Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d006040_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:196142203:196146694:1 gene:Zm00001d006040 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	ATGGATATGGATGTCCGCCGCAGGGTTCCACCGCCGCACGGGAGCGTCCCTAGGCGCCAG CAGGCGACCGGGGCCGAGGGGGAGCGGGTGCGTGTGCAGGCGGGTGATGCGCTACCGCTG CCGATCCGGCACACGAACCTCATCTTCTCGGCGCTGTTCGCCGCGTCGCTGGTGTACCTG ATGCGTCGGTGGCGGGGGAAGATCCGCGCCTCCACGCCGCTCCACGTGGTCTCCCCCGCC GAGATCTTCGCCATCTGCGGCCTCGTCGCGTCGCTCATCTACCTCCTCAGCTTCTTCGGG ATCGCCTTCGTGCAGTCCGTCGTCTCCAGCAGCGACGACGACGAGGACTTCATCGTCGAC TCCCGCCACGCGCGGGCGCGGGCGCCGCCGACGCCTGCGCAGACCCCGTGTGCGCTGCTG GGGAGCCCCGCCGCCGCGACGGAGAAAATGCCGGAGGAGGACGAGGAGATCGTGGCCGCG GTTGTGGCAGGGAAGATCCCGTCCTACGTGCTGGAGTCTAGGCTGGGAGATTGCCGCCGG GCCGCCGGGATCAGGAGGGAGGCGCTGCGCCGGATCACCGGAAGGGATATGGACGGGCTC CCGCTCGACGGGTTCGACTACGCGTCCATCCTGGGCCAATGCTGCGAGCTGCCGGTCGGG TACGTGCAGCTTCCCGTGGGCGTCGCCGGACCGCTCCTGCTCGACGGGCGCCGCCTCTAC GTACCGATGGCCACCACCGAGGGCTGCCTCGTCGCCAGCACGAACCGCGGATGCAAGGCC ATTGCCGAGTCCGGTGGTGCCTCCAGCGTCGTTTTCAGGGACGGGATGACGCGAGCCCCG GTCGTCCGGTTCCCGTCTGCACGCCGCGCCGCTGAGCTCAAGGCCTTCTTGGAGGACCCA GCGAACTTTGACACCCTGGCCGTGGTGTTTAACAGATCGAGCAGATTTGGAAGGCTGCAG GGAGTGAAGTGTGCGATTGCAGGAAGGAACTTGTACATGAGGTTCAGCTGCAGCACAGGG GATGCCATGGGGATGAACATGGTCTCCAAGGGTGTGCAGAACGTGCTGGACTACCTCCAG GCCGACTTCCCTGACATGGATGTCATCAGCATATCAGGTAACTTCTGTTCTGACAAGAAG TCAGCTGCTGTGAACTGGATTGATGGCCGTGGGAAGTCGGTGGTTTGTGAGGCAGTAATC AAGGAAGAAGTTGTGAAAAAGGTTCTCAAAACAAATGTTCAGGCTCTTGTAGAATTGAAC GTGATCAAGAACCTCGCTGGTTCAGCTGTTGCTGGCGCTCTTGGGGGTTTCAATGCCCAT GCAAGTAACATTGTGGCGGCCATCTTCATTGCCACTGGTCAGGACCCTGCACAGAACGTG GAGAGTTCCCAGTGTATCACCATGTTGGAAGCTATAAATGATGGCAAAGATCTGCACGTC TCCGTTACTATGCCATCTATTGAGGTTGGCACAGTTGGTGGAGGCACGCAGCTGGCCTCA CAATCTGCCTGCTTGGACCTGCTTGGCGTCAAAGGTGCTAACAGGGAATCCCCAGGGTCC AACGCGCGGCTCTTGGCCACGGTGGTTGCCGGTGCGGTCCTAGCCGCGGAGCTGTCCCTC ATCTCTGCGCAGGCCGCTGGCCATCTGGTCCAGAGCCACATGAAATACAACAGGTCCAGC AAGGCCCTTGCAGAGGAAACAGACAAACCCAAGAAATGTTGA

Peptide Sequence

PEP ID	Zm00001d006040_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:196142203:196146694:1 gene:Zm00001d006040 transcript:Zm00001d006040_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	MDMDVRRRVPPPHGSVPRRQQATGAEGERVRVQAGDALPLPIRHTNLIFSALFAASLVYL MRRWRGKIRASTPLHVVSPAEIFAICGLVASLIYLLSFFGIAFVQSVVSSSDDDEDFIVD SRHARARAPPTPAQTPCALLGSPAAATEKMPEEDEEIVAAVVAGKIPSYVLESRLGDCRR AAGIRREALRRITGRDMDGLPLDGFDYASILGQCCELPVGYVQLPVGVAGPLLLDGRRLY VPMATTEGCLVASTNRGCKAIAESGGASSVVFRDGMTRAPVVRFPSARRAAELKAFLEDP ANFDTLAVVFNRSSRFGRLQGVKCAIAGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQ ADFPDMDVISISGNFCSDKKSAAVNWIDGRGKSVVCEAVIKEEVVKKVLKTNVQALVELN VIKNLAGSAVAGALGGFNAHASNIVAAIFIATGQDPAQNVESSQCITMLEAINDGKDLHV SVTMPSIEVGTVGGGTQLASQSACLDLLGVKGANRESPGSNARLLATVVAGAVLAAELSL ISAQAAGHLVQSHMKYNRSSKALAEETDKPKKC

Transcript Sequence

Transcript ID	Zm00001d006040_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:196142203:196146694:1 gene:Zm00001d006040 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
Sequence	GCCCGGCCCCAAATCAAATCCCCAAACCCCCGTCCTCCTCGCCGCTCCGCCGCGCGGTTG AGCGCCGACGAGCGAGCCCACCGCTGCCTCGTCCGCCCTATGGATATGGATGTCCGCCGC AGGGTTCCACCGCCGCACGGGAGCGTCCCTAGGCGCCAGCAGGCGACCGGGGCCGAGGGG GAGCGGGTGCGTGTGCAGGCGGGTGATGCGCTACCGCTGCCGATCCGGCACACGAACCTC ATCTTCTCGGCGCTGTTCGCCGCGTCGCTGGTGTACCTGATGCGTCGGTGGCGGGGGAAG ATCCGCGCCTCCACGCCGCTCCACGTGGTCTCCCCCGCCGAGATCTTCGCCATCTGCGGC CTCGTCGCGTCGCTCATCTACCTCCTCAGCTTCTTCGGGATCGCCTTCGTGCAGTCCGTC GTCTCCAGCAGCGACGACGACGAGGACTTCATCGTCGACTCCCGCCACGCGCGGGCGCGG GCGCCGCCGACGCCTGCGCAGACCCCGTGTGCGCTGCTGGGGAGCCCCGCCGCCGCGACG GAGAAAATGCCGGAGGAGGACGAGGAGATCGTGGCCGCGGTTGTGGCAGGGAAGATCCCG TCCTACGTGCTGGAGTCTAGGCTGGGAGATTGCCGCCGGGCCGCCGGGATCAGGAGGGAG GCGCTGCGCCGGATCACCGGAAGGGATATGGACGGGCTCCCGCTCGACGGGTTCGACTAC GCGTCCATCCTGGGCCAATGCTGCGAGCTGCCGGTCGGGTACGTGCAGCTTCCCGTGGGC GTCGCCGGACCGCTCCTGCTCGACGGGCGCCGCCTCTACGTACCGATGGCCACCACCGAG GGCTGCCTCGTCGCCAGCACGAACCGCGGATGCAAGGCCATTGCCGAGTCCGGTGGTGCC TCCAGCGTCGTTTTCAGGGACGGGATGACGCGAGCCCCGGTCGTCCGGTTCCCGTCTGCA CGCCGCGCCGCTGAGCTCAAGGCCTTCTTGGAGGACCCAGCGAACTTTGACACCCTGGCC GTGGTGTTTAACAGATCGAGCAGATTTGGAAGGCTGCAGGGAGTGAAGTGTGCGATTGCA GGAAGGAACTTGTACATGAGGTTCAGCTGCAGCACAGGGGATGCCATGGGGATGAACATG GTCTCCAAGGGTGTGCAGAACGTGCTGGACTACCTCCAGGCCGACTTCCCTGACATGGAT GTCATCAGCATATCAGGTAACTTCTGTTCTGACAAGAAGTCAGCTGCTGTGAACTGGATT GATGGCCGTGGGAAGTCGGTGGTTTGTGAGGCAGTAATCAAGGAAGAAGTTGTGAAAAAG GTTCTCAAAACAAATGTTCAGGCTCTTGTAGAATTGAACGTGATCAAGAACCTCGCTGGT TCAGCTGTTGCTGGCGCTCTTGGGGGTTTCAATGCCCATGCAAGTAACATTGTGGCGGCC ATCTTCATTGCCACTGGTCAGGACCCTGCACAGAACGTGGAGAGTTCCCAGTGTATCACC ATGTTGGAAGCTATAAATGATGGCAAAGATCTGCACGTCTCCGTTACTATGCCATCTATT GAGGTTGGCACAGTTGGTGGAGGCACGCAGCTGGCCTCACAATCTGCCTGCTTGGACCTG CTTGGCGTCAAAGGTGCTAACAGGGAATCCCCAGGGTCCAACGCGCGGCTCTTGGCCACG GTGGTTGCCGGTGCGGTCCTAGCCGCGGAGCTGTCCCTCATCTCTGCGCAGGCCGCTGGC CATCTGGTCCAGAGCCACATGAAATACAACAGGTCCAGCAAGGCCCTTGCAGAGGAAACA GACAAACCCAAGAAATGTTGAATAATATCAAGTTGTTGTTTTATAACCCTTTGGGAGAAC GGAGCGAAAAGGGTCCCACAGGATGATTCCTTGCGGCATGCTCGGGTGGAAAGGGAAAAA AACCCTTCTGGCGAAAAGAGAGAATTCAGTCGACTCGTCATATTTACCAAGCGGTGAGAC CTGTTGTGGATCCTGGAGTATGACCTATTTAATTCGTTGATGTTGTCGTTATAGTTCCTC TACACTACACTCGTTGACCCCGCCTGCATCTAGTTTTGCCCGTCCATGGGCGGAGAATCT GACCATGGGTTTGTCCCAAGCTTGCATCACAGTGGCGCATCCAGTGACCCACGTGATCTC TGCTTTGCCGCAGAAAATTTTTGCGGAGCAACTGCCGGGTGCTTTGTATTTCAGCTTTGT AAATTTACTTTTATCCAGTCGTTCTGAGTCCAAGCCGTCAGTGCAGTCGGTGGTGTAGTT GATTAAAGTACGAAATGTAAATGGAATAATAAAAATAAAGAGCTGTGTTTTGCATTTATC TAAGAAATATATGTAGAGCTGTGTTTTGCATTTATCTAAGAAATATATGTGGTAAAATGG TACG