Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006079_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:197544668:197551476:-1 gene:Zm00001d006079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 2
Sequence	ATGGGGAAGAACGAGAAGGCTAAGCGCAAGAACCCTCGGAAAGCGCATGAACGGGATCTT CCAGCCTCGTCCTCGGAGGTTGGACCTGGTGATGCAGCATCGCAGGATGCAAGCCACTCA GCAGAGGAAGCAGCTGCTTCGGCTAATGGCCGGGAGCATTGCGGCCACTATGGCCGTGAC AATGCCCACTTAGATAAGGTCCTCCTGGAGATCTTGTCTTCCAAGCACGTTGCTTCATGT GAGCACTGCCGAGAAGATGCACCAAGAAAGAAAGGGGGTGCTGGTAGCAGGGAGAAAGGG GGTAAGCAGAAGAAGAAAGGAGGCGCCTCCAAAGGCGCTACTGCCAAGGCACAGGCAAAG GCAGACACAAGTCATACATGGGTCTGCTTGGACTGTGGTCGGCATTTTTGTGGTGGTGCA GCAGATGATACCAAGCCCTATGGCCATGCCAGACGGCATGCTAAGCAGGACCGGCATTGG TGGGCCGCAAGGTATGATGACCCAACAGTTGCTTATTGTTTGTCATGTGAAAAGGAGGTG TCAGTTGAGATGCCCAAATTAGAGACAGTTGTTGCACCAGCAGTGGAAGATAAGGTGGCC GGTGCAGCGGATACTGATTTATGTGGTTTGGTTAACCCGGATGCTAATGTGATCAAAGGA CTTCCAAATCTGGGAAATACATGCTTCTTCAATGCAGTGCTGCAGAGCATCCTCGCGGTT GATAGGTTGCGCAGGAAGATGTTAGGACCAGATGTTCCTACAGGAGCCCTTGCTATGTCA CTGAAGAAGCTTTTTGCAGAGACAAGTGCTTCAAACCATGCAGGAGGCATGCTAAGCCCG AAGAACCTCTTCTCAAGCATTTGCTCAAAATATCCACAGTTCAGGGGCTACCAGATGCAG GATAGCCATGAATTGCTCCGTTGTTTTCTTGATGGTTTACGCATGGAGGAAACTGAAGCA CGGAAGCTAGCAGAGGAAGCTTCAGATGCAGGTGTTCCCACAATTGTGGACTCCATTTTT GGTGGTCAGCTATCTAGTACTGTGTCCAGCACAGAATGCTCACACAGTTCCGTTAAACAT GATCAATTCCTTGACCTCTCACTACCAGTTCCATCAAGGAGACCTCCAACCAAGAGTGTT TCATCACCACCAGTTAAGAGGACCAAACAGTCCATACGAGATAGGAACAAAAACCGCAGA TACGGGAAGGTTCCAGCTCGAGCATCTCCTTCAGTAGAGAGTAACAAAGAACAAGTTCAT TCAATTGCTGAGCGCAATTCCCAAATTCCTGGTTCAGAACTTGAACAGGTAGTCAGCGAA AAAGATGCTGAGCCCTCTGGATGCAGTGAGTCATGTGGTTCTGTGCCTAATCAAGAACAA AATGCCACTACAAATGTGGAGAATAGCATCTGCTGGTTGGATTATGTCGCTGATGCGGAT GAAACAAAATCTGAGATTCTTGATTCTGCAGATTCTACTGAAACAGGACAAATTTGGGAA TGCAGGGATGCTGCACATGGTCCCTTGCACCCTCAGGATGATGCCCTACCCAAAGAGCAG ATCTTGGGTTCTGAGCACTCAGGCGAAAACACTGTTGATGATGATGCCTCCTTACAGACT GTTATCTTACTTCCTTACAAAGAATTTGGTACTACTGCCAAGGAAAGGGATGAAGCCATA GAAAATCCATATAATTCAGAGTGTACAGTTCCTCCTTTAGTTGTTTCTCCAGTAAGAGAA AATAATACACAACCTGAATATTGTGGAGATGTGGAGCAAGATGACTATGTTGGTCTTGGT GATATGTTCAATGAACCAGAAGTTACTTCTGAAGTCAAGAAAGAAGCTGGTAAAGTAGAA GATATTGATGTAATGGCTTGGAGTAGTAACAGTGCTGATGATGAGGTAGATGATAGTAAT GCTCCTGTATCAGTTGAGGGATGCTTGGCTGTGTATACTGAACCAGAGCTGCTTTCTGAA CCATGGCTTTGTGAGCACTGTACTAATGCTGCACGCATAAACTCTAATGAAAGAGAAAAT GTCATGGAGATGAAGGACCGAGCTAATGAAATAAAGGATGGTGAGGAGATGATGGCAGAT GGCGATGGAAAAAAAGATGGTGAGAAGTTGATCGTGAGCTGCAGCAAACAGGTGGACATT GATCAGGTTATGGGAACTGATGGTTGCAAAAAGCACATTGACCAGATTATGGCAACTGGT GATTGCTCTGACAATATGCATTCTGATATGCATTGCAAGGAAGGTGGGTGTGTTAATCCT TCTTCGGCTGACCCTGAACAAAAATGTGATGGCAATTTTCCAGATATAGAAAATACTTCT ATGCAGAGAACTGATGTAGTCTTCACTATGAATGAGACTGAACAATCAAGCAGTCAGACT AGCCACAAGGAACAGTGTATGGATTTGAAAAGCTTAGAACCGGAGTCCTCATCTTTGAAT AACCAACAACATGATTCATCTGTCCAATATAATGATTGTCATAACGTGGATATAACCGTT AAAGGAGCAAGTGCACCACTGAGTTGTGGCGATTCTGTGTCTTGCAATGCAACTAACAAT GTTGAAGCTCAACCTGTTGGTGGTGCTGAAGAAGTTGTGTCGAGTAGCCTTCCATCAGAT GCACAAAAAACCTTGCTGGGTGCAAAAGATAATGAAGATGCCATCACAAAGAATCAGGGC AGGAGGAAGCGAATGAAGATGGTTGGTAAGGCACAGCTAGTGCAAGGTAACCAAAATAAG CAGAAAGAGGACGAGACAAAGGTTTTCAGAGCTGCATTGAGAAGAATTCTTATAAGCAAA TCTCCACCTGTATTGACGATTAACTTGAACAGATTCAGCCAGGATTCTCATGGTCGATAT AAGAAACTGAAAGGGCATGTGCGCTTTAATGAGATGCTTGATATACAACCATTCATGGAC CCAAGGTGTAAGGTGAACAACTCCAGCACTTATCGTCTAGTTGGCGTTGTCGAGCACTTG GGAACCATGACGTCAGGTCATTATATTGCATACGCGAGAGCTTGCAAGATTGGAGGTCGG CAGCAGCAGAGCAGTGGCTCAAAGTCTTGGTTTTACGCAAGCGATGGGCAAGTCAGAGAA GCCTCTCTGGAGGAGGTGCTAAACTGCGAGGCCTACATTCTCTTTTACGAGAGGGTGGGC GACTAA

Peptide Sequence

PEP ID	Zm00001d006079_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:197544668:197551476:-1 gene:Zm00001d006079 transcript:Zm00001d006079_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 2
Sequence	MGKNEKAKRKNPRKAHERDLPASSSEVGPGDAASQDASHSAEEAAASANGREHCGHYGRD NAHLDKVLLEILSSKHVASCEHCREDAPRKKGGAGSREKGGKQKKKGGASKGATAKAQAK ADTSHTWVCLDCGRHFCGGAADDTKPYGHARRHAKQDRHWWAARYDDPTVAYCLSCEKEV SVEMPKLETVVAPAVEDKVAGAADTDLCGLVNPDANVIKGLPNLGNTCFFNAVLQSILAV DRLRRKMLGPDVPTGALAMSLKKLFAETSASNHAGGMLSPKNLFSSICSKYPQFRGYQMQ DSHELLRCFLDGLRMEETEARKLAEEASDAGVPTIVDSIFGGQLSSTVSSTECSHSSVKH DQFLDLSLPVPSRRPPTKSVSSPPVKRTKQSIRDRNKNRRYGKVPARASPSVESNKEQVH SIAERNSQIPGSELEQVVSEKDAEPSGCSESCGSVPNQEQNATTNVENSICWLDYVADAD ETKSEILDSADSTETGQIWECRDAAHGPLHPQDDALPKEQILGSEHSGENTVDDDASLQT VILLPYKEFGTTAKERDEAIENPYNSECTVPPLVVSPVRENNTQPEYCGDVEQDDYVGLG DMFNEPEVTSEVKKEAGKVEDIDVMAWSSNSADDEVDDSNAPVSVEGCLAVYTEPELLSE PWLCEHCTNAARINSNERENVMEMKDRANEIKDGEEMMADGDGKKDGEKLIVSCSKQVDI DQVMGTDGCKKHIDQIMATGDCSDNMHSDMHCKEGGCVNPSSADPEQKCDGNFPDIENTS MQRTDVVFTMNETEQSSSQTSHKEQCMDLKSLEPESSSLNNQQHDSSVQYNDCHNVDITV KGASAPLSCGDSVSCNATNNVEAQPVGGAEEVVSSSLPSDAQKTLLGAKDNEDAITKNQG RRKRMKMVGKAQLVQGNQNKQKEDETKVFRAALRRILISKSPPVLTINLNRFSQDSHGRY KKLKGHVRFNEMLDIQPFMDPRCKVNNSSTYRLVGVVEHLGTMTSGHYIAYARACKIGGR QQQSSGSKSWFYASDGQVREASLEEVLNCEAYILFYERVGD

Transcript Sequence

Transcript ID	Zm00001d006079_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:197544668:197551476:-1 gene:Zm00001d006079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 2
Sequence	ACTGACCGAGCGAGAATCGGAGAGCCCTTTCGGCTTTGGCTCTTTTAGTAGAAGTAGAGA TACTCAGGTTCAGTTCAGCACGCGTGCGCTGTCTCCCTCTCTCTTCGCGACGACTGTGCG ACCGCCGCCGCCGACCTACGCCAGGTTCCCCGATCTTCGTTGGGCGCTTCGCCGGCGACG AGCACCCATCAGGTGTATATTTGTAATCCTATGCCCTTTACTGGGTCCGCCCCTGGTTGA TTCTAGCCCTGTTCAGGAGTGATGGGGAAGAACGAGAAGGCTAAGCGCAAGAACCCTCGG AAAGCGCATGAACGGGATCTTCCAGCCTCGTCCTCGGAGGTTGGACCTGGTGATGCAGCA TCGCAGGATGCAAGCCACTCAGCAGAGGAAGCAGCTGCTTCGGCTAATGGCCGGGAGCAT TGCGGCCACTATGGCCGTGACAATGCCCACTTAGATAAGGTCCTCCTGGAGATCTTGTCT TCCAAGCACGTTGCTTCATGTGAGCACTGCCGAGAAGATGCACCAAGAAAGAAAGGGGGT GCTGGTAGCAGGGAGAAAGGGGGTAAGCAGAAGAAGAAAGGAGGCGCCTCCAAAGGCGCT ACTGCCAAGGCACAGGCAAAGGCAGACACAAGTCATACATGGGTCTGCTTGGACTGTGGT CGGCATTTTTGTGGTGGTGCAGCAGATGATACCAAGCCCTATGGCCATGCCAGACGGCAT GCTAAGCAGGACCGGCATTGGTGGGCCGCAAGGTATGATGACCCAACAGTTGCTTATTGT TTGTCATGTGAAAAGGAGGTGTCAGTTGAGATGCCCAAATTAGAGACAGTTGTTGCACCA GCAGTGGAAGATAAGGTGGCCGGTGCAGCGGATACTGATTTATGTGGTTTGGTTAACCCG GATGCTAATGTGATCAAAGGACTTCCAAATCTGGGAAATACATGCTTCTTCAATGCAGTG CTGCAGAGCATCCTCGCGGTTGATAGGTTGCGCAGGAAGATGTTAGGACCAGATGTTCCT ACAGGAGCCCTTGCTATGTCACTGAAGAAGCTTTTTGCAGAGACAAGTGCTTCAAACCAT GCAGGAGGCATGCTAAGCCCGAAGAACCTCTTCTCAAGCATTTGCTCAAAATATCCACAG TTCAGGGGCTACCAGATGCAGGATAGCCATGAATTGCTCCGTTGTTTTCTTGATGGTTTA CGCATGGAGGAAACTGAAGCACGGAAGCTAGCAGAGGAAGCTTCAGATGCAGGTGTTCCC ACAATTGTGGACTCCATTTTTGGTGGTCAGCTATCTAGTACTGTGTCCAGCACAGAATGC TCACACAGTTCCGTTAAACATGATCAATTCCTTGACCTCTCACTACCAGTTCCATCAAGG AGACCTCCAACCAAGAGTGTTTCATCACCACCAGTTAAGAGGACCAAACAGTCCATACGA GATAGGAACAAAAACCGCAGATACGGGAAGGTTCCAGCTCGAGCATCTCCTTCAGTAGAG AGTAACAAAGAACAAGTTCATTCAATTGCTGAGCGCAATTCCCAAATTCCTGGTTCAGAA CTTGAACAGGTAGTCAGCGAAAAAGATGCTGAGCCCTCTGGATGCAGTGAGTCATGTGGT TCTGTGCCTAATCAAGAACAAAATGCCACTACAAATGTGGAGAATAGCATCTGCTGGTTG GATTATGTCGCTGATGCGGATGAAACAAAATCTGAGATTCTTGATTCTGCAGATTCTACT GAAACAGGACAAATTTGGGAATGCAGGGATGCTGCACATGGTCCCTTGCACCCTCAGGAT GATGCCCTACCCAAAGAGCAGATCTTGGGTTCTGAGCACTCAGGCGAAAACACTGTTGAT GATGATGCCTCCTTACAGACTGTTATCTTACTTCCTTACAAAGAATTTGGTACTACTGCC AAGGAAAGGGATGAAGCCATAGAAAATCCATATAATTCAGAGTGTACAGTTCCTCCTTTA GTTGTTTCTCCAGTAAGAGAAAATAATACACAACCTGAATATTGTGGAGATGTGGAGCAA GATGACTATGTTGGTCTTGGTGATATGTTCAATGAACCAGAAGTTACTTCTGAAGTCAAG AAAGAAGCTGGTAAAGTAGAAGATATTGATGTAATGGCTTGGAGTAGTAACAGTGCTGAT GATGAGGTAGATGATAGTAATGCTCCTGTATCAGTTGAGGGATGCTTGGCTGTGTATACT GAACCAGAGCTGCTTTCTGAACCATGGCTTTGTGAGCACTGTACTAATGCTGCACGCATA AACTCTAATGAAAGAGAAAATGTCATGGAGATGAAGGACCGAGCTAATGAAATAAAGGAT GGTGAGGAGATGATGGCAGATGGCGATGGAAAAAAAGATGGTGAGAAGTTGATCGTGAGC TGCAGCAAACAGGTGGACATTGATCAGGTTATGGGAACTGATGGTTGCAAAAAGCACATT GACCAGATTATGGCAACTGGTGATTGCTCTGACAATATGCATTCTGATATGCATTGCAAG GAAGGTGGGTGTGTTAATCCTTCTTCGGCTGACCCTGAACAAAAATGTGATGGCAATTTT CCAGATATAGAAAATACTTCTATGCAGAGAACTGATGTAGTCTTCACTATGAATGAGACT GAACAATCAAGCAGTCAGACTAGCCACAAGGAACAGTGTATGGATTTGAAAAGCTTAGAA CCGGAGTCCTCATCTTTGAATAACCAACAACATGATTCATCTGTCCAATATAATGATTGT CATAACGTGGATATAACCGTTAAAGGAGCAAGTGCACCACTGAGTTGTGGCGATTCTGTG TCTTGCAATGCAACTAACAATGTTGAAGCTCAACCTGTTGGTGGTGCTGAAGAAGTTGTG TCGAGTAGCCTTCCATCAGATGCACAAAAAACCTTGCTGGGTGCAAAAGATAATGAAGAT GCCATCACAAAGAATCAGGGCAGGAGGAAGCGAATGAAGATGGTTGGTAAGGCACAGCTA GTGCAAGGTAACCAAAATAAGCAGAAAGAGGACGAGACAAAGGTTTTCAGAGCTGCATTG AGAAGAATTCTTATAAGCAAATCTCCACCTGTATTGACGATTAACTTGAACAGATTCAGC CAGGATTCTCATGGTCGATATAAGAAACTGAAAGGGCATGTGCGCTTTAATGAGATGCTT GATATACAACCATTCATGGACCCAAGGTGTAAGGTGAACAACTCCAGCACTTATCGTCTA GTTGGCGTTGTCGAGCACTTGGGAACCATGACGTCAGGTCATTATATTGCATACGCGAGA GCTTGCAAGATTGGAGGTCGGCAGCAGCAGAGCAGTGGCTCAAAGTCTTGGTTTTACGCA AGCGATGGGCAAGTCAGAGAAGCCTCTCTGGAGGAGGTGCTAAACTGCGAGGCCTACATT CTCTTTTACGAGAGGGTGGGCGACTAAGACAAGCTCTGTGCCAGCCTGCTCTTCAGTCAG TCAGTCATTTATCAGAGCAAGATCACTGGGGGGGGGGGGGGGGGGGGGTGGCAAACTGGG AATTGAAGACAACATTTTTTTTGTGGGCACAGCCCAATGAGTTTGCATACTAATGTAGCT ACCCACCAAGTCCATTCTGTTCCTTCGACCGAGTCATTCCATGGCCCGAGGTGGCTCCAT TACCATTCATCTGCTCGGTCGAAGAGATTTTCGCAATTGGACTTGCACAGCAGAACTGTT CATACTCGCCTACATCCATTCTTTCTTTTCCCCCCTTTTTGGCCTTTGAAGAACATAGCT GGTGGTGCGGGGATTGGTCAAAATTGGCAGGGTTTTTTTGTCGAACGGTTCATGGTCAGC TTGAGACATTTCTTCGGCATGTGGATGCCCCTAGATTTTGAGTGATGGGGGCACTGTAAA ACGGCTTTAGGAGCTATCCTGTAGTTGCAACAATCGCAGTCGTTTTCACACAGCGTCGCC CGAAGTGATTGTATCTGAGAGATGTTTATATATATGATCAGATTCTTTTTTGTTATGGAT TTCCCGCTTGAGATTTTATTTTTCT