Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d005940_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:2:193447338:193448411:-1 gene:Zm00001d005940 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL54
Sequence	ATGTACACGGTGCGCCCGCACGCGGCGGCGACGGTCACCCTTAACTGCACGGAAGCACCG CTCGACTGCCTCCCCCTCTGCCCCGGCGGCGGGGACGCCTGCTTCGAATACGTCCTGCCC CCACCACCCCCGATCCCGGTGATCCCGCGCGCGCCGGTCGCCGACCGCCACGCGCCCGTC CGCCTCATCCTCGTTATCTCCCTGCTCTCTATCTTCCTCTCCCTCTCGCTCGGGCTCTCC ACGCTCCTCCTCTACCGCCGCCGCCGCCGCCTCATCCTGCGACGACGCCGAAGCCTCGCC GCGGCCACCGCCGAAGGGCCCGACGACGAGGAGGAGGGCGGGGGCGGTGGAGGGGTGGTG CACCACGTGTGGTACATCCGGACGGTGGGGCTCGACGAGGCCACCATCGCGTCCATAGCC GCTGTGGAGTACCGCCGCGGGGTGGGCCGGAGCGGGGACTGCGCGGTGTGCCTCGGCGAG TTCAGCGACGGGGAGCTGGTGCGCCTCCTCCCGCGCTGCGCTCACCCGTTCCACGCGCCC TGCATCGACACCTGGCTCCGCGCCCACGTCAACTGCCCGATCTGCCGTTCCCCCGTCGTC GTCATTCCCTCCGATCTACCCGTCGATGCCGCGGAGGCTGAGGCAGGCGGTGCCCAATTG GGAGAACACTACGTTCACGAGGAAATGTCGCTGTCTCAATCTGAATCGGAGACTGAGGGC TCGGAGGACTCTGAGGCGTCGTCAGCCTCAGCCACTCAAAGTGAAGGCACGTCTACAGCG GAGGAGAATGGAAGGGACACGCCCAAGCCAATTAGGCGCTCGGCTTCCATGGATTCTCCG TTGTTTGCCGTAGCTCTTCCTGAAGCAAATGATGATGTGGTGCGGTATAATTGCAAGTTG CCAAATCCCCGAGAGATGAAGGTCTTCAGGGCGAAGGAGAAGGAGGCCGCAGGCATTTCT TCGTCCTCGTGTCAGTCAGGCCGGTTCAAGATTGGCAGGTCCATGTCAAGCAGTGGCCAA GGGTTTTTCTTCTCACGGAATGGCCGCTCCAGTGGTGCTGTGCTGCCACTGTGA

Peptide Sequence

PEP ID	Zm00001d005940_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:2:193447338:193448411:-1 gene:Zm00001d005940 transcript:Zm00001d005940_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL54
Sequence	MYTVRPHAAATVTLNCTEAPLDCLPLCPGGGDACFEYVLPPPPPIPVIPRAPVADRHAPV RLILVISLLSIFLSLSLGLSTLLLYRRRRRLILRRRRSLAAATAEGPDDEEEGGGGGGVV HHVWYIRTVGLDEATIASIAAVEYRRGVGRSGDCAVCLGEFSDGELVRLLPRCAHPFHAP CIDTWLRAHVNCPICRSPVVVIPSDLPVDAAEAEAGGAQLGEHYVHEEMSLSQSESETEG SEDSEASSASATQSEGTSTAEENGRDTPKPIRRSASMDSPLFAVALPEANDDVVRYNCKL PNPREMKVFRAKEKEAAGISSSSCQSGRFKIGRSMSSSGQGFFFSRNGRSSGAVLPL

Transcript Sequence

Transcript ID	Zm00001d005940_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:2:193447338:193448411:-1 gene:Zm00001d005940 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL54
Sequence	ATGTACACGGTGCGCCCGCACGCGGCGGCGACGGTCACCCTTAACTGCACGGAAGCACCG CTCGACTGCCTCCCCCTCTGCCCCGGCGGCGGGGACGCCTGCTTCGAATACGTCCTGCCC CCACCACCCCCGATCCCGGTGATCCCGCGCGCGCCGGTCGCCGACCGCCACGCGCCCGTC CGCCTCATCCTCGTTATCTCCCTGCTCTCTATCTTCCTCTCCCTCTCGCTCGGGCTCTCC ACGCTCCTCCTCTACCGCCGCCGCCGCCGCCTCATCCTGCGACGACGCCGAAGCCTCGCC GCGGCCACCGCCGAAGGGCCCGACGACGAGGAGGAGGGCGGGGGCGGTGGAGGGGTGGTG CACCACGTGTGGTACATCCGGACGGTGGGGCTCGACGAGGCCACCATCGCGTCCATAGCC GCTGTGGAGTACCGCCGCGGGGTGGGCCGGAGCGGGGACTGCGCGGTGTGCCTCGGCGAG TTCAGCGACGGGGAGCTGGTGCGCCTCCTCCCGCGCTGCGCTCACCCGTTCCACGCGCCC TGCATCGACACCTGGCTCCGCGCCCACGTCAACTGCCCGATCTGCCGTTCCCCCGTCGTC GTCATTCCCTCCGATCTACCCGTCGATGCCGCGGAGGCTGAGGCAGGCGGTGCCCAATTG GGAGAACACTACGTTCACGAGGAAATGTCGCTGTCTCAATCTGAATCGGAGACTGAGGGC TCGGAGGACTCTGAGGCGTCGTCAGCCTCAGCCACTCAAAGTGAAGGCACGTCTACAGCG GAGGAGAATGGAAGGGACACGCCCAAGCCAATTAGGCGCTCGGCTTCCATGGATTCTCCG TTGTTTGCCGTAGCTCTTCCTGAAGCAAATGATGATGTGGTGCGGTATAATTGCAAGTTG CCAAATCCCCGAGAGATGAAGGTCTTCAGGGCGAAGGAGAAGGAGGCCGCAGGCATTTCT TCGTCCTCGTGTCAGTCAGGCCGGTTCAAGATTGGCAGGTCCATGTCAAGCAGTGGCCAA GGGTTTTTCTTCTCACGGAATGGCCGCTCCAGTGGTGCTGTGCTGCCACTGTGA