Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005976_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:2:194516622:194519448:1 gene:Zm00001d005976 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	ATGGCTGGGCAAACGGCAAAGGCAAAGGAAGCAGAAAAAGATGACAGACAAGAACCCGGA GCTGAGGGGGCGAAAAACAAGCTACTGCCGTCTCACCAGCAGCAAGACTCTCCAGCTTCT GTGGCGGACAATGATTCTTCAGGTGTCTCTTCAGTTCCTGGCGATGAGTCGCCTGTCCTG GATGGGGATTCTGGTGAGTTGAAAGTGGAGGAAAACTTGGATGGTAATGGGAGTAAGGAA AAGAAAACGTCTCAGAAGAGCAGTACTAGTGACGGCTTTGCTTCTGCTAAAGTGAGTGAT GGGACAAGTAGTTTGAGGAAGACCAGTGGTAGTGCGACGATGAGTACACGGGCCGATTTC ACTGAGAGTGGGAAGAGTAGCATGTGCCGTGTGAGCACGGCCAGTGACATTAGCGACGAG AGCTCGTGCAGCAGCATGAGCAGTGCCACCACAAAGCCACACAAGGGGAATGATTCAAGG TGGGAGGCGATCCATGTTGTGAAGTCCAGGGATAATGTTCTTGGACTGAATCATTTTAGG CTGCTTAAGAAGTTGGGTTCTGGTGATATAGGAAGTGTGTATCTCTCTGAACTGAGTGGT ACACGGAGTTACTTTGCAATGAAGGTAATGGATAAGACTTCTTTGGCGAGTCGGAAGAAG CTGCTTCGAGCTCAGACCGAGCGGGAGATCCTACAGTCCCTGGACCATCCATTTCTACCA ACCCTGTACACTCATTTTGAGACAGACAAGTTTTCATGCTTAGTTATGGAATTCTGCCCT GGAGGTGACCTTCATACTCTTCGTCAAAGGCAACCTGGAAAATATTTCTCAGAGCAAGCA GCAAAGTTCTATGTGGCAGAGGTACTCCTTGCATTGGAATACCTGCATATGCTTGGGATT ATATACCGTGATCTTAAACCAGAAAATGTCCTCGTTCGGGAAGATGGCCACATCATGCTA TCAGACTTTGATCTCTCTCTTCGCTGTTCAGTAAGCCCAACGGTGATCAAGTCTGCAAAT CCTGGCCTAGATGCAATGCAGAGGAACAATGCAGCATACTGTGCCCAGCCTGCTTGCATT GAACCATCCTGCATTCAGCCCTCTTGTGTAGCTCCAACTACTTGCTTTGGCCCCCGGTTC TTCTCCAAATCTAAATCAAAGTCCAAGTCCAAGTCCAAGAAGGACAAGTCAAAGCCTGAT GCTCCAAACCAAGAGAACCTCTTCCCAGAGCTCATTGCTGAGCCAACTGACGCTCGCTCG ATGTCCTTTGTTGGCACTCATGAGTACCTGGCCCCAGAAATAATAAAAGGGGAGGGCCAT GGAAGTGCTGTGGATTGGTGGACCTTTGGCATATTCTTGTACGAGCTGTTGTTCGGGAAG ACCCCATTCAAAGGTTCAGGCAACCGGGCTACACTCTTCAACGTTGTTGGCCAGCCCTTG AGGTTCCCAGAGTCCCCAATAGTGAGCTTCTCTGCGAGGGACATGATAAGGGGATTGCTA GTCAAGGACCCGCAGCACCGACTTGGGTATAAGCGTGGCGCTACCGAGATAAAGCAGCAT CCTTTCTTCGAGGGCGTGAACTGGGCTCTGATAAGGTGTGCGAGCCCTCCAGACATACCA AAGCCTGTTGAGCTCGAGTGTCGCCCAAAGCAAGTGCCATCAGCAAATGGAAAGGTCGCG CCAGCCCCTAACCAAAAGGGGCCAGATAATTATCTAGAGTTTGAATTCTTCTAG

Peptide Sequence

PEP ID	Zm00001d005976_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:2:194516622:194519448:1 gene:Zm00001d005976 transcript:Zm00001d005976_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	MAGQTAKAKEAEKDDRQEPGAEGAKNKLLPSHQQQDSPASVADNDSSGVSSVPGDESPVL DGDSGELKVEENLDGNGSKEKKTSQKSSTSDGFASAKVSDGTSSLRKTSGSATMSTRADF TESGKSSMCRVSTASDISDESSCSSMSSATTKPHKGNDSRWEAIHVVKSRDNVLGLNHFR LLKKLGSGDIGSVYLSELSGTRSYFAMKVMDKTSLASRKKLLRAQTEREILQSLDHPFLP TLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFSEQAAKFYVAEVLLALEYLHMLGI IYRDLKPENVLVREDGHIMLSDFDLSLRCSVSPTVIKSANPGLDAMQRNNAAYCAQPACI EPSCIQPSCVAPTTCFGPRFFSKSKSKSKSKSKKDKSKPDAPNQENLFPELIAEPTDARS MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPL RFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALIRCASPPDIP KPVELECRPKQVPSANGKVAPAPNQKGPDNYLEFEFF

Transcript Sequence

Transcript ID	Zm00001d005976_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:194516622:194519448:1 gene:Zm00001d005976 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine-protein kinase D6PKL1
Sequence	CTTTTTTCTTTCTTTCTTTTTATCTCATAGACTAGGACTTGGGGATTGTGCTGCTACTCA GCTGAAAGTTTATAGAAGGTGGAGAAGTTGTGGTGTTTCCCTACCTGTTAGTCTGCACTT CTTTGTTCCTGATCAACTGCTCCGACACGATTGTTGTCTTCTCAACCTCTCTTGCCAAGC ATGGCTGGGCAAACGGCAAAGGCAAAGGAAGCAGAAAAAGATGACAGACAAGAACCCGGA GCTGAGGGGGCGAAAAACAAGCTACTGCCGTCTCACCAGCAGCAAGACTCTCCAGCTTCT GTGGCGGACAATGATTCTTCAGGTGTCTCTTCAGTTCCTGGCGATGAGTCGCCTGTCCTG GATGGGGATTCTGGTGAGTTGAAAGTGGAGGAAAACTTGGATGGTAATGGGAGTAAGGAA AAGAAAACGTCTCAGAAGAGCAGTACTAGTGACGGCTTTGCTTCTGCTAAAGTGAGTGAT GGGACAAGTAGTTTGAGGAAGACCAGTGGTAGTGCGACGATGAGTACACGGGCCGATTTC ACTGAGAGTGGGAAGAGTAGCATGTGCCGTGTGAGCACGGCCAGTGACATTAGCGACGAG AGCTCGTGCAGCAGCATGAGCAGTGCCACCACAAAGCCACACAAGGGGAATGATTCAAGG TGGGAGGCGATCCATGTTGTGAAGTCCAGGGATAATGTTCTTGGACTGAATCATTTTAGG CTGCTTAAGAAGTTGGGTTCTGGTGATATAGGAAGTGTGTATCTCTCTGAACTGAGTGGT ACACGGAGTTACTTTGCAATGAAGGTAATGGATAAGACTTCTTTGGCGAGTCGGAAGAAG CTGCTTCGAGCTCAGACCGAGCGGGAGATCCTACAGTCCCTGGACCATCCATTTCTACCA ACCCTGTACACTCATTTTGAGACAGACAAGTTTTCATGCTTAGTTATGGAATTCTGCCCT GGAGGTGACCTTCATACTCTTCGTCAAAGGCAACCTGGAAAATATTTCTCAGAGCAAGCA GCAAAGTTCTATGTGGCAGAGGTACTCCTTGCATTGGAATACCTGCATATGCTTGGGATT ATATACCGTGATCTTAAACCAGAAAATGTCCTCGTTCGGGAAGATGGCCACATCATGCTA TCAGACTTTGATCTCTCTCTTCGCTGTTCAGTAAGCCCAACGGTGATCAAGTCTGCAAAT CCTGGCCTAGATGCAATGCAGAGGAACAATGCAGCATACTGTGCCCAGCCTGCTTGCATT GAACCATCCTGCATTCAGCCCTCTTGTGTAGCTCCAACTACTTGCTTTGGCCCCCGGTTC TTCTCCAAATCTAAATCAAAGTCCAAGTCCAAGTCCAAGAAGGACAAGTCAAAGCCTGAT GCTCCAAACCAAGAGAACCTCTTCCCAGAGCTCATTGCTGAGCCAACTGACGCTCGCTCG ATGTCCTTTGTTGGCACTCATGAGTACCTGGCCCCAGAAATAATAAAAGGGGAGGGCCAT GGAAGTGCTGTGGATTGGTGGACCTTTGGCATATTCTTGTACGAGCTGTTGTTCGGGAAG ACCCCATTCAAAGGTTCAGGCAACCGGGCTACACTCTTCAACGTTGTTGGCCAGCCCTTG AGGTTCCCAGAGTCCCCAATAGTGAGCTTCTCTGCGAGGGACATGATAAGGGGATTGCTA GTCAAGGACCCGCAGCACCGACTTGGGTATAAGCGTGGCGCTACCGAGATAAAGCAGCAT CCTTTCTTCGAGGGCGTGAACTGGGCTCTGATAAGGTGTGCGAGCCCTCCAGACATACCA AAGCCTGTTGAGCTCGAGTGTCGCCCAAAGCAAGTGCCATCAGCAAATGGAAAGGTCGCG CCAGCCCCTAACCAAAAGGGGCCAGATAATTATCTAGAGTTTGAATTCTTCTAGGGAATT TTTTTTTGTGATTTCTGAACTGAAAGAGTGCATCTGGGCAGATGCTGTGAAAGAAAGTGA AAGATGATGAGCTACTCTAGGCATGTGCTTGGCTGGATCTTTTTTTTTTCTGCCATTAGA CTGTACGCTCGTTTCAGGATATCCGAGTTGTTTTTTCCTGCTGAACTGCTTAACTCTAGG GTGTACTCAATCCATCATGTATGTTGCAATTTTCAGAACTTGCCTATGGTACTTGAAATG GACTTCAGGGCTACTTGCTCCAGCTCTCTGTGTAATTGCTAATATACATTGTAATTGATG CTTCATCTTAGGAGT