Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006046_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:2:196381487:196403384:-1 gene:Zm00001d006046 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain111 description: methyl binding domain111
Sequence

ATGGAAACTTCTAAATCTCCTCAATCGTCAAAGAACAGTCATATTGTGGTGCCTTCTGAT
AGTAATGGCCCCCGATTTGACAATGATGGTTTTTCTTCAGAAGCTGCATCAAATCAAATG
GTCGTTTTCAACTCTGAAGCAGGAGATAAAGAGCAAGATGAACTGGGGGAAAACCGTTTG
CAGAAGTCAATCATAACAAGGGGAATATCGCCATCTATTGGAGCATTCACTGTCCAATGT
GCTAAATGTTTTAAATGGAGGCTTATTCCAACGAAAGAGAAGTATGAAGAAATTCGTGAA
CGTATTATAGAGGAACCTTTTGTATGCAAAAGAGCTCGTGAATGGAGACCTGATGTAACA
TGCAATGACCCAGAAGATATATCTCAGGATGGTAGCAGGCTTTGGGCTATTGACAAACCC
AATATTGCACAACCCCCTCGCGGATGGGAAAGGCAGATTAGGATAAGAGGTGAAGGGGGT
ACCAAATTTGCTGATGTATACTATACCTCTCCTACTGGAAGGAAACTTAGGTCTCTGGTT
GAAGTCGATAGGTTCCTCCAAGAGAATCCGGAGTATGGTGCTCAGGGTGTAACTTTAGCT
CAGTTTTCGTTCCAGATACCTAGACCTCTACGGCAGGACTATGTGAAAAAGAAACCGAAG
TTGATAAATCCAAGTGATGAAGCAATGAAACCCATAGCCTGGGCAGTTGCTACAAAACAC
GAGGGCGATGCCAGTGAAGAAGCTTCTCTCACCGATGAGGCACCTACATCAGAAGTCATG
CTAGCCCGGAAGAGAAAAGCAGGAAGCTCTTTGTCGATAGAGCCAAACCATCTCTCTGAT
GAACTTGAACCAAAGCTGGAGGATGCTTAG

Peptide Sequence

PEP ID

Zm00001d006046_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:2:196381487:196403384:-1 gene:Zm00001d006046 transcript:Zm00001d006046_T015 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain111 description: methyl binding domain111
Sequence

METSKSPQSSKNSHIVVPSDSNGPRFDNDGFSSEAASNQMVVFNSEAGDKEQDELGENRL
QKSIITRGISPSIGAFTVQCAKCFKWRLIPTKEKYEEIRERIIEEPFVCKRAREWRPDVT
CNDPEDISQDGSRLWAIDKPNIAQPPRGWERQIRIRGEGGTKFADVYYTSPTGRKLRSLV
EVDRFLQENPEYGAQGVTLAQFSFQIPRPLRQDYVKKKPKLINPSDEAMKPIAWAVATKH
EGDASEEASLTDEAPTSEVMLARKRKAGSSLSIEPNHLSDELEPKLEDA

Transcript Sequence

Transcript ID

Zm00001d006046_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:196381487:196403384:-1 gene:Zm00001d006046 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:methyl binding domain111 description: methyl binding domain111
Sequence

GTGCACCAGGCAGGCAGGCACCGCACGAGGCCTCCATTTGGACCACCGGGACCAGAACCC
GATCGGGCACGGCGGAGAACGCGAGTACCCAGGCTCTAATAATTTGTACAAAACCGATGG
AAACTTCTAAATCTCCTCAATCGTCAAAGAACAGTCATATTGTGGTGCCTTCTGATAGTA
ATGGCCCCCGATTTGACAATGATGGTTTTTCTTCAGAAGCTGCATCAAATCAAATGGTCG
TTTTCAACTCTGAAGCAGGAGATAAAGAGCAAGATGAACTGGGGGAAAACCGTTTGCAGA
AGTCAATCATAACAAGGGGAATATCGCCATCTATTGGAGCATTCACTGTCCAATGTGCTA
AATGTTTTAAATGGAGGCTTATTCCAACGAAAGAGAAGTATGAAGAAATTCGTGAACGTA
TTATAGAGGAACCTTTTGTATGCAAAAGAGCTCGTGAATGGAGACCTGATGTAACATGCA
ATGACCCAGAAGATATATCTCAGGATGGTAGCAGGCTTTGGGCTATTGACAAACCCAATA
TTGCACAACCCCCTCGCGGATGGGAAAGGCAGATTAGGATAAGAGGTGAAGGGGGTACCA
AATTTGCTGATGTATACTATACCTCTCCTACTGGAAGGAAACTTAGGTCTCTGGTTGAAG
TCGATAGGTTCCTCCAAGAGAATCCGGAGTATGGTGCTCAGGGTGTAACTTTAGCTCAGT
TTTCGTTCCAGATACCTAGACCTCTACGGCAGGACTATGTGAAAAAGAAACCGAAGTTGA
TAAATCCAAGTGATGAAGCAATGAAACCCATAGCCTGGGCAGTTGCTACAAAACACGAGG
GCGATGCCAGTGAAGAAGCTTCTCTCACCGATGAGGCACCTACATCAGAAGTCATGCTAG
CCCGGAAGAGAAAAGCAGGAAGCTCTTTGTCGATAGAGCCAAACCATCTCTCTGATGAAC
TTGAACCAAAGCTGGAGGATGCTTAGAACGGGGAGACGTCTACCTGATAAGTAAAAGTTA
GCAGCATCGTGATGCCAACTGCCCCCTATCATGGTTTTATTGGCCCTCTGCTTGTTTCTC
ATTTCCCTTTGGAGCCAGTTTCTCTGTTTTGCGAGGTCACACAAGCCTTATTTGTAGTAT
TACAACACAGAAGCTGGCTGACCCAAAATCCGACACTCTGGGGGCAGCAACTTAACAAAA
TGTTTGTACGAGGGTTTAGAGCCCCACGGTGCTTCTTTGGATAAGTATGTTTATTACCTT
GTACTTAGCTAGGAACCTGCTTATATGTAAGATCTTTGTGTACGACGGAGAATTGTCACA
GCGGCATAATTCTGGT