACAGTTCTT
CCAAGAGGCTTACCTTACCCCGATCTGTGCGTGTATATGGTCATGCCCATCGCAAGGAGT
GTTGGGATTCTCTGCTTTCTTTGTGCTCTCTTTCTGCCGTAACCATCATCTTCTTCAGTT
GTTCGGTCGCCCCCAGTGGCTCACCGTGAAGGGTCGTTCGCACTCCTATGTACACAAGGT
AAGGGAGGAGTTGGAAAGTATGGGTTGCCAAATTAAAACCAGCTGTGAAATCAAATCTGT
TTCAAGTTCTGAGGGAGGTTTCAGGGTTACAGTGTTTGATGGTTCAGAGGAGACGTATGA
CAGAATCATATTTGGTGTCCATGCACCTGATGCTCTAAAGATTCTAGGAGCTGAAGCAAC
ACATGAAGAATTGAGGATCCTAGGAGCTTTTCAGTACGTCTACAGTGATATATACCTCCA
CTCCGATAAAAGTTTGATGCCACGGAGTTTGTCTGCTTGGAGTTCCTGGAACTTCCTGGG
GACGACAAGCAAGGGGGTTTGTGTAACCTACTGGCTAAATCTGCTTCAGAACATAGAATC
TACAAGCAGACCTTTTCTGGTGACGCTGAATCCTCCTCATGTCCCAGACCACGTCTTTCT
TAAATGGTACACTAGCCACCCTGTCCCATCTGTGGCTGCCGCAAAGGCTTCTCTTGAGCT
TCATCACATTCAAGGAAACAGAGGAATTTGGTTTTGTGGGGCATACCAAGGTTATGGTTT
CCATGAAGATGGACTCAAGGCTGGGAAAGCTGCAGCTCAAGATTTGCTTGGTAAGGAGAG
TGACCTTTTGGTGAACCCAAAACAGATGATCCCATCGTGGTCTGAGGCTGGGGCGCGTCT
TCTGGTAACAAGATTTCTTGGTCAATATGTGTCTGTCGGCAACTTGGTCTTGCTTGAAGA
AGGAGGCACTATGTTCAGTTTTGGTGAAGTAGGCAAAAAATGCCATGTGAAATCTGTCCT
GCGAGTACATGACCCCATGTTTTACTGGAAGGTTGCAACTGAAGCAGACCTTGGCTTGGC
AGATGCCTACATTAACGGTTATTTCTCATTTGTAGACAAGAGAGAAGGTCTTCTAAATCT
TTTCCTGATTCTCATTGCGAACAGGGACGCAAACAAGAGTAGTAGCAGCGCTGCTGGTAA
AAGGGGTTGGTGGACACCCCTGCTATTGACAGCTGGGGTTGCCTCCGCTAAATACTTCCT
GCGTCACATAGCAAGGAGGAATTCTGTCTCACAAACACGTCAAAACATCTCTCAACACTA
TGATCTGAGTAATGAATTCTTCTCTCTTTTCCTGGATCCATCGATGACTTACTCTTGTGC
CATCTTCAAGACGGAGGATCAAAGCTTAGAGGCAGCCCAGCTACAGAAAGTTTGCCTCCT
AATCGATAAGGCTAAAGTGGAGCGAGATCACCATGTTCTTGAGATTGGCTGTGGTTGGGG
CAGCTTAGCAATCCAATTGGTGAAGCAAACTGGTTGCAAATACACTGGGATCACATTATC
AGTGGAGCAATTGAAATATGCACAGAGAAAGGTGAAAGAAGCTGGATTAGAGGACCACAT
AAGCTTCATGTTGTGTGATTACCGTCAAATACCAACTCAGCGCAAATACGACAGGATCAT
CTCTTGCGAGATGATCGAAGGTGTTGGGCACGAATACATGGACGATTTCTTCGGCTGCTG
CGAGTCCCTTTTGGCTCAAGACGGCATATTTGTCCTGCAGTTCATCTCAATCCCAGAAGA
ACGGTATGAGGAATACAGGCGCAGCTCAGACTTCATCAAGGAATACATCTTCCCTGGGGG
TTGCCTGCCTTCGTTAGCCCGGATCACGTCTGCCATGTCTGCAGCATCAAGGCTCTGCAT
CGAGCACCTTGAGAATATTGGGTACCATTACTACCCAACGCTGATACAGTGGAGGGACAA
CTTCATGGCCAATAAGGATGCAATTTTGGCCCTGGGCTTCGATGAGAAATTCATCCGTAT
ATGGGAATACTACTTCATATACTGCGCCGCTGGTTTCAAGTCACGGACACTTGGGAACTA
CCAGATTGTGTTTTCTCGCCCTGGCAACGACAAATTAGGTGACAGCGGTATACACTCCTT
AAGCAAGCTTTCTGGCAGCTAATAATGCGAGGATCTATATATATGTGGTGGTAGCTGGAT
CAGTCGGAGCCTACACACCTGAACTTGAGCCTTTTTATTTGTGATCGAATTGGACACGCA
GTGCTGTGTACACGTCGCTAACTAACTGTACTTGCAGCGGCGGATCATTCCATTGCTTCG
ATCCAATTTGACGTTTCATCACTTTCTGTTTCTGTTGGCGCAACGTAACTCCAATGATTA
ACCTTGGCACATGGCCGGCTGGGACGCAGGAGAGACTCGAGCATTCACTTTCGCTGGATA
TACATTTGTGTATTGTGTCCAGTCTCCAGACTCCAGCGCTGTATGATGAGCTCAAGAACG
TAGATATATTGTCGTCAGAGTAAGACACCACGGTACCAAAGTGCTAGGAAAAATCAGAGA
TATAGAAAGATAGAGGAGCGCAGACCTAAAACCGCTGGATCAGAGTATCGATATAGCTGT
ATGCACACGTACAATATAAAGAGGTTTGGACTCTTAAG