Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006041_T040
CDS Infomation	cds chromosome:B73_RefGen_v4:2:196151933:196157855:1 gene:Zm00001d006041 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proton pump-interactor 1
Sequence	ATGTCCTCTGGCCATGATGATGCCCTAACGTCTCCCAAGTCTTGTTCTGCTGCCGTGGAG TCCGAGGTTATTAGAGAGGATAGCAAAGAACAGAGTATCACTGATGGTGTGGAGCCACAG CAGCAGGGTACAGTTGGGGCAAGTACTTTGGTGGAGAATGAGCATCTTTGTGCCGACATG ATGGCTGATTCATTTGTAGCTGCCAATGAGCCTGACAGTCAAGAGGATGCTGCTGTGATG TCCTCTGGCCATGATGATGCCCTAACGTCTCCCAAGTCTTGTTCTGCTGCCGTGGAGTCC GAGGTTATTAGAGAGGATAGCAAAGAACAGAGTATCACTGATGGTGTGGAGCCACAGCAG CAGGGTACAGTTGGGGCAAGTGCTTTGGTGGAGAATGAGCATCTTTGTGTCGACATGGCG GCTGATTCATTTGTAGCTGCTACTGAGCCTGACAGTCAAGAGGATGCTGCTGTGGAGTCC TGCGGGCACGATGATCTGCTAACTTTTACTGAGTCTGGTTCTGCTGACATTGAGTCTGAG GTTTATGGAGAGGATAGCGAACAAAAAGAGAGCAACACTGTTGTTGTGGAGATCGTGGTG CAGGGCGTAGGTAGGGCAGATGTGCTGATGGCAAATGGGCATCTTTGTGCCGACACCCAA GCTGGTTCTTCTGAAGCTACTACTGAGCCTGAGAATCATGCTAATGGCAGCAAACTGACT GATGTTGCAGAATCAGTGGAGGGGGATGCCGGCAGTGGAGAACAGGATACAATGGATTCG TCGCAAACCAATGGGCATATTTATGTTGCCTTGAGTGCTGATTCTTGTATAGTTCCTTCT GAGTCCAAGGCCCATTCCTTTGAGACAGATGGGCAACGAACTGATCAGCTACAAGAGGAA GCTCCAAAACTTGAAGCTGAAGTATTGGAGGGAGTGCTAAAACCAACTGAAAGGAACTGT GCAGGTAGTGTTGAGAAACTCATAGGAGAGGAAGTTGGCACAGATGGGCATGCAAGCATA GGAGGTACAGCTGATGCTTATGGGGAGCAAGAAGCCAAGCCTATGCAGGTAGAAGGTGAA GTCACTTGCGGTATTCTCGAATTTGAAAAAGTGGATAAGGATGGTGAAGAGGGTTTGTGT GATGACTACACGGTTGGTGTTGTTTCTTCTAATGAGGAAACAGAGCTTCCTATGAAGGAA AAAGTAGATGAAGCTGTCCCCAGTGTTAATGTTGGTGGGCCAGAGAAAGTAACTGACAAT ACAAGCCAAGATACCAAGACAGTTGATTTTATTGATGAAATCACAGCAGAGTCAAACTTT AAAGCTGAAAATATGGTTGAAGTGAAAAGTGCAGCTCGTGAAGTTGACAAAACAGAGGTA AAAGATCTTGCTTTTGCTGATGAGGCTAATGTAGCTCCTTTACACCTTCAACGTGACTGT GAATCTGTTATGGAAACTATAGAGCATGAGAAGGTAGAATTACCAGGTGGTTGTCAAGCT CATGAAATTGTGTATTCTTCAGAACTAGAACCGAAGAAAGAGTTTGAGATGGGGGTTGAT GGTGCTGTTCCATTGCAAGGAGCTGCAGCTTCTGTTGCCTCTGTTTTCCACCATGAGCCA ATGTCCATTGATTTGTCTGAGAATGATAGCGGTAACCATTCTGGCCCAACTACTGCGTTG GAATCCTGTGACCATGTGCAAAATGAAGAGAGCATATCCCAAGAAATTTCCATGACCACT ATTGAGCAACCTATAGCTATTGATCAAGTTGAACCTGTCAACCTGAATGTAGATGAACTT GTGGTTGATGATGATCAACCTGGTTTTGCTCCAAGGTGTGAATCTGCTAGGCTGGATAAA CCTGGATGTACTTCCAAAAAGGATGATTCAAATGAGATTGTTGAAGATAGCAAATCACTG GAAAATCAGTTAGAAATTTGCAATGCAGCTACTATGTCTGATGAGTGTTCCTCCAGAAAT GCAAATGAAGATCCCTCTCCAATTAATATGTCTGCTGAGTGTTCCTCCAGAACTGCAAAT GAAGGTTTCTCTCCAATTAATGAGGCTTCTCATCTAGCTGAGGAGTCTTGCCTTTCAGAC AAGTCATACAATGCTATCAGTTATGAAAATGGAAATGGGCCTGCTAAATCTTCTGAGGAG CCTGACAAGTCATGCAATGCTATCATTTGTGAAAATGAAAATGAGCCTGCTAAATCTTCT GATGTGGTTGAAACCAGATGCGTGGAAGCATTAGCGCCTTCATCTGTTGGCACGGTTGTC ACGGCAGAACAGAAGGACAATGGACACCGTGCTTCTGGTGAGTGGCATGGAGATAATGTG CAAGTCATTGGACAACAACAGAAGATCTACATAATTAAAGTTCCAAAGTTTGCCGGTGAT GATCTCTGGAATAAGATCCAGGCTGCACAGGCTCACTTAGACCACCTGACCCAGGAAAGA GATGCAATTAACCGTCGTAGGCAAAAGCAAAAGGCTGTATGTGATCAATACAGGGAGAAG CTTGAGGCAGCACGTAGAGAAGAGCGGGAAGCTAGGACTGCACATGGAGATAAGAAGAAT GATTTAAATAATGTACGTTCGGTACTAGGGAAATTGCACCAAGCAAATTCAGCTGAAGAA CTTGATGAGCTGATTGCGAAGAAAGAGAGGACTATGCAACATGAGACCATTTCTTTGAAA GAAGAAAAACTTTTAATTAAAGAGATTAATGAATTAAAAGCCCAACGGAAGCAGCTATCC ACCACTATGGGCTCAAAGGCTGAAATCAATGAGGCATTTGACCAAAAAGATCACATTCAT GAAAGGCATAAGGTGTTAAAGAAGGATTCTGATGTTTTATTGACCAACCTGAAATTCCTA GAGGAAAACACAAGAAAGATTCAAAAGTCTTTCGAAGATGAAAGAACAGGTCTCAGAAAA TTAACAGAGGAACACCGAGCAGCTAATGAAATACGTCAAAAGGCCTACATTGAATGGACT GAGCTTAGATCAGAGCCCTCCAAGAAGAATGAATACTTCTTCAGGTACAGGGATGACCGG AATGCAGCAGAAATTTTCAGAGCTAATGGCGATATAAATGGACTTAAATCACACTGTAAT AGTCAGGTAAATCGCACAGCCTGTCTTCAATATGTCTGCAGTTAA

Peptide Sequence

PEP ID	Zm00001d006041_P040
PEP Infomation	pep chromosome:B73_RefGen_v4:2:196151933:196157855:1 gene:Zm00001d006041 transcript:Zm00001d006041_T040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proton pump-interactor 1
Sequence	MSSGHDDALTSPKSCSAAVESEVIREDSKEQSITDGVEPQQQGTVGASTLVENEHLCADM MADSFVAANEPDSQEDAAVMSSGHDDALTSPKSCSAAVESEVIREDSKEQSITDGVEPQQ QGTVGASALVENEHLCVDMAADSFVAATEPDSQEDAAVESCGHDDLLTFTESGSADIESE VYGEDSEQKESNTVVVEIVVQGVGRADVLMANGHLCADTQAGSSEATTEPENHANGSKLT DVAESVEGDAGSGEQDTMDSSQTNGHIYVALSADSCIVPSESKAHSFETDGQRTDQLQEE APKLEAEVLEGVLKPTERNCAGSVEKLIGEEVGTDGHASIGGTADAYGEQEAKPMQVEGE VTCGILEFEKVDKDGEEGLCDDYTVGVVSSNEETELPMKEKVDEAVPSVNVGGPEKVTDN TSQDTKTVDFIDEITAESNFKAENMVEVKSAAREVDKTEVKDLAFADEANVAPLHLQRDC ESVMETIEHEKVELPGGCQAHEIVYSSELEPKKEFEMGVDGAVPLQGAAASVASVFHHEP MSIDLSENDSGNHSGPTTALESCDHVQNEESISQEISMTTIEQPIAIDQVEPVNLNVDEL VVDDDQPGFAPRCESARLDKPGCTSKKDDSNEIVEDSKSLENQLEICNAATMSDECSSRN ANEDPSPINMSAECSSRTANEGFSPINEASHLAEESCLSDKSYNAISYENGNGPAKSSEE PDKSCNAIICENENEPAKSSDVVETRCVEALAPSSVGTVVTAEQKDNGHRASGEWHGDNV QVIGQQQKIYIIKVPKFAGDDLWNKIQAAQAHLDHLTQERDAINRRRQKQKAVCDQYREK LEAARREEREARTAHGDKKNDLNNVRSVLGKLHQANSAEELDELIAKKERTMQHETISLK EEKLLIKEINELKAQRKQLSTTMGSKAEINEAFDQKDHIHERHKVLKKDSDVLLTNLKFL EENTRKIQKSFEDERTGLRKLTEEHRAANEIRQKAYIEWTELRSEPSKKNEYFFRYRDDR NAAEIFRANGDINGLKSHCNSQVNRTACLQYVCS

Transcript Sequence

Transcript ID	Zm00001d006041_T040
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:196151933:196157855:1 gene:Zm00001d006041 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proton pump-interactor 1
Sequence	AATGCGAACCTACCATCACCAGTGCTGACTCTGAGGCACACTATGTGGATTCTGAGGTTG AAGACAAGGAGGGCACAGTGGATGGTAGTGCTGTTGTTGATGCCGTTGAAGCGGTGGTGC ATCAGGAAGCTAGTACAGAGCAGGATGAAGATGCTGCTGTGATGTCCTCTGGCCATGATG ATGCCCTAACGTCTCCCAAGTCTTGTTCTGCTGCCGTGGAGTCCGAGGTTATTAGAGAGG ATAGCAAAGAACAGAGTATCACTGATGGTGTGGAGCCACAGCAGCAGGGTACAGTTGGGG CAAGTACTTTGGTGGAGAATGAGCATCTTTGTGCCGACATGATGGCTGATTCATTTGTAG CTGCCAATGAGCCTGACAGTCAAGAGGATGCTGCTGTGATGTCCTCTGGCCATGATGATG CCCTAACGTCTCCCAAGTCTTGTTCTGCTGCCGTGGAGTCCGAGGTTATTAGAGAGGATA GCAAAGAACAGAGTATCACTGATGGTGTGGAGCCACAGCAGCAGGGTACAGTTGGGGCAA GTGCTTTGGTGGAGAATGAGCATCTTTGTGTCGACATGGCGGCTGATTCATTTGTAGCTG CTACTGAGCCTGACAGTCAAGAGGATGCTGCTGTGGAGTCCTGCGGGCACGATGATCTGC TAACTTTTACTGAGTCTGGTTCTGCTGACATTGAGTCTGAGGTTTATGGAGAGGATAGCG AACAAAAAGAGAGCAACACTGTTGTTGTGGAGATCGTGGTGCAGGGCGTAGGTAGGGCAG ATGTGCTGATGGCAAATGGGCATCTTTGTGCCGACACCCAAGCTGGTTCTTCTGAAGCTA CTACTGAGCCTGAGAATCATGCTAATGGCAGCAAACTGACTGATGTTGCAGAATCAGTGG AGGGGGATGCCGGCAGTGGAGAACAGGATACAATGGATTCGTCGCAAACCAATGGGCATA TTTATGTTGCCTTGAGTGCTGATTCTTGTATAGTTCCTTCTGAGTCCAAGGCCCATTCCT TTGAGACAGATGGGCAACGAACTGATCAGCTACAAGAGGAAGCTCCAAAACTTGAAGCTG AAGTATTGGAGGGAGTGCTAAAACCAACTGAAAGGAACTGTGCAGGTAGTGTTGAGAAAC TCATAGGAGAGGAAGTTGGCACAGATGGGCATGCAAGCATAGGAGGTACAGCTGATGCTT ATGGGGAGCAAGAAGCCAAGCCTATGCAGGTAGAAGGTGAAGTCACTTGCGGTATTCTCG AATTTGAAAAAGTGGATAAGGATGGTGAAGAGGGTTTGTGTGATGACTACACGGTTGGTG TTGTTTCTTCTAATGAGGAAACAGAGCTTCCTATGAAGGAAAAAGTAGATGAAGCTGTCC CCAGTGTTAATGTTGGTGGGCCAGAGAAAGTAACTGACAATACAAGCCAAGATACCAAGA CAGTTGATTTTATTGATGAAATCACAGCAGAGTCAAACTTTAAAGCTGAAAATATGGTTG AAGTGAAAAGTGCAGCTCGTGAAGTTGACAAAACAGAGGTAAAAGATCTTGCTTTTGCTG ATGAGGCTAATGTAGCTCCTTTACACCTTCAACGTGACTGTGAATCTGTTATGGAAACTA TAGAGCATGAGAAGGTAGAATTACCAGGTGGTTGTCAAGCTCATGAAATTGTGTATTCTT CAGAACTAGAACCGAAGAAAGAGTTTGAGATGGGGGTTGATGGTGCTGTTCCATTGCAAG GAGCTGCAGCTTCTGTTGCCTCTGTTTTCCACCATGAGCCAATGTCCATTGATTTGTCTG AGAATGATAGCGGTAACCATTCTGGCCCAACTACTGCGTTGGAATCCTGTGACCATGTGC AAAATGAAGAGAGCATATCCCAAGAAATTTCCATGACCACTATTGAGCAACCTATAGCTA TTGATCAAGTTGAACCTGTCAACCTGAATGTAGATGAACTTGTGGTTGATGATGATCAAC CTGGTTTTGCTCCAAGGTGTGAATCTGCTAGGCTGGATAAACCTGGATGTACTTCCAAAA AGGATGATTCAAATGAGATTGTTGAAGATAGCAAATCACTGGAAAATCAGTTAGAAATTT GCAATGCAGCTACTATGTCTGATGAGTGTTCCTCCAGAAATGCAAATGAAGATCCCTCTC CAATTAATATGTCTGCTGAGTGTTCCTCCAGAACTGCAAATGAAGGTTTCTCTCCAATTA ATGAGGCTTCTCATCTAGCTGAGGAGTCTTGCCTTTCAGACAAGTCATACAATGCTATCA GTTATGAAAATGGAAATGGGCCTGCTAAATCTTCTGAGGAGCCTGACAAGTCATGCAATG CTATCATTTGTGAAAATGAAAATGAGCCTGCTAAATCTTCTGATGTGGTTGAAACCAGAT GCGTGGAAGCATTAGCGCCTTCATCTGTTGGCACGGTTGTCACGGCAGAACAGAAGGACA ATGGACACCGTGCTTCTGGTGAGTGGCATGGAGATAATGTGCAAGTCATTGGACAACAAC AGAAGATCTACATAATTAAAGTTCCAAAGTTTGCCGGTGATGATCTCTGGAATAAGATCC AGGCTGCACAGGCTCACTTAGACCACCTGACCCAGGAAAGAGATGCAATTAACCGTCGTA GGCAAAAGCAAAAGGCTGTATGTGATCAATACAGGGAGAAGCTTGAGGCAGCACGTAGAG AAGAGCGGGAAGCTAGGACTGCACATGGAGATAAGAAGAATGATTTAAATAATGTACGTT CGGTACTAGGGAAATTGCACCAAGCAAATTCAGCTGAAGAACTTGATGAGCTGATTGCGA AGAAAGAGAGGACTATGCAACATGAGACCATTTCTTTGAAAGAAGAAAAACTTTTAATTA AAGAGATTAATGAATTAAAAGCCCAACGGAAGCAGCTATCCACCACTATGGGCTCAAAGG CTGAAATCAATGAGGCATTTGACCAAAAAGATCACATTCATGAAAGGCATAAGGTGTTAA AGAAGGATTCTGATGTTTTATTGACCAACCTGAAATTCCTAGAGGAAAACACAAGAAAGA TTCAAAAGTCTTTCGAAGATGAAAGAACAGGTCTCAGAAAATTAACAGAGGAACACCGAG CAGCTAATGAAATACGTCAAAAGGCCTACATTGAATGGACTGAGCTTAGATCAGAGCCCT CCAAGAAGAATGAATACTTCTTCAGGTACAGGGATGACCGGAATGCAGCAGAAATTTTCA GAGCTAATGGCGATATAAATGGACTTAAATCACACTGTAATAGTCAGGTAAATCGCACAG CCTGTCTTCAATATGTCTGCAGTTAATATATCATTTTTTAGTCTGGTTTGGCTTCTGTTG ATTGAGCTGGTGTGACATTCCATATGCTTTTTTCTTATTAAGGAACGATGCAAGTTTGTA CCATTCATGTTTGCTAGTCCTTCTACGCATTATATATTTATATGTATCCCAGTACTACAG CTAAGCATTGTATTCGTAGTCCCACCCTTGACCCTTCTAATAACTGTCAGCATTGTGGAG ACTCCTACTTTTTTTTTCATTTGATTGTTATTAAACTCCAACCCTCCCTAGTACAATGCT GTTTTGTCTCAACATTTTGTGATGCGCCAATATTTGTTTTATCCTCTCTTAGATTGAGGG AGTCATGGAAATGTGGAACAAAAACGAGGAATTCCGCAAGCAGTATGTTGAGTCAAACAA GGTTAGCACACTAAAGAGATTAGGGACCCATGATGGACGGAAACTTGGCCCTGATGAGGA CCCTCCAGTCATATCAAGCAGAAGACCAAGCAGCATCTATCCATTGTCTGCCTCAAGCCC GGGAGTGGCCACTTTAGCTTCAATACCAGCACCTGTGGTAGCTGCTCCAGCTGCAGTCTC TGCCAAAGAGGACTCATTTCCTGTTTTGGAAGCCCCCCAGACCAGCAAGCGCACCAAGTC AAAAGCATCTGATATCTGTGCCCAGACCGAGAACAACTCTGTTATAGTATCGGAGGCAGA GGCTTTGGAACAGACTTTGAAAGAGAAAGCTCGTCTATTGGAGGAACAATTGGAGTTAGC TAGGAAGGCAGAGGAGTTGGCACGGAAGGAGGAGGAATTAAGCAAAGAGAGGGCTGCCGC TGAGAAGGAGCGGCTTAGGATGGAGCAGAAGGCTAAGGCCAAGGAGGCCGAGGAGAGGAA GAGGCGGAAAGCCGAGAAGGACAAGGAGAAAGCCGAGTTCAAAGCGCGCAAGGAAGCTGA GGAGAGGGAGAAGAAGAAAGCCAAGAAAGACAAAAGGAGAGGCACGGCACCAGCAGATTC TAGCCTCACTGGTGACGGGCACGCCGCGGCCTTGGCCACAGCAGACACTGACAGCAACGC ATCGGACAACCCGAGGGAAGCTGAGGCTCCTCAACCGGCGGCGGCTCCCAAGAGGCTGTC TAGGCCCGCAGCGGCAATCAAGCAGCTGAACAGGGTGCAGCCCATGCCGGCGCCGCTACG TAACAGGGGCAGAAGGAGACTGCGGCAGTACATCCTGATCGCGGCGGCCGTGCTATCGGG GCTTGCGTTGTTCGTGGCAGGCAACTATATTCCCAGGCTCAAGTCGGTTCACTCCTAAGT TTATCTGTAGGAAAGGGGTGCTAATCTGTCGCGGTGAACCTGGGTGTGATTCGTATTATT TCGATTATTCTCCGGTTGGTTTGTACTATTTTTTTTTTACCTCATATAGGTTGGTTGTGA AAGATGGGGGTGCATTGTGT